Id Trinity | TRINITY_DN52545_c0_g1_i12 |
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Name Transcript | Ll_transcript_505847 |
Sequence | AGGCAATGTCACGAGAGAGAGAAAGAAAGAAAGAAAAGAAAGGGTACTGAGTCGAAAGCTAAACTCAGTGTTTCTTCATTCTCCAACTCGTCACTCACTC ACTCGCTCACTCGCTCGCTCACTCGCTCACTCACTACTCAGTAGGGTTTATCTCTCTCTCTCTCTCTTTATCTTTTTAACTTCAATCTCTAGAGAGAGAA AGTCATGGATGCTTATGCTTTGCACCTTGCCATGGCGGCACTCGTTGGAGCTTCCGCCGTCGCAATTTCCGCTTACTTCCTCCACCGCAAGACGCTATCG CAGATACTCGAGTTCGCACGCGCCGTCGAAGGCGATGAAACCAAACATGACGTCGACGTTGTTGATTCTTCGCCGAAGAGGCATTTCAGGAAGCACCTTA TCGCTAGGAAGAAGGGGAATGGTTATTACCGGAGATTCTCGACGTCGTTGCCGGATGTTACGGTGATTTCCGGTGGCGGCGAGGTGGATTCCGTTGAAGG GATTCCGGCTGGGTTGCCGAGGTTGCATATGCTCCGTGAAGCAAAGTCTGCACATCCTGGTACTCCGAAAAGAAATATATTGAGAGCAATTTCTCCCAAG TCTCCTGCTGTGAATGCTAGTGCCTTTGACAGTGTAGAAGAATCAGATGATGATATTGCTGACAATGCTGAATTGGATACTACATATCTGCACACAAATG GAGATGTTGGGCCAGAAAGTAAGAACATATATGAGACTTTACCTGATCACGTTAATGCTAATGAAGACAAGATACAGCTTACTGCTTCAACAAGTATGAT CCGGTCTCATAGTATTTCTGGTGATTTGCATGGCGTGCAGCCTGATCCAATTGCAGCTGACATTCTTAGGAAGGTGCCAGAGCATGAAACTTTTGTTCGG CTTGAAGTTACACCTCTTGAGGGCCCGTCACCTGATGAAGTGGAAGCCTATGTTGTTCTTCAAGAATGCCTTGAAATGAGAAAGAGATACTTGTTTAGAG AAGCAGTTGCTCCATGGGAGAAAGAAGTTATATCTGACCCCTGCACACCAAAGCCTAACCCAGATCCATTCTTTTTTGCTCCTGAAGGGAAGTCTGATCA CTACTTTGAAATGCAAGATGGGGTGATTCATGTATATCCAAATAAAGACTCAAATGAGGAGCTTTTCCCTGTAGCAGATGCAACTACCTTTTTCACTGAC CTCCATCACATACTCCGAGTCATAGCGGCAGGGAATATAAGAACTTTATGCCACTATCGGCTTAATCTTCTAGAACAAAAATTCAACCTTCATTTGATGC TAAATGCGGATAGGGAATTTCTCGCCCAGAAAAGTGCTCCACATCGAGACTTCTACAATGTCAGGAAAGTTGATACACACGTCCACCACTCAGCATGCAT GAATCAGAAACATCTTTTAAGGTTTATAAAGTCAAAGCTAAGGAAAGAGCCTGATGAGGTTGTAATATTTCGAGACGGGACATATCTGACTTTGAAGGAA GTTTTTGAGAGTCTGGATTTGACTGGATATGACCTCAACGTTGACCTTTTGGACGTTCATGCAGACAAGAGTACATTTCATCGCTTTGACAAATTCAATC TGAAGTACAATCCTTGTGGTCAGAGTAGGCTCAGGGAGATATTCCTAAAGCAGGATAATCTTATTCAAGGTCGTTTCCTGGGTGAACTGACAAAGCAAGT GTTTTCTGATCTTGAAGCCAGTAAATATCAGATGGCTGAGTATAGAATATCAATATATGGTAGAAAGCAAAGTGAGTGGGACCAGCTAGCTAGTTGGATA GTGAATAATGAATTGTACAGTGAGAATGTTGTTTGGTTGATTCAGCTTCCAAGGTTATACAATGTGTACAAAGAAATGGGTATTGTGACCTCATTCCAGA ACATCCTTGATAACATCTTCATTCCACTTTTTGAGGTTACTGTGGACCCCGATTCACATCCCCAGCTTCATGTTTTCCTGAAACAGGTTGTTGGGTTGGA TTTGGTGGATGACGAAAGCAAACCTGAAAGAAGGCCAACAAAACACATGCCTACACCGGCTCAATGGACTAACGTATTCAATCCTGCATTTTCGTACTAC