Ll_transcript_507115

• Id Trinity: TRINITY_DN52542_c2_g1_i9
• Name Transcript: Ll_transcript_507115
• Sequence: CGTGGAACACCTTTCTTCTTCGCCACTGTAATTACTCTTATATCCAATATAATATAATAATCATCACAACGTGTTTTCTCTCTCACTAACTTTCTCTCTC TCTCTTCTTTCTCTGTAACGGTTACACTCAACTGTAACCACCACACCTTCAGCTTCAGCATTTAGTTCCCGATATCTTCTTCTAGGGTTTTCAATTTCGA TGCTATGAGTGCTGGCCACCGTAACGCTCCGCCAACTGTGCCGGCGACTCCACCGCCGGAGGAAGAACCATACAACATAATCCCTGTCCACAATCTCCTC GCTGATCACCCTTCCCTCCGCTTCCCTGAAGTCCGCGCCGCCGCCGCCGCTCTCAACGCCGTCGGAGACCTCCGACGACCTCCATTTGCGCAATGGCAAC CACATTTCGATCTTCTCGACTGGCTTGCTCTCTTCTTCGGGTTCCAACGCGACAACGTTCGGAACCAGCGCGAACATATTGTTCTCCACCTTGCCAATGC TCAGATGCGGCTCACTCCGCCGCCGGATAACATTGACACACTCGACGACGCCGTTCTCCGCCCCTTCCGCAAGAAGCTTCTTAAAAATTATACTGAATGG TGCTCATATCTCGGAAAGAAATCGAACATTTGGATCTCCAATAACAGTCACCGCCGTGATTCTGATGATCAGCGCCGTGAGCTTCTCTATGTATCTCTCT ATCTCCTGATTTGGGGCGAGGCGGCAAATCTTCGCTTCGTCCCCGAGTGCATCTGCTTCATCTTCCATAACATGGCAATGGAGCTTAATCGAATTTTGGA AGGTTACATTGATGATAGCACTGGTCAGCCTGTGATGCCTTCGATTTCGGGTGAGAATGCTTTTCTGAATATGGTGATTAAGCCTATTTATGATACAATT AAGCGTGAAGTTGATAGTAGTAGGAATGGAACTGCTCCTCATAGTGCTTGGAGAAATTATGATGATATAAATGAGTATTTTTGGAGTAGGAGATGTTTTG ATAAGCTCAAGTGGCCTATTAATCTTGAGAGCAATTTTTTCGTGACTGGTAGTGGTGGAAAGCATGTCGGTAAGACTGGATTTGTGGAGCAGAGGTCGTT TTGGAATCTGTTTAGGAGTTTTGATAGGCTCTGGGTGATGCTGATTCTGTTTCTTCAAGTTGCTATAATTGTGGCTTGGGAGGAGAAGACTTATCCCTGG CAGGCTTTGCAAGATAGGACTGTACAAGTCAGGGCTTTGACTATTATGTTTACTTGGAGTGGCTTGAGGTTTGTGCAGTCTTTGCTCGATTTAGGGATGC AGTATAGGTTGGTTTCCAGGGAGACCATGTTGCTTGGGGTGAGGATGTTTCTGAAAATTATCGTTGCTGCATGGTGGATTGTTGCCTTTGCTGTGCTTTA TGGCAGGATATGGTCTCAGAGAAACCATGATAGACGGTGGTCAGAAGAAGCAAATAGGCGGGTGGTGAATTTTTTGGAGGCGATTGCTGTTTTCGTCATC CCAGAGCTTCTAGCATTAGCCCTTTTTATAATACCTTGGATTAGAAATTTTGTTGAGAATACAAATTGGAGGATTTTTTACCTGTTATCGTGGTGGTTTC AGAGTAGAATTTTTGTTGGCCGTGGATTGAGAGAAGGGCTTGTGGACAACATTAAGTATACATCGTTCTGGGTTGCTGTGTTGGCCACAAAATTTTGCTT CAGCTACTTCTTACAGGTCAAACCCATGATTGCTCCCACAAAGGCAGTGTTGGCACTTAAGGATGTTAAGTATCAATGGCATGAGTTTTTTCAAAACAGT AACCGATTTGCGGCTGTTTTACTGTGGATTCCGGTTGTGTTGGTGTATCTGATGGATATACAAATTTGGTATTCAATATATTCATCTTTTGTTGGGGCGG CTGTGGGGTTGTTTGCACACTTGGGTGAGATTCGAAACATGCAGCAGCTGAAATTGAGGTTCCAGTTTTTTGCCAGTGCAATTCAATTTAATCTCATGCC GGAGGAGCAATTGTTGAATGCAAGAGGAACATTGGCGAGCAAGTTTAGAAATGCCATCCACAGGTTAAAGCTCAGGTATGGACTCGGACGGCCCTATAAG AAGATTGAGTCTAACCAGGTTGAAGCCAACAAGTTTGCTTTGATATGGAATGGAATAATTATGTCGTTCAGGGAGGAGGATATCATCTCTGACAAAGAGG TTGAGCTGCTGGAGCTACCACAGAACTCTTGGAATGTCAGGGTTATCCGGTGGCCATGTTTTCTTCTCTGCAATGAGTTACTGCTGGCACTCAGTCAGGC CAAAGAACTAGTTAATGAAACTGATAAGAAGCTTTTTAATAAGATATGCAAGTATGAGTACCGACGCTGTGCTATCATCGAGGCATATGATAGTGTCAAG CACTTGCTTCTTGAGATCATCAACACCAATAGTGAAGAGCATTCTATTGTAACAGTTCTGTTTCAAGAAATTGATCACTCTCTTGAGATTGAGAAATTCA CTAGAACATTCAAAACGACTGCACTGCCTCTGCTCCACAACAAGTTGATAAAGCTTGTTGAGTTGTTGAACAAGCCCAAGAAAGATCTGAACCTAGTCGT GAATACTCTCCAGGCCCTTTATGAGATTGCTACCCGAGATTTTTTCAATGACGAAAGGAAGATTGATCAGCTAAGGGAGGATGGTTTAGCTCCACGCAAT CCTGCTTCAGGTCTACTTTTTGAGAATGCTGTTCTGTTGCCTGACACCAACAATGTGAACTTCTATCGGCAGGTTCGGCGCTTGCACACAATTCTTACCT CCAAGGATTCAATGCAAAACATCCCAATAAATCTAGAAGCTAGGCGTAGGATTGCCTTCTTCAGTAACTCTCTTTTTATGAAAATGCCCCGTGCTCCCCA AGTTGAGAAGATGATGGCTTTCAGTGTTCTAACACCTTACTATAGTGAAGAAGTAGTTTTCAGTAAGGAACAGCTCAGAACTGAGAATGAAGATGGGGTA TCAATCCTGTACTATTTGCAGACTATATATGATGATGAGTGGAAGAATTTTGTGGAGAGAATGCGTAGGGAGGGGATGATGAAAGATAGTGATATATGGA CTGATAAACTTAGAGACTTGAGGCTCTGGGCATCCTACAGCGGCCAGACATTATCCCGGACAGTGAGAGGGATGATGTACTACTATCGGGTTCTCCAGAT GTTGGCGTTTCTGGATTCTGCATCAGAAATGGATATTCGAGAAGGCGCACGGGAACTTGTTCCAATGAGGCTTGACAGTTTAGACGGTTTCAACTCTGAA AAGTCACCTCCCTTTCGAAGTTTAAGTAGAGCAAGTAGCTCAGCAAGGTTGTTATTCAAAGGCCATGAGAATGGGACTGCTCTAATGAAATTCACATATG TGATTGCTTGCCAGATATATGGAACTCAGAAGGCAAAGAAGGATCTTCGCGCTGATGAAATTTTGAGTCTAATGGAAGAAAATGAAGCCCTTCGAGTTGC CTACGTTGATGAGAAAACCACTGGAAGGGACGAGAAGGAGTATTACTCTGTTCTTGTTAAGTATGACCAACAACTACAGAGGGAGGTGGAAATATACCGT GTAAAGTTGCCTGGTCCCTTGAAGCTTGGAGAGGGAAAGCCAGAAAATCAAAATCATGCTTTCATCTTCACTCGTGGTGATGCAGTTCAGACTATTGATA TGAACCAGGACAACTACTTTGAGGAGGCACTTAAAATGCGGAATCTCTTAGAAGAGTACAAGCATAACTATGGCTCCCGGAAACCTACTATTTTGGGAGT TAGGGAACATATTTTTACTGGTTCTGTTTCCTCTCTTGCTCGGTTCATGTCTGCTCAGGAAACAAGTTTTGTCACTTTAGGACAAAGGGTCTTGGCAAAT CCTTTGAAAGTTAGAATGCATTATGGTCATCCAGATGTGTTTGACAGGTTTTGGTTTTTAACTCGTGGTGGCGTCAGTAAAGCTTCCAGGGTGATCAACA TAAGTGAGGACATTTTTGCTGGCTTTAATTGTACTCTTCGTGGAGGTAATGTCACTCACCATGAATACATTCAGGTCGGAAAGGGAAGAGATGTTGGGTT GAATCAAGTATCAATGTTTGAAGCAAAGGTTGCCAGTGGAAATGGGGAACAAGTCCTAAGCAGAGATGTGTACAGATTGGGTCATAGGCTGGATTTTTTC AGGATGTTGTCATTCTTCTATACCACAGTGGGATTCTTTTTCAACACAATGATGGTAGTTCTTACTGTATATGCATTTTTATGGGGACGACTATTTCTTG CTCTGAGTGGTGTTGAAAATGCTATGGAAAGTAACAGCAATAATAATAAAGCACTTGGTACCATCTTGAATCAGCAGTTCCTAGTCCAACTTGGAATTTT CTCTGCCCTTCCC
• Tissue: pods
• Gene name: LI_gene_193575;
• Additional information: details;

Expression of Ll_transcript_507115

FPKM

• PAB: 0.3
• PNAB: 1.8
• PS1: 10.3
• PS2: 1.4
• PS3: 3.1
• PW1: 1.1
• PW2: 0.8
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_507115

• Blastp: Callose synthase 12 from Arabidopsis with 73.28% of identity
• Blastx: Callose synthase 12 from Arabidopsis with 74.27% of identity
• Eggnog: synthase(ENOG410XQ8V)
• Kegg: Link to kegg annotations (AT4G03550)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413240.1)
• Pfam: 1,3-beta-glucan synthase subunit FKS1, domain-1 (PF14288.5)
• Rfam: snoJ33 (RF00315)
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;