Ll_transcript_507464

• Id Trinity: TRINITY_DN52544_c2_g2_i4
• Name Transcript: Ll_transcript_507464
• Sequence: CGAACCCATCCCTTTGAACTCGGTATCCGTGATTATGATGTTTAAGTTGCTGCCATGATATACTAGTCACACCTTAACAATTAGAAAGTAATGTTCAAGT ACTATTATACATGTTCATTTTCTTCTTCAAACATGCACACACAATCTTGTAGCACTTGGTTGATCTTTTTCTTCTTGTGTGCTAAATTCCGTTATGCTAA GTCCTCATATGCCACGGATTCTCTTTTGGGTACCTTTATCATTTGATGTCTGTATTTCTTAGTGGAATCGCTTGGTTAATTGGTTTTTTACTTTTTGTGT ACGTTACTTAATTATTCATGAATTTAGTACTAGATCTTTATATTTGTTTGCAACCCATTGATTGGCTTTGGCATTTCTAATGAAGAATGGAGTTGATCCC ATGGGTCGAAATGTGGAGAAACCAAGAATTGTGGAAGATGTAATAGATAGACCTAAACCATGGCAGCTGTCTGAAATTGTGGATCCGGTTCAATGTCGAT TAGCTGCCATGCCTGACAACGTAGATTCTTCCACCAAGGTGGTTCGACTTCTATATACGAATTCTGGTGCTGGTCTTTTGGCACTTGACTCAAATGGTGT TCAGAAGCTATGGAAGTGGTATCGCAATGAACAGAATCCCACTGGAAAGGCGACTGCTAGTGTTGTCCCACAACATTGGCAACCCAGCAATGGTCTTCTT ATGGCAAATGATATCTCAGGAGTTAAACTTGATGAAGCCGTTCCTTGCATTGCACTCTCAAAGAACGATTCGTATGTTATGTCTGCCTGTGGCGGAAAGG TTTCATTATTTAACATGATGACATTCAAGGTGATGACAACATTCATGCCACCACCTCCTGCCTCTACCTATCTAGCTTTTCACCCTCAGGATAACAATAT CATAGCCATTGGAATGGAGGATTCAACCATTCACATTTATAATGTTAGAGTGGATGAGGTGAAATCAAAATTGCGGGGCCACCAGAAGCGTATTAGCGGT TTAGCCTTTTCAACCAATCTTAACATCCTGGTTTCCTCTGGTGCTGATGCTCAACTCTGTGTGTGGAGCATTGATTCATGGGAGAAAAGGAAATCAGTTC CATTACAACTACCGGCTGGAAAGGCGCCTGTTGGTGACACTCGAGTGCAGTTCAATACCGACCAAATTCGCTTGTTGGTAGCCCACGAGACTCAGTTGGC AATATACGATGCCTCGAAGATGGAACGCATTCAGCAGTGGGTTCCACAAGATGTTCTGCCTGCTCCAATATCAAATGCATGTTATTCTTGCAACAGTCGA TTAATATACGCTACATTTTCTGATGGAAACACTGGGGTTTTCGATGCTGATAGCTTGCGACTAAGATGTCGTATTGCGTTGTCAGTGTACTTGTCACCAA CTGCTTTAAATGGAAGCCAAGGTGTGTATCCTGTTGTTGCTGCAGCTCATCCACTAGATCCAAACCAATTTGCAGTTGGTTTGAGTGATGGGTCAGTGAA AGTGATAGAGCCAATTGAATCAGAGGGAAAGTGGGGAACTAATCCACCTTTGGATAATGGAATAGGTAGGACTGCATCATCATCTACAACAAGCAACCAT ACAACAGATCAGTCTCAAAGATAAGGACATTCATTATATCATATTATACCATGTTTTGTAATTTTATAAGCCTAGATTGTTTTTAGTTTTCATTACCCTC CATTTGTAGGGTCTTTGCTCAGTTTGGACATAAAATGATAAATGTTTAGGTGCAAACTTTTGTATACCTACATTTGTTCTATACAAGTCAGTTACATTAT TTATATTTTGTTGGAGGGTTGATGTTTTTTTATTGCTGACAATGTCAATTTGTCTATTCTCCTCACATTTGTTGAGATGAAATATGTGTCACATGACTAT TATATATTGTGGTGCTTAGGAAAATATGAATAGGGTGAGTTTGACTGATCGGTAAGATTGTTGCTTAGTGAGTATGACTATGGATTCAAATTTTGAAAAT AATCTCTCCACTTGTGTATGTAAGGTTGTGCAATTTTC
• Tissue: pods
• Gene name: LI_gene_193600;
• Additional information: details;

Expression of Ll_transcript_507464

FPKM

• PAB: 10.2
• PNAB: 10
• PS1: 17.7
• PS2: 9.1
• PS3: 13.6
• PW1: 9.3
• PW2: 10
• PW3: 9.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_507464

• Blastp: Protein TPR1 from Oryza sativa with 71.81% of identity
• Blastx: Protein TPR1 from Oryza sativa with 72.59% of identity
• Eggnog: Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein- mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for(ENOG410XP3K)
• Kegg: Link to kegg annotations (4327709)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440603.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;