| Id Trinity | TRINITY_DN52549_c2_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_504723 |
| Sequence | TTTGTGTTCAAAAAAAATAATGATAAAAGTTCTCATGATTTTAGTATGAGATAATATATGTTGATTTTAGTAGTGAGATAATAACTATTTTAGTGGCAGA AGTTCTCATCTTGTCGTCTTTCTCACTCTGAATATAATAACGACGATCACCACCGCACTGTTGCCGCAGCACGCCACAAAACGTTGTCGTTTTACAGAAG CTAAGAAGATCAATTACCAATTTCGATTCAATTTCACGCTCATGCACAAATAGAAGAATCAGATTCACACTCTCAATGCTCACGCACTATTCTGGTACAT TGTTTTACTCCAATTCAAAGTTGCGTTTCAATTTTTTACGCGAATTTCCCTACTGTACCCTTTTCTAGCTTCATTTTCCGATGCCCTAGCTTCCTTAGAA TTACTGTGAACTATTGCTCAGTTGTTCGCATAATTTGTACAAGGGTTTCTGCTCTGAGCTTCTGAATCAGTCAATTGGCGAGAGCGGTAATAACGACTTG CGGTGTGATTAGGGTTTTTGGCGAAGGTTTTAGGGAATTATAGGGTTTATATGGAAGTTACAGCATGCTATAGCTGTTTTAATCAAAGTGAAATTAGGAT GATCCTTTGATGACTGTTGGTTGAAGATGGTTAGGCTTTTAGGGCTTACTATCGGGCATGCAGAAGAACCCCGAGAAATCACTTCGAGGTCAAACCTCAC CAGCGAGACAAGCGAGAATGGCTGGCTCATCAGGTTCTTTGACTCGTCGTTTTTCTGCGAGTGGATTGCTGTTAGCTACTTATACAAGCATGATCATGCT GGGGTGCGTGATTATCTGTGTAATAGGATGTATACTCTTCCTTTGCATGGAATTGAGAGTTATTTGTTCCAAATATGTTACATGATGATACACAAGCCGA GCCCGTCTTTGGACAAATTTGTCATAGACGTGTGCTCCAAGTCACTTAAGATTGCTTTGAAGGTGGAATGGTTCTTGATGGCAGAGCTTGAGGACTCTGA TGATAATGAAGGGATTAGTAGACTTCAGGAGAAGTGTCAGATTTCTGCAACCTTGTTGGGGGAGTGGCCACCTTTGATACAGCCTCATAGGGAACTTCCG AGTCCTGGAGGCAAGAACCAAGTTTTGAATAGGTTGTTGTCGTCAAAAAATCGATTCTTGTCACTAACAACTTCTCCGCCTACTCAGAAATCTTTATCAT TCTCACCATCTTCATCAGGAAACAATTTCCAAGAGGATGGTAATCCACAATCTCCTGATGAGAACAAAATATTTAAGAAGTTTATGCCGAGTACAAAGGT GAGAGATGCTTTACTGTTTCGAAAGTCAGTAGACAAAGACAATGATACTTCTGAGAAAGATGGGTTTTTCAAGAGACTTCTAAGAGATAGCAAAGGTGAT GATGAGCCAGGCCTGAAGATTCGAGATGCATTTTCCTTTAGGAAGTCCACTGAGAAAGATGATGAAGACTCGGAAAAGGATAATTTCTTTAAAAGGTTCT TGAGGGATAGTTGGGACAGTAGAGGTGACAATGAAGACTTGGAAAAGGATGGTTTCTTTAGAAGGTTCTTAAGAGACAGTAAAGGTGAGGACGAGGATCC AGCCTCAAGTACAGAGGGATTTTTTAAAAAACTGTTTCGTGATAGCAAGAATGATTCTGAGGACATAGCACACAGTAAAACAATGGAAGATGAAGATAAA GATGGATTTTTACTAAAGTTTTTCCGTGAGAAATTTGAAGATAGGAATGATGACAGAAATGTTGCTAATTCTGAAGAAAAATGTCCAAAATCTGCTGAAG AGTATGAAAAAGAAGGGTTCCTCGGGAAATTCTTCAAGGATAAATCTGAGGACAAGAAAGACACAAATGACAAATTTGAAGAGGGTACTGCCAATGGTGA GGAAGAAGAGCCTTTTGAGTTTTCCCTGTTCAAAAGACTATTTCGTGTGCACCCTGAAGATGCTAAAAGTAGTCCAACTAGTGAAATCAACAATAACGGT GGCTTATTGGAAAGTAGTCCAGGGACAGAGAGTTTTTTCCGCAAATTATTCAAAGACCGTGACCGTTCAATCAAAGATTCAGAGCTATTGGGGTCAAAGC GACAGAAAGAGATGCATCTTGGATCGCCAAAGCAGCAAAGTGAAAAATCAAGTACAAAGCCCCCACTTCCAACTAGTACATCTCAGTTCCGGAAAGGTGC TTACCATGACTCATTGGAGTTTGTGCGGTCATTATGTGAAACATCATTTGGGTTAGTGGATGTATTTCCAATTGAAGATCGAAAAAGTGCTCTGTGTGAG GTTATTTCTGTACATTTTTCTTTAATGATTTCTTCATCTAGTTTACACAATGAGAGTTGGGCCTGTGCTTGTGTTCTATAACATGTTTGGACCTTTTCCA TTTTAATGTTTGTGACTCATTCTTTATTATATCCCTGTTTCTAGTCACTTGCGGAGATCAATTTACATGTAACAGAGGCTCAAAATACTGGAGGTACTTC TGAACