Ll_transcript_505864

• Id Trinity: TRINITY_DN52545_c0_g1_i24
• Name Transcript: Ll_transcript_505864
• Sequence: AGGCAATGTCACGAGAGAGAGAAAGAAAGAAAGAAAAGAAAGGGTACTGAGTCGAAAGCTAAACTCAGTGTTTCTTCATTCTCCAACTCGTCACTCACTC ACTCGCTCACTCGCTCGCTCACTCGCTCACTCACTACTCAGTAGGGTTTATCTCTCTCTCTCTCTCTTTATCTTTTTAACTTCAATCTCTAGAGAGAGAA AGTCATGGATGCTTATGCTTTGCACCTTGCCATGGCGGCACTCGTTGGAGCTTCCGCCGTCGCAATTTCCGCTTACTTCCTCCACCGCAAGACGCTATCG CAGATACTCGAGTTCGCACGCGCCGTCGAAGGCGATGAAACCAAACATGACGTCGACGTTGTTGATTCTTCGCCGAAGAGGCATTTCAGGAAGCACCTTA TCGCTAGGAAGAAGGGGAATGGTTATTACCGGAGATTCTCGACGTCGTTGCCGGATGTTACGGTGATTTCCGGTGGCGGCGAGGTGGATTCCGTTGAAGG GATTCCGGCTGGGTTGCCGAGGTTGCATATGCTCCGTGAAGCAAAGTCTGCACATCCTGGTACTCCGAAAAGAAATATATTGAGAGCAATTTCTCCCAAG TCTCCTGCTGTGAATGCTAGTGCCTTTGACAGTGTAGAAGAATCAGATGATGATATTGCTGACAATGCTGAATTGGATACTACATATCTGCACACAAATG GAGATGTTGGGCCAGAAAGTAAGAACATATATGAGACTTTACCTGATCACGTTAATGCTAATGAAGACAAGATACAGCTTACTGCTTCAACAAGTATGAT CCGGTCTCATAGTATTTCTGGTGATTTGCATGGCGTGCAGCCTGATCCAATTGCAGCTGACATTCTTAGGAAGGTGCCAGAGCATGAAACTTTTGTTCGG CTTGAAGTTACACCTCTTGAGGGCCCGTCACCTGATGAAGTGGAAGCCTATGTTGTTCTTCAAGAATGCCTTGAAATGAGAAAGAGATACTTGTTTAGAG AAGCAGTTGCTCCATGGGAGAAAGAAGTTATATCTGACCCCTGCACACCAAAGCCTAACCCAGATCCATTCTTTTTTGCTCCTGAAGGGAAGTCTGATCA CTACTTTGAAATGCAAGATGGGGTGATTCATGTATATCCAAATAAAGACTCAAATGAGGAGCTTTTCCCTGTAGCAGATGCAACTACCTTTTTCACTGAC CTCCATCACATACTCCGAGTCATAGCGGCAGGGAATATAAGAACTTTATGCCACTATCGGCTTAATCTTCTAGAACAAAAATTCAACCTTCATTTGATGC TAAATGCGGATAGGGAATTTCTCGCCCAGAAAAGTGCTCCACATCGAGACTTCTACAATGTCAGGAAAGTTGATACACACGTCCACCACTCAGCATGCAT GAATCAGAAACATCTTTTAAGGTTTATAAAGTCAAAGCTAAGGAAAGAGCCTGATGAGGTTGTAATATTTCGAGACGGGACATATCTGACTTTGAAGGAA GTTTTTGAGAGTCTGGATTTGACTGGATATGACCTCAACGTTGACCTTTTGGACGTTCATGCAGACAAGAGTACATTTCATCGCTTTGACAAATTCAATC TGAAGTACAATCCTTGTGGTCAGAGTAGGCTCAGGGAGATATTCCTAAAGCAGGATAATCTTATTCAAGGTCGTTTCCTGGGTGAACTGACAAAGCAAGT GTTTTCTGATCTTGAAGCCAGTAAATATCAGATGGCTGAGTATAGAATATCAATATATGGTAGAAAGCAAAGTGAGTGGGACCAGCTAGCTAGTTGGATA GTGAATAATGAATTGTACAGTGAGAATGTTGTTTGGTTGATTCAGCTTCCAAGGTTATACAATGTGTACAAAGAAATGGGTATTGTGACCTCATTCCAGA ACATCCTTGATAACATCTTCATTCCACTTTTTGAGGTTACTGTGGACCCCGATTCACATCCCCAGCTTCATGTTTTCCTGAAACAGGTTGTTGGGTTGGA TTTGGTGGATGACGAAAGCAAACCTGAAAGAAGGCCAACAAAACACATGCCTACACCGGCTCAATGGACTAACGTATTCAATCCTGCATTTTCGTACTAC GTCTATTACTGCTATGCAAACCTTTACACCTTAAACAAGCTTCGTGAAATGAAGGGAATGACAACAATCAAATTCCGCCCTCACTCTGGAGAGGCTGGTG ATATTGACCACCTTGCTGCAACCTTTCTTACGGCTCATAACATTGCACATGGAATCAATTTGAGAAAGTCTCCCGTGCTGCAATATCTGTATTATCTTGC TCAGATTGGGCTTGCAATGTCTCCTCTTAGCAATAACTCTCTATTCTTAGACTACCATCGGAATCCTTTACCAGTGTTCTTCTCACGGGGTTTGAATGTT TCACTCTCTACTGATGATCCACTCCAAATTCACTTAACAAAGGAACCACTGGTCGAGGAATATAGCATAGCTGCTTCTGTATGGAAGTTGAGCGCATGTG ATTTATGTGAGATTGCCCGTAACTCAGTTTATCAGTCAGGTTTCTCACATGCCTTAAAGTCACATTGGATTGGAAAGGAGTATTACAAGAGAGGGCCAAA TGGAAATGACATTCATAGAACAAATGTTCCCCACATCCGGTTGGAATTCCGAGACACGATTTGGAGAGAGGAGATGCAACAGGTTTATTTGGGCAAAGCC ATCATTCCCGAAGAAGTAGACAAATAATATACCCCAGACTTTTCCTTTTGCAAACAGGATGAAAGTGAATTTCACATACCCACCCATCGTCATGGAGGGT TTCTAAGACCCCTATTTAATAGAGAGACTTGTAATAATTATGGCTCAACACTTAACAAAATTGGTTTAAGGATATGGAGCTGATAAATACTATATATCTC ACATGACCATTTAGCTGGAGCATGGATCAAAGGCTTACAAGTTAAAATGCATGGAAAGTTAGCAAAAATAAGTGATCATAGCTAATGAAGCATGTTGCAC TTAGAAATATGCAATATATACTATATATTATTCATGCACTTAATAGAGAGAAGGTTCATTCTCTCAAATTTTGATTCTCATTATTTGTTCATAAGATGAA GAGCCTTGGTTTTGGCATAGCTAGATAGTGTAAGTGAGAGTTAAGATCAAACTGAAAAATGCATTTAATATCACAATTGGGTTTTCATGTAAGCAAATTC TTTATCATATAAAGTTTATTTATAAGTATTCTGTAATAAATTATTATTAGATTTTATGATTGAGAATAATATGGTAGATCTTGTAGAATTTCCTGTCACA AATTGAAATAGTTCAGCTATCATAAGTTAATATAAACTGTTTGGTAAGGAATTGATAAGGGAATTTTGGGAAAGGTGTTATTTTCTATCCCCTCCAAGAT AGAGAGAATCAAATGCAAGACACATGTGGATATTTCCGGCTCGGACATGATTGCCTCCAGTGCGATGATACCTGTGGGAAAAAAAAGTACAAGACCCATA AT
• Tissue: pods
• Gene name: LI_gene_193602;
• Additional information: details;

Expression of Ll_transcript_505864

FPKM

• PAB: 0.5
• PNAB: 7.7
• PS1: 8.6
• PS2: 2.9
• PS3: 4.9
• PW1: 7.9
• PW2: 6.3
• PW3: 9.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_505864

• Blastp: AMP deaminase from Arabidopsis with 77.57% of identity
• Blastx: AMP deaminase from Arabidopsis with 78.27% of identity
• Eggnog: adenosine deaminase(COG1816)
• Kegg: Link to kegg annotations (AT2G38280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413657.1)
• Pfam: Adenosine/AMP deaminase (PF00962.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;