| Id Trinity | TRINITY_DN52542_c2_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_507108 |
| Sequence | CGTGGAACACCTTTCTTCTTCGCCACTGTAATTACTCTTATATCCAATATAATATAATAATCATCACAACGTGTTTTCTCTCTCACTAACTTTCTCTCTC TCTCTTCTTTCTCTGTAACGGTTACACTCAACTGTAACCACCACACCTTCAGCTTCAGCATTTAGTTCCCGATATCTTCTTCTAGGGTTTTCAATTTCGA TGCTATGAGTGCTGGCCACCGTAACGCTCCGCCAACTGTGCCGGCGACTCCACCGCCGGAGGAAGAACCATACAACATAATCCCTGTCCACAATCTCCTC GCTGATCACCCTTCCCTCCGCTTCCCTGAAGTCCGCGCCGCCGCCGCCGCTCTCAACGCCGTCGGAGACCTCCGACGACCTCCATTTGCGCAATGGCAAC CACATTTCGATCTTCTCGACTGGCTTGCTCTCTTCTTCGGGTTCCAACGCGACAACGTTCGGAACCAGCGCGAACATATTGTTCTCCACCTTGCCAATGC TCAGATGCGGCTCACTCCGCCGCCGGATAACATTGACACACTCGACGACGCCGTTCTCCGCCCCTTCCGCAAGAAGCTTCTTAAAAATTATACTGAATGG TGCTCATATCTCGGAAAGAAATCGAACATTTGGATCTCCAATAACAGTCACCGCCGTGATTCTGATGATCAGCGCCGTGAGCTTCTCTATGTATCTCTCT ATCTCCTGATTTGGGGCGAGGCGGCAAATCTTCGCTTCGTCCCCGAGTGCATCTGCTTCATCTTCCATAACATGGCAATGGAGCTTAATCGAATTTTGGA AGGTTACATTGATGATAGCACTGGTCAGCCTGTGATGCCTTCGATTTCGGGTGAGAATGCTTTTCTGAATATGGTGATTAAGCCTATTTATGATACAATT AAGCGTGAAGTTGATAGTAGTAGGAATGGAACTGCTCCTCATAGTGCTTGGAGAAATTATGATGATATAAATGAGTATTTTTGGAGTAGAAGATGTTTTG ATAAGCTCAAGTGGCCTATTAATGTTGGGAGCAATTTTTTCATGACGGGTAGTGGTGGGAAGCATGTGGGCAAGACTGGATTTGTAGAGCAGAGATCGTT TTGGAATCTGTTTAGGAGTTTTGATAGGCTGTGGGTGATGCTGATTTTGTTTCTTCAAGCTGCTATAATTGTCGCTTGGGAGGAGAAGACTTATCCCTGG CAGGCTTTGCAAGATAGGTCGGTGCAAGTCAGGGCTTTGACTATAATGTTTACTTGGAGTGGCTTGAGGTTCTTGCAGTCCCTGCTTGATGTCGGGATGC AGTATAGGTTGGTATCCAGGGAGACCATGTGGCTCGGAGTGAGGATGGTGCTGAAAATTATTGTTGCTGCTGGGTGGATTGTTGTGTTTGGTGTGCTTTA TGGTAGGATATGGTCTCAGAGAAATCAGGATAGACGGTGGTCACCGGCGGCAGATAGCCGAGTGGTGAACTTTCTTGAGGCTGTATTTGTTTTCATCATT CCGGAGCTTCTAGCATTAGCCCTCTTTATAATCCCTTTGATTAGAAATCTTGTTGAGAATACAAATTGGAGGATTTTTTACCTGTTATCGTGGTGGTTTC AGAGTAGAATTTTTGTTGGCCGTGGATTGAGAGAAGGGCTTGTGGACAACATTAAGTATACATTGTTCTGGGTTCTTGTGTTGGCCACAAAATTTTGTTT TAGCTACTTCTTACAGGTCAAACCCATGATTGCTTCCACAAAGGCAGTGTTGGACCTTAAGGGTGTTAAATATGAATGGCATGAGTTTTTTCATAACAGT AACCGATTTGCTGCTGGTATACTGTGGCTTCCGGTTGTTTTTGTGTATCTCATGGATATACAGATTTGGTACTCAATATATTCATCTTTTGCTGGGGCAG CTGTGGGGTTATTTGCACACTTGGGTGAGATTCGAAACATGCAGCAGCTGAAATTGAGGTTCCAGTTTTTTGCCAGTGCAATTCAGTTTAATCTCATGCC AGAGGAGCAATTGTTGAATGCAAGAAGACCATTTAAGAGCAAGTTTAATGATGCTATCAACAGGTTAAAGCTCAGGTATGGACTCGGACGACCCTATAAG AAGCTTGAGTCCAACCAGGTTGAAGCGAACAAGTTTGCCTTGATATGGAATGAGATAATTATGTCGTTCAGGGAGGAGGATATCATCTCGGACAAGGAGG TTGAGCTGCTGGAGCTGCCACAGAACTCTTGGAATGTCAGGGTTATCCGTTGGCCATGTTTTCTTCTCTGTAATGAGTTACTGCTGGCACTCAGTCAGGC