| Id Trinity | TRINITY_DN52545_c0_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_505860 |
| Sequence | CACTTTTTCTCTTTCCACACTGAAACTTACGCCACGCGCTTATGGATGCTTACACTTTACACCTTGCCATGGCGGCACTCATCGGAGCTTCCACCGTCGC TATCTCCGCTTACTTCCTCCACCGTAAGACCCTTTCCCACCTTCTCGAGTTCGCACGCGCCGTCGAACGCGACGTTGATGGCGAGAATCACCTTGCCGGA GTTGTCGCCGGAGATGATTCTTCATCTTCGCCGAAGAGGCATTTGAGGAAGGAACGAAGCGCGTATGATAGGAGGATAGAGAATGGATATTACCGGCGAA GCTCGGCGTCGTTGCCGGATGTCACGGTGGTGGATTCCGTCGAAGAGATTCCGGCGGGGTTGCCGCGGCTGCACACGCGCCGTGAAGCAAAATCTGGACA TCCTGGTACTCCGAAGATAAATATTTTACGAGCAATTTCTCCGAAGTCTCCTGTTGCAAGTGCTAGTGCCTTTGAAAGTGTAGAAGAATCGGATGATGAT ATGGTTGACAATGCGAAACTGGATACTACACATCTGCACACGAATGGAGATGTTGGACTGGACGATAAAAACAGATACGAGACTTTACCTGATCACGTTA ATGCTAATGGAGAGAAAATACAACTTACTGCTTCAAAAAGTGTGATCCATTCTCATAGTATTTCCGGTGACTTGCATGGCGTACAGCCTGATCCGATTGC AGCTGATATTCTTAGGAAGGTGCCCGAGCATGAAACTTTTGCCCGGCTTAAAGTTACACCTCTTGAGGGTCCGTCACCCGATGAAGTGGAAGCATATGTG ATTCTTCAAGAATGCCTTGAAATGAGAAAAAGATACTTATTTAGAGAAGCAATTGCTCCATGGGAGAAAGAAATTATATCTGATCCCTGCACACCAAAGC CCAACACAGACCCATTCTTTTTTGCTCCTGAAGGGAAGTCTGATCATTACTTTGAAATGCAAGATGGGGTTATTCATGTATATCCAAATAAAGACTCAAA AGAGGAGATTTTCCCTGTTGCAGATGCAACAACCTTTTTCACTGACCTCCATCACATACTCCGAGTCATAGCGGCAGGGAATATAAGAACATTATGCCAC TATCGGCTTAATCTTCTAGAGCAAAAATTCAATCTTCATTTGATGTTAAACGCGGATAGGGAATTTCTCGCCCAGAAAAGTGCTCCACATCGAGACTTCT ACAATGTCAGGAAAGTCGATACACATGTCCACCACTCAGCATGCATGAATCAGAAACATCTTTTAAGGTTTATAAAGTCAAAGCTAAGGAAAGAGCCTGA TGAGGTTGTAATATTTCGAGACGGGACATATCTGACTTTGAAGGAAGTTTTTGAGAGTCTGGATTTGACTGGGTAATGAACTTCTTCGTAATTTTTACTA TAGTTAATAATTTTTATTGGGTTTGGCTGGCAATAAACTGAAATAATAATTATTTTAATTATCTTTGAGACAGATATGACCTCAACGTTGACCTTTTGGA CGTTCATGCAGACAAGAGTACATTTCATCGCTTTGACAAATTCAATCTGAAGTACAATCCTTGTGGTCAGAGTAGGCTCAGGGAGATATTCCTAAAGCAG GATAATCTTATTCAAGGTCGTTTCCTGGGTGAACTGACAAAGCAAGTGTTTTCTGATCTTGAAGCCAGTAAATATCAGATGGCTGAGTATAGAATATCAA TATATGGTAGAAAGCAAAGTGAGTGGGACCAGCTAGCTAGTTGGATAGTGAATAATGAATTGTACAGTGAGAATGTTGTTTGGTTGATTCAGCTTCCAAG GTTATACAATGTGTACAAAGAAATGGGTATTGTGACCTCATTCCAGAACATCCTTGATAACATCTTCATTCCACTTTTTGAGGTTACTGTGGACCCCGAT TCACATCCCCAGCTTCATGTTTTCCTGAAACAGGTTGTTGGGTTGGATTTGGTGGATGACGAAAGCAAACCTGAAAGAAGGCCAACAAAACACATGCCTA CACCGGCTCAATGGACTAACGTATTCAATCCTGCATTTTCGTACTACGTCTATTACTGCTATGCAAACCTTTACACCTTAAACAAGCTTCGTGAAATGAA GGGAATGACAACAATCAAATTCCGCCCTCACTCTGGAGAGGCTGGTGATATTGACCACCTTGCTGCAACCTTTCTTACGGCTCATAACATTGCACATGGA ATCAATTTGAGAAAGTCTCCCGTGCTGCAATATCTGTATTATCTTGCTCAGATTGGGCTTGCAATGTCTCCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_193602; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_505860
| Blastp | AMP deaminase from Arabidopsis with 62.53% of identity |
|---|---|
| Blastx | AMP deaminase from Arabidopsis with 94.66% of identity |
| Eggnog | adenosine deaminase(COG1816) |
| Kegg | Link to kegg annotations (AT2G38280) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413657.1) |
| Pfam | Adenosine/AMP deaminase (PF00962.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |