Ll_transcript_505835

• Id Trinity: TRINITY_DN52545_c0_g1_i2
• Name Transcript: Ll_transcript_505835
• Sequence: CACTTTTTCTCTTTCCACACTGAAACTTACGCCACGCGCTTATGGATGCTTACACTTTACACCTTGCCATGGCGGCACTCATCGGAGCTTCCACCGTCGC TATCTCCGCTTACTTCCTCCACCGTAAGACCCTTTCCCACCTTCTCGAGTTCGCACGCGCCGTCGAACGCGACGTTGATGGCGAGAATCACCTTGCCGGA GTTGTCGCCGGAGATGATTCTTCATCTTCGCCGAAGAGGCATTTGAGGAAGGAACGAAGCGCGTATGATAGGAGGATAGAGAATGGATATTACCGGCGAA GCTCGGCGTCGTTGCCGGATGTCACGGTGGTGGATTCCGTCGAAGAGATTCCGGCGGGGTTGCCGCGGCTGCACACGCGCCGTGAAGCAAAATCTGGACA TCCTGGTACTCCGAAGATAAATATTTTACGAGCAATTTCTCCGAAGTCTCCTGTTGCAAGTGCTAGTGCCTTTGAAAGTGTAGAAGAATCAGATGATGAT ATTGCTGACAATGCTGAATTGGATACTACATATCTGCACACAAATGGAGATGTTGGGCCAGAAAGTAAGAACATATATGAGACTTTACCTGATCACGTTA ATGCTAATGAAGACAAGATACAGCTTACTGCTTCAACAAGTATGATCCGGTCTCATAGTATTTCTGGTGATTTGCATGGCGTGCAGCCTGATCCAATTGC AGCTGACATTCTTAGGAAGGTGCCAGAGCATGAAACTTTTGTTCGGCTTGAAGTTACACCTCTTGAGGGCCCGTCACCTGATGAAGTGGAAGCCTATGTT GTTCTTCAAGAATGCCTTGAAATGAGAAAGAGATACTTGTTTAGAGAAGCAGTTGCTCCATGGGAGAAAGAAGTTATATCTGACCCCTGCACACCAAAGC CTAACCCAGATCCATTCTTTTTTGCTCCTGAAGGGAAGTCTGATCACTACTTTGAAATGCAAGATGGGGTGATTCATGTATATCCAAATAAAGACTCAAA TGAGGAGCTTTTCCCTGTAGCAGATGCAACTACCTTTTTCACTGACCTCCATCACATACTCCGAGTCATAGCGGCAGGGAATATAAGAACTTTATGCCAC TATCGGCTTAATCTTCTAGAACAAAAATTCAACCTTCATTTGATGCTAAATGCGGATAGGGAATTTCTCGCCCAGAAAAGTGCTCCACATCGAGACTTCT ACAATGTCAGGAAAGTTGATACACACGTCCACCACTCAGCATGCATGAATCAGAAACATCTTTTAAGGTTTATAAAGTCAAAGCTAAGGAAAGAGCCTGA TGAGGTTGTAATATTTCGAGACGGGACATATCTGACTTTGAAGGAAGTTTTTGAGAGTCTGGATTTGACTGGATATGACCTCAACGTTGACCTTTTGGAC GTTCATGCAGACAAGAGTACATTTCATCGCTTTGACAAATTCAATCTGAAGTACAATCCTTGTGGTCAGAGTAGGCTCAGGGAGATATTCCTAAAGCAGG ATAATCTTATTCAAGGTCGTTTCCTGGGTGAACTGACAAAGCAAGTGTTTTCTGATCTTGAAGCCAGTAAATATCAGATGGCTGAGTATAGAATATCAAT ATATGGTAGAAAGCAAAGTGAGTGGGACCAGCTAGCTAGTTGGATAGTGAATAATGAATTGTACAGTGAGAATGTTGTTTGGTTGATTCAGCTTCCAAGG TTATACAATGTGTACAAAGAAATGGGTATTGTGACCTCATTCCAGAACATCCTTGATAACATCTTCATTCCACTTTTTGAGGTTACTGTGGACCCCAATT CACATCCTCAGCTCCATGTTTTCCTGAAACTGGTTTGTTACTATTTCAAATACTATATTGTAGAAGGCTAGGAGTTTCTGGTTACTTGTATTGACTGTGC TGATGGTAGGATTGCATTCTTTGACCTGTACATTTATTAAACTTGTAAAGGCGTGTGATTGACTACTAATATGCATTGCACCAACATCCCCACAAAAAAT GGTTTAACTGCAGTGTAAACATGTTTGATCAACCATGTTTAAATTTTTATTTTTTATTTTTAGGTTGTTGGGTTGGATTTGGTGGATGATGAAAGCAAAC CTGAAAGAAGGCCAACAAAACACATGCCTACACCGGCTCAATGGACTAATGTATTCAATCCGGCATTTTCGTATTATGTCTATTACTGCTATGCAAACCT TTACACCTTAAACAAGCTTCGTGAATCCAAGGGAATGACAACAATCAAATTCCGTCCTCACTCTGGAGAGGCTGGTGACATTGACCACCTTGCTGCCACC TTTCTTACGACTCATAACATTGCACACGGAATCAATTTGAGGAAGTCTCCTGTGCTTCAATATTTGTATTATCTTGCTCAGATTGGGCTTGCAATGTCTC CTCTTAGCAATAACTCTCTATTCTTAGACTACCATCGGAATCCTTTACCAGTGTTCTTCTCACGGGGTTTGAATGTTTCACTCTCTACTGATGATCCACT CCAAATTCACTTAACAAAGGAACCACTGGTCGAGGAATATAGCATAGCTGCTTCTGTATGGAAGTTGAGCGCATGTGATTTATGTGAGATTGCCCGTAAC TCAGTTTATCAGTCAGGTTTCTCACATGCCTTAAAGTCACATTGGATTGGCAAGGAGTATTACAAGAGAGGGCCAAATGGAAATGACATTCACAGAACAA ATGTCCCTCACATCCGGTTGGAATTCCGAGACATGATTTGGAGAGAGGAGATGCAACAGGTTTATTTGGGCAAAGCCATCATTCCTGAAGATATAGACAA ATAATATGCCTGAGGCATTTACTTCATCCATACTTGAAATATCAGACTTGTAAACAGCTTGACAATGAATTTCACATACCGACTCAGCATCAGGGATGGC ATCTGAGAACCCTATTTAATGGCGAGCCTCGCAATAACTAGGCTGATTACATCACAAGATTTGTTTGAGAATATGGACCTGATACAATAGTATATCCCAC GCGACATGACCACGTAGCTGGAGCATAGATCAAGGCGCCGGGTTAGCAAAAATAATTTTGATCATAGCAAATGAAGCATGTTGCATTTAGATATATAATT ATATTATCCATACCCTTAAAAGAGAGAAGAAATTAGTTCTCTCAAATTTTGATTCCTATTGTTTGTCAATATGGCATTGAATGATGAAGAATAGCCCTCA GTCTTGGCATGCATGCTTCAGGATGAAATGGGCATTAGATAGTGAGTTAAGTTGATACTGAATGATCCATTTTATGTAACAATTGGCTTTCATGTACACA AATTCTTTATCATATACAATTTATTTATAAGTATTCTGTAACAAGCATTGCTAAATTGCAATAAATATTGTTTGTGATAGTAGAACTAGCACTGTGATAT CCTAAGCTATTTATATACTGTGTAACCTATACATCTTGCAAAAAAG
• Tissue: pods
• Gene name: LI_gene_193602;
• Additional information: details;

Expression of Ll_transcript_505835

FPKM

• PAB: 0
• PNAB: 2.1
• PS1: 0.9
• PS2: 0.9
• PS3: 0.7
• PW1: 1.6
• PW2: 1.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_505835

• Blastp: AMP deaminase from Arabidopsis with 70.99% of identity
• Blastx: AMP deaminase from Arabidopsis with 70.83% of identity
• Eggnog: adenosine deaminase(COG1816)
• Kegg: Link to kegg annotations (AT2G38280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413657.1)
• Pfam: Adenosine/AMP deaminase (PF00962.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;