Ll_transcript_505856

• Id Trinity: TRINITY_DN52545_c0_g1_i17
• Name Transcript: Ll_transcript_505856
• Sequence: AGGCAATGTCACGAGAGAGAGAAAGAAAGAAAGAAAAGAAAGGGTACTGAGTCGAAAGCTAAACTCAGTGTTTCTTCATTCTCCAACTCGTCACTCACTC ACTCGCTCACTCGCTCGCTCACTCGCTCACTCACTACTCAGTAGGGTTTATCTCTCTCTCTCTCTCTTTATCTTTTTAACTTCAATCTCTAGAGAGAGAA AGTCATGGATGCTTATGCTTTGCACCTTGCCATGGCGGCACTCGTTGGAGCTTCCGCCGTCGCAATTTCCGCTTACTTCCTCCACCGCAAGACGCTATCG CAGATACTCGAGTTCGCACGCGCCGTCGAAGGCGATGAAACCAAACATGACGTCGACGTTGTTGATTCTTCGCCGAAGAGGCATTTCAGGAAGCACCTTA TCGCTAGGAAGAAGGGGAATGGTTATTACCGGAGATTCTCGACGTCGTTGCCGGATGTTACGGTGATTTCCGGTGGCGGCGAGGTGGATTCCGTTGAAGG GATTCCGGCTGGGTTGCCGAGGTTGCATATGCTCCGTGAAGCAAAGTCTGCACATCCTGGTACTCCGAAAAGAAATATATTGAGAGCAATTTCTCCCAAG TCTCCTGCTGTGAATGCTAGTGCCTTTGACAGTGTAGAAGAATCAGATGATGATATTGCTGACAATGCTGAATTGGATACTACATATCTGCACACAAATG GAGATGTTGGGCCAGAAAGTAAGAACATATATGAGACTTTACCTGATCACGTTAATGCTAATGAAGACAAGATACAGCTTACTGCTTCAACAAGTATGAT CCGGTCTCATAGTATTTCTGGTGATTTGCATGGCGTGCAGCCTGATCCAATTGCAGCTGACATTCTTAGGAAGGTGCCAGAGCATGAAACTTTTGTTCGG CTTGAAGTTACACCTCTTGAGGGCCCGTCACCTGATGAAGTGGAAGCCTATGTTGTTCTTCAAGAATGCCTTGAAATGAGAAAGAGATACTTGTTTAGAG AAGCAGTTGCTCCATGGGAGAAAGAAGTTATATCTGACCCCTGCACACCAAAGCCTAACCCAGATCCATTCTTTTTTGCTCCTGAAGGGAAGTCTGATCA CTACTTTGAAATGCAAGATGGGGTGATTCATGTATATCCAAATAAAGACTCAAATGAGGAGCTTTTCCCTGTAGCAGATGCAACTACCTTTTTCACTGAC CTCCATCACATACTCCGAGTCATAGCGGCAGGGAATATAAGAACTTTATGCCACTATCGGCTTAATCTTCTAGAACAAAAATTCAACCTTCATTTGATGC TAAATGCGGATAGGGAATTTCTCGCCCAGAAAAGTGCTCCACATCGAGACTTCTACAATGTCAGGAAAGTTGATACACACGTCCACCACTCAGCATGCAT GAATCAGAAACATCTTTTAAGGTTTATAAAGTCAAAGCTAAGGAAAGAGCCTGATGAGGTTGTAATATTTCGAGACGGGACATATCTGACTTTGAAGGAA GTTTTTGAGAGTCTGGATTTGACTGGATATGACCTCAACGTTGACCTTTTGGACGTTCATGCAGACAAGAGTACATTTCATCGCTTTGACAAATTCAATC TGAAGTACAATCCTTGTGGTCAGAGTAGGCTCAGGGAGATATTCCTAAAGCAGGATAATCTTATTCAAGGTCGTTTCCTGGGTGAACTGACAAAGCAAGT GTTTTCTGATCTTGAAGCCAGTAAATATCAGATGGCTGAGTATAGAATATCAATATATGGTAGAAAGCAAAGTGAGTGGGACCAGCTAGCTAGTTGGATA GTGAATAATGAATTGTACAGTGAGAATGTTGTTTGGTTGATTCAGCTTCCAAGGTTATACAATGTGTACAAAGAAATGGGTATTGTGACCTCATTCCAGA ACATCCTTGATAACATCTTCATTCCACTTTTTGAGGTTACTGTGGACCCCGATTCACATCCCCAGCTTCATGTTTTCCTGAAACAGGTTGTTGGGTTGGA TTTGGTGGATGACGAAAGCAAACCTGAAAGAAGGCCAACAAAACACATGCCTACACCGGCTCAATGGACTAACGTATTCAATCCTGCATTTTCGTACTAC GTCTATTACTGCTATGCAAACCTTTACACCTTAAACAAGCTTCGTGAAATGAAGGGAATGACAACAATCAAATTCCGCCCTCACTCTGGAGAGGCTGGTG ATATTGACCACCTTGCTGCAACCTTTCTTACGGCTCATAACATTGCACATGGAATCAATTTGAGAAAGTCTCCCGTGCTGCAATATCTGTATTATCTTGC TCAGATTGGGCTTGCAATGTCTCCTCTTAGCAATAACTCTCTATTCTTAGACTACCATCGGAATCCTTTACCAGTGTTCTTCTCACGGGGTTTGAATGTT TCACTCTCTACTGATGATCCACTCCAAATTCACTTAACAAAGGAACCACTGGTCGAGGAATATAGCATAGCTGCTTCTGTATGGAAGTTGAGCGCATGTG ATTTATGTGAGATTGCCCGTAACTCAGTTTATCAGTCAGGTTTCTCACATGCCTTAAAGTCACATTGGATTGGAAAGGAGTATTACAAGAGAGGGCCAAA TGGAAATGACATTCATAGAACAAATGTTCCCCACATCCGGTTGGAATTCCGAGACACGATTTGGAGAGAGGAGATGCAACAGGTTTATTTGGGCAAAGCC ATCATTCCCGAAGAAGTAGACAAATAATATACCCCAGACTTTTCCTTTTGCAAACAGGTTCTATTTCCTTTCTTTCTTTCGATTTTAATATTCGCATTTC GCCATTTCTCTCGTCATCCATAGATGAATGATTGATTTAAAATGCCCTTCCCTTGTAGGATGAAAGTGAATTTCACATACCCACCCATCGTCATGGAGGG TTTCTAAGACCCCTATTTAATAGAGAGACTTGTAATAATTATGGCTCAACACTTAACAAAATTGGTTTAAGGATATGGAGCTGATAAATACTATATATCT CACATGACCATTTAGCTGGAGCATGGATCAAAGGCTTACAAGTTAAAATGCATGGAAAGTTAGCAAAAATAAGTGATCATAGCTAATGAAGCATGTTGCA CTTAGAAATATGCAATATATACTATATATTATTCATGCACTTAATAGAGAGAAGGTTCATTCTCTCAAATTTTGATTCTCATTATTTGTTCATAAGATGA AGAGCCTTGGTTTTGGCATAGCTAGATAGTGTAAGTGAGAGTTAAGATCAAACTGAAAAATGCATTTAATATCACAATTGGGTTTTCATGTAAGCAAATT CTTTATCATATAAAGTTTATTTATAAGTATTCTGTAATAAATTATTATTAGATTTTATGATTGAGAATAATATGGTAGATCTTGTAGAATTTCCTGTCAC AAATTGAAATAGTTCAGCTATCATAAGTTAATATAAACTGTTTGGTAAGGAATTGATAAGGGAATTTTGGGAAAGGTGTTATTTTCTATCCCCTCCAAGA TAGAGAGAATCAAATGCAAGACACATGTGGATATTTCCGGCTCGGACATGATTGCCTCCAGTGCGATGATACCTGTGGGAAAAAAAAGTACAAGACCCAT AAT
• Tissue: pods
• Gene name: LI_gene_193602;
• Additional information: details;

Expression of Ll_transcript_505856

FPKM

• PAB: 0.3
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.1
• PS3: 0.2
• PW1: 0.8
• PW2: 0.1
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_505856

• Blastp: AMP deaminase from Arabidopsis with 77.57% of identity
• Blastx: AMP deaminase from Arabidopsis with 78.27% of identity
• Eggnog: adenosine deaminase(COG1816)
• Kegg: Link to kegg annotations (AT2G38280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413657.1)
• Pfam: Adenosine/AMP deaminase (PF00962.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;