GTCTATTACTGCTATGCAAACCTTTACACCTTAAACAAGGTAGCTGTTTCTTGAACACCGCTCTATACTTTTGTCAAGTTTTGTTTAGATGTTCACTCCA CCACCTAAGAAAATAGACACTCTTTGTTATTAAGGGGAAATGGTTAAAATGAAAATTGACATGGAGTGGGTTTCTTCCTAGCCATGTACTATGTAGTTAT AAGATTTCTCTCTATCATATAATCTCAAGACCATCAGTCTGTATATTCCATGAGTTGCTTACTTCTTTACCCAGTCAACCATATATTGCCTTAAACATGT ATACCAAGATTTCTCCTCTTCTTACTTCATAACTATTATCTGATTCTTGAATTCATTGATATACCAATGTTTGACTGAATATAAATATTTCCTCAGCTTC GTGAATCCAAGGGAATGACAACAATCAAATTCCGTCCTCACTCTGGAGAGGCTGGTGACATTGACCACCTTGCTGCCACCTTTCTTACGACTCATAACAT TGCACACGGAATCAATTTGAGGAAGTCTCCTGTGCTTCAATATTTGTATTATCTTGCTCAGGTATCCTCCATTTTACAACTGCGTTATAAGTTGTGATAT TTGCAGTGACTAATTGATTGTGGAATATGTTAGATTGGGCTTGCAATGTCTCCTCTTAGCAATAACTCTCTATTCTTAGACTACCATCGGAATCCTTTAC CAGTGTTCTTCTCACGGGGTTTGAATGTTTCACTCTCTACTGATGATCCACTCCAAATTCACTTAACAAAGGAACCACTGGTCGAGGAATATAGCATAGC TGCTTCTGTATGGAAGTTGAGCGCATGTGATTTATGTGAGATTGCCCGTAACTCAGTTTATCAGTCAGGTTTCTCACATGCCTTAAAGTCACATTGGATT GGCAAGGAGTATTACAAGAGAGGGCCAAATGGAAATGACATTCACAGAACAAATGTCCCTCACATCCGGTTGGAATTCCGAGACATGATTTGGAGAGAGG AGATGCAACAGGTTTATTTGGGCAAAGCCATCATTCCTGAAGATATAGACAAATAATATGCCTGAGGCATTTACTTCATCCATACTTGAAATATCAGACT TGTAAACAGCTTGACAATGAATTTCACATACCGACTCAGCATCAGGGATGGCATCTGAGAACCCTATTTAATGGCGAGCCTCGCAATAACTAGGCTGATT ACATCACAAGATTTGTTTGAGAATATGGACCTGATACAATAGTATATCCCACGCGACATGACCACGTAGCTGGAGCATAGATCAAGGCGCCGGGTTAGCA AAAATAATTTTGATCATAGCAAATGAAGCATGTTGCATTTAGATATATAATTATATTATCCATACCCTTAAAAGAGAGAAGAAATTAGTTCTCTCAAATT TTGATTCCTATTGTTTGTCAATATGGCATTGAATGATGAAGAATAGCCCTCAGTCTTGGCATGCATGCTTCAGGATGAAATGGGCATTAGATAGTGAGTT AAGTTGATACTGAATGATCCATTTTATGTAACAATTGGCTTTCATGTACACAAATTCTTTATCATATACAATTTATTTATAAGTATTCTGTAACAAGCAT TGCTAAATTGCAATAAATATTGTTTGTGATAGTAGAACTAGCACTGTGATATCCTAAGCTATTTATATACTGTGTAACCTATACATCTTGCAAAAAAG BLAST |
Tissue | pods |
Gene name | LI_gene_193602; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_505847
Blastp | AMP deaminase from Arabidopsis with 73.19% of identity |
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Blastx | AMP deaminase from Arabidopsis with 73.95% of identity |
Eggnog | adenosine deaminase(COG1816) |
Kegg | Link to kegg annotations (AT2G38280) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413657.1) |
Pfam | Adenosine/AMP deaminase (PF00962.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |