Ll_transcript_505839

• Id Trinity: TRINITY_DN52545_c0_g1_i5
• Name Transcript: Ll_transcript_505839
• Sequence: AGGCAATGTCACGAGAGAGAGAAAGAAAGAAAGAAAAGAAAGGGTACTGAGTCGAAAGCTAAACTCAGTGTTTCTTCATTCTCCAACTCGTCACTCACTC ACTCGCTCACTCGCTCGCTCACTCGCTCACTCACTACTCAGTAGGGTTTATCTCTCTCTCTCTCTCTTTATCTTTTTAACTTCAATCTCTAGAGAGAGAA AGTCATGGATGCTTATGCTTTGCACCTTGCCATGGCGGCACTCGTTGGAGCTTCCGCCGTCGCAATTTCCGCTTACTTCCTCCACCGCAAGACGCTATCG CAGATACTCGAGTTCGCACGCGCCGTCGAAGGCGATGAAACCAAACATGACGTCGACGTTGTTGATTCTTCGCCGAAGAGGCATTTCAGGAAGCACCTTA TCGCTAGGAAGAAGGGGAATGGTTATTACCGGAGATTCTCGACGTCGTTGCCGGATGTTACGGTGATTTCCGGTGGCGGCGAGGTGGATTCCGTTGAAGG GATTCCGGCTGGGTTGCCGAGGTTGCATATGCTCCGTGAAGCAAAGTCTGCACATCCTGGTACTCCGAAAAGAAATATATTGAGAGCAATTTCTCCCAAG TCTCCTGCTGTGAATGCTAGTGCCTTTGACAGTGTAGAAGAATCAGATGATGATATTGCTGACAATGCTGAATTGGATACTACATATCTGCACACAAATG GAGATGTTGGGCCAGAAAGTAAGAACATATATGAGACTTTACCTGATCACGTTAATGCTAATGAAGACAAGATACAGCTTACTGCTTCAACAAGTATGAT CCGGTCTCATAGTATTTCTGGTGATTTGCATGGCGTGCAGCCTGATCCAATTGCAGCTGACATTCTTAGGAAGGTGCCAGAGCATGAAACTTTTGTTCGG CTTGAAGTTACACCTCTTGAGGGCCCGTCACCTGATGAAGTGGAAGCCTATGTTGTTCTTCAAGAATGCCTTGAAATGAGAAAGAGATACTTGTTTAGAG AAGCAGTTGCTCCATGGGAGAAAGAAGTTATATCTGACCCCTGCACACCAAAGCCTAACCCAGATCCATTCTTTTTTGCTCCTGAAGGGAAGTCTGATCA CTACTTTGAAATGCAAGATGGGGTGATTCATGTATATCCAAATAAAGACTCAAATGAGGAGCTTTTCCCTGTAGCAGATGCAACTACCTTTTTCACTGAC CTCCATCACATACTCCGAGTCATAGCGGCAGGGAATATAAGAACTTTATGCCACTATCGGCTTAATCTTCTAGAACAAAAATTCAACCTTCATTTGATGC TAAATGCGGATAGGGAATTTCTCGCCCAGAAAAGTGCTCCACATCGAGACTTCTACAATGTCAGGAAAGTTGATACACACGTCCACCACTCAGCATGCAT GAATCAGAAACATCTTTTAAGGTTTATAAAGTCAAAGCTAAGGAAAGAGCCTGATGAGGTTGTAATATTTCGAGACGGGACATATCTGACTTTGAAGGAA GTTTTTGAGAGTCTGGATTTGACTGGATATGACCTCAACGTTGACCTTTTGGACGTTCATGCAGACAAGAGTACATTTCATCGCTTTGACAAATTCAATC TGAAGTACAATCCTTGTGGTCAGAGTAGGCTCAGGGAGATATTCCTAAAGCAGGATAATCTTATTCAAGGTCGTTTCCTGGGTGAACTGACAAAGCAAGT GTTTTCTGATCTTGAAGCCAGTAAATATCAGATGGCTGAGTATAGAATATCAATATATGGTAGAAAGCAAAGTGAGTGGGACCAGCTAGCTAGTTGGATA GTGAATAATGAATTGTACAGTGAGAATGTTGTTTGGTTGATTCAGCTTCCAAGGTTATACAATGTGTACAAAGAAATGGGTATTGTGACCTCATTCCAGA ACATCCTTGATAACATCTTCATTCCACTTTTTGAGGTTACTGTGGACCCCGATTCACATCCCCAGCTTCATGTTTTCCTGAAACAGGTTGTTGGGTTGGA TTTGGTGGATGACGAAAGCAAACCTGAAAGAAGGCCAACAAAACACATGCCTACACCGGCTCAATGGACTAACGTATTCAATCCTGCATTTTCGTACTAC GTCTATTACTGCTATGCAAACCTTTACACCTTAAACAAGCTTCGTGAATCCAAGGGAATGACAACAATCAAATTCCGTCCTCACTCTGGAGAGGCTGGTG ACATTGACCACCTTGCTGCCACCTTTCTTACGACTCATAACATTGCACACGGAATCAATTTGAGGAAGTCTCCTGTGCTTCAATATTTGTATTATCTTGC TCAGATTGGGCTTGCAATGTCTCCTCTTAGCAATAACTCTCTATTCTTAGACTACCATCGGAATCCTTTACCAGTGTTCTTCTCACGGGGTTTGAATGTT TCACTCTCTACTGATGATCCACTCCAAATTCACTTAACAAAGGAACCACTGGTCGAGGAATATAGCATAGCTGCTTCTGTATGGAAGTTGAGCGCATGTG ATTTATGTGAGATTGCCCGTAACTCAGTTTATCAGTCAGGTTTCTCACATGCCTTAAAGTCACATTGGATTGGCAAGGAGTATTACAAGAGAGGGCCAAA TGGAAATGACATTCACAGAACAAATGTCCCTCACATCCGGTTGGAATTCCGAGACATGATTTGGAGAGAGGAGATGCAACAGGTTTATTTGGGCAAAGCC ATCATTCCTGAAGATATAGACAAATAATATGCCTGAGGCATTTACTTCATCCATACTTGAAATATCAGACTTGTAAACAGCTTGACAATGAATTTCACAT ACCGACTCAGCATCAGGGATGGCATCTGAGAACCCTATTTAATGGCGAGCCTCGCAATAACTAGGCTGATTACATCACAAGATTTGTTTGAGAATATGGA CCTGATACAATAGTATATCCCACGCGACATGACCACGTAGCTGGAGCATAGATCAAGGCGCCGGGTTAGCAAAAATAATTTTGATCATAGCAAATGAAGC ATGTTGCATTTAGATATATAATTATATTATCCATACCCTTAAAAGAGAGAAGAAATTAGTTCTCTCAAATTTTGATTCCTATTGTTTGTCAATATGGCAT TGAATGATGAAGAATAGCCCTCAGTCTTGGCATGCATGCTTCAGGATGAAATGGGCATTAGATAGTGAGTTAAGTTGATACTGAATGATCCATTTTATGT AACAATTGGCTTTCATGTACACAAATTCTTTATCATATACAATTTATTTATAAGTATTCTGTAACAAGCATTGCTAAATTGCAATAAATATTGTTTGTGA TAGTAGAACTAGCACTGTGATATCCTAAGCTATTTATATACTGTGTAACCTATACATCTTGCAAAAAAG
• Tissue: pods
• Gene name: LI_gene_193602;
• Additional information: details;

Expression of Ll_transcript_505839

FPKM

• PAB: 0.5
• PNAB: 4.1
• PS1: 4.2
• PS2: 1.7
• PS3: 3.5
• PW1: 3.2
• PW2: 3.9
• PW3: 4.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_505839

• Blastp: AMP deaminase from Arabidopsis with 77.34% of identity
• Blastx: AMP deaminase from Arabidopsis with 78.03% of identity
• Eggnog: adenosine deaminase(COG1816)
• Kegg: Link to kegg annotations (AT2G38280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413657.1)
• Pfam: Adenosine/AMP deaminase (PF00962.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;