Ll_transcript_507455

• Id Trinity: TRINITY_DN52544_c1_g4_i4
• Name Transcript: Ll_transcript_507455
• Sequence: CGAGAGAATGAGCAGCTATCCAAGTATGGTGACACCAAAACCGCACGAGGTATCATGTTGATAGAGCTAAAAAAGCTCATCGATGCAAATCCTCTCTTCC GTGATAAGCTTGTCTTCCCCAGTCTCAAGTCCTCAAGATTGAGGACTTTAATCAATCAAAGTTTGAACTGGCAGCACCAGCTTTGCAAAAACCCAAGGCC AAACCCAGATATTAAGACTTTATTCACAGATCACTCATGTACATCCTCTAATGGTCCTTTGGCACCTACACCTGTCAATCTTCCGATATCCGCAGTTGCA AAGCCTGCTGCTTATACTTCACTTGGAGTTGGAGCTCACGGCCCCTTTCCACCTGCTGCTGCACCTGCTAATGCTAATGCATTGGCTGGTTGGATGGCCA ATGTCTCAGCTTCATCATCTGTCCAAGCAGCTGTTGTCTCAGCATCTACCATACCAGCCCCACAAAATCAAGTGTCTATCTTGAAACGTCCTAGAACTCC TCCAACAACTCCTGGGATGGTTGATTATCAAAATGCTGATCATGAACAGCTAATGAAAAGATTTCGGCCTGGTCATTCTGTTGAGGAGGTTTCCTATCCT TCAGCTCGACAAGTCTCTTGGTCGCTAGATGATCTCCCAAGAACGGTGGCAATGACTTTGCATCAAGGATCCTCTGTAATAAGCATGGATTTTCATCCTT CTCACCACACCTTACTTCTTGTTGGTTCTAATAATGGTGAAATCACCCTCTGGGATCTCAGTTTGCGAGAAAAGTTGGTTTCAAAGCCATTCAAGATATG GGATATGCAGTCATGCTCATTGCCATTTCAGGCAGCTGTGGTTAAAGATGCACCTATTTCTGTCAGCCGTGTCACTTGGAGCCCTGATGGGAATTTTGTG GGTGTTGCTTTTACTAAACATTTGATTCACTTATATGCCTATACTGGATCAAATGATCTAGCCCAACGTATAGAGGTTGATGCCCATATTGGTGGCGTGA ATGACTTGGCATTTGCCCATCCAAATAAGCAACTTTGTATCGTGACTTGTGGAGATGATAAGTTGATAAAGGTGTGGGATTTAACTGGACGAAGGCTATT TAACTTCGAGGGGCATGACACACCTGTATATTCTATTTGTCCTCACCACAAGGAGAACATCCAGGTACTAACTTTTGAAGGTTGATGGTCTGTTGCTCTA TAATTTTATCCTTCTCGGTCATAGTCACATAATTTGGCTTATACCACGAACTAGTTTATGAGAACCCATTCACGGTTCTTCTATGTTTTGCACAGTTCCG AAAGGTAGATAGAAGATGGAAATCCTTATAGTTAATATAACAATTAATGAGCATAACAAATAGGACAACTGCATCAAAATATGGAATCATTTATTAATTT ATATATGAAATAAGGAACTAAAAATATATGTAAATGTTCATAAACACGGAAATGGTTGATATTCATACTTAATTAAAAATCTGAAATAAAAGATGGAAGA ACCCTTACTAATATAATGATTAATAATTAATGTGCATAGAAATAAAAAATACAGTGCCCGAAAATAAGGGGCTTGATTATATATGAAAAACATGTTATAT ATTATTTTTAATAATTGATTATGTATGTTTCGATCTGCGATATGTTTCTATTCACGATTCATAAAATAGGCCTTCTGATATGTGATTCAATTACCGATTT AATAAGCATGGACTGCTTGCTTCTCAGTAGCATTGGCAGAACACAAGTCTCCAATTCTAGTATGTCTAGTTCTTGAACAGGTAGGACCATGGTATGCTTA TACGATTGCTACTGCATCCTTCCACCTCTTGTTGCATTGTTGATGATATTATCTCATCTGCATTGTGTACACCATGAATAAGTCTATTTGCCTCCTTCGT TATATGATCTTCTAGCATTTATGGTGCTCTGTGTTGGGCTCGGGTTAGAAGTTAAGAAAATATCGTATTTTGGTTGCAAACATGTTATCAAGTATTTTCT TGGAAAACAATCATGCCATAAGTTCCCATGCTAATCAAGATGGAAAATTCCGATTTTCATACTGTACCATCTTTCTAGTACCAATTTCCATTCCTCACCT CCATTATTTATTTTAGTTTTATGAAGCCCGAGGTTTTTTTTTGTGTTTATGTGAAGATACTTTCTGATTGTATTGTTCTTGTAAACTCTGCCTCCAAAGG CCCTAAAGGTTGTTATTGTAACTTCGCAGTTCATATTTTCAACTGCCATAGATGGCAAAATAAAAGCCTGGTTATATGATAACATTGGTTCTAGGGTTGA CTATGATGCTCCTGGTCACTG
• Tissue: pods
• Gene name: LI_gene_193597;
• Additional information: details;

Expression of Ll_transcript_507455

FPKM

• PAB: 0.6
• PNAB: 0
• PS1: 1.2
• PS2: 1
• PS3: 0.8
• PW1: 1.1
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_507455

• Blastp: Topless-related protein 3 from Arabidopsis with 71.58% of identity
• Blastx: Topless-related protein 3 from Arabidopsis with 69.31% of identity
• Eggnog: Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein- mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for(ENOG410XP3K)
• Kegg: Link to kegg annotations (AT5G27030)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452264.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;