CAAAGAACTAGTTAATGAAACTGATAAGAAGCTTTCTAGTAAGATATGCAAGAATGAGTACCGACGTTGTGCTGTCGTGGAAGCGTATGATAGTGTCAAG CACTTGCTTCTTGAGATCATCAAACCCAATAGTGAAGAGCATTCGATTGTGACAGTTCTGTTTGTAGAGATTGATCACTCTATCGAGATTGAGAAATTCA CTAGAACATTCAAAACAACTGCACTGCCTCAGCTTCACAACAAGTTGATAAAACTTGTTGAGTTGTTGAACAAGCCCAAGAAAGATCTGAACCTAGTCGT TAATACACTTCAGGCCCTCTATGAGATTGCCACCCGAGATTTTTTCAAGGATGAAAGGAAGATTGATCAGCTAAGGGAGGATGGTTTGGCTCCACGAAAT CCTGCTTCAGGTCTACTTTTTGAGAATGCCATTCATTTGCCTGACACCAAGAATGAGAACTTTTATCGGCAGGTTCGGCGCTTGCACACAATTCTTACCT CCAAGGATTCAATGCAAAACATCCCAATAAATCTAGAAGCTAGGCGGAGGATTGCCTTCTTCAGTAACTCACTTTTTATGAACATGCCCCATGCTCCCCA AGTTGAGAAGATGATGGCTTTCAGTGTTCTAACACCTTACTATAGTGAAGAAGTAGTTTTCAGTAAGGAACAGCTCAGAACTGAGAATGAAGATGGGGTA TCAATCCTGTACTATTTGCAGACTATATATGATGATGAGTGGAAGAATTTTGTGGAGAGAATGCGTAGGGAGGGGATGATGAAAGATAGTGATATATGGA CTGATAAACTTAGAGACTTGAGGCTCTGGGCATCCTACAGCGGCCAGACATTATCCCGGACAGTGAGAGGGATGATGTACTACTATCGGGTTCTCCAGAT GTTGGCGTTTCTGGATTCTGCATCAGAAATGGATATTCGAGAAGGCGCACGGGAACTTGTTCCAATGAGGCTTGACAGTTTAGACGGTTTCAACTCTGAA AAGTCACCTCCCTTTCGAAGTTTAAGTAGAGCAAGTAGCTCAGCAAGGTTGTTATTCAAAGGCCATGAGAATGGGACTGCTCTAATGAAATTCACATATG TGATTGCCTGCCAGATATATGGAACTCAGAAAGCAAGGAAGGATCCACATGCTGATGAAATTTTGTATCTAATGAAAAACAATGAAGCCCTACGTGTTGC CTATGTTGATGAGGTTTCCACTGGGAGGGATGAGAAGAAGTATTACTCAGTTCTTGTTAAGTATGACCAACAATTGGAGAGGGAGGTGGAAATATACCGC GTAAAGTTGCCTGGTCCCTTGAAACTAGGAGAAGGAAAGCCAGAAAATCAAAATCATGCCATCATCTTCACTCGTGGTGATGCGGTTCAGACTATTGATA TGAACCAGGACAACTACTTTGAGGAAGCACTTAAAATGCGGAATCTCTTGGAAGAATACAAGTATCACTATGGTATTAGGAAACCTACTATTTTGGGAGT GAGGGAACACATTTTTACAGGTTCTGTTTCCTCCCTTGCTTGGTTCATGTCAGCTCAGGAAACCAGCTTTGTCACCTTAGGCCAGAGGGTTTTAACAAAT CCTTTGAAAATTAGATTGCATTATGGCCACCCTGATGTGTTTGACAGGTTTTGGTTCTTGACTCGAGGTGGTCTCAGTAAAGCTTCCAGAGTGATCAACA TAAGTGAGGACATATTTGTTGGCTTTAACTGTACTCTTCGTGGCGGTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_193575; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_507108
| Blastp | Callose synthase 12 from Arabidopsis with 72.98% of identity |
|---|---|
| Blastx | Callose synthase 12 from Arabidopsis with 74.06% of identity |
| Eggnog | synthase(ENOG410XQ8V) |
| Kegg | Link to kegg annotations (AT4G03550) |
| CantataDB | Link to cantataDB annotations (CNT0001755) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449022.1) |
| Pfam | 1,3-beta-glucan synthase subunit FKS1, domain-1 (PF14288.5) |
| Rfam | snoJ33 (RF00315) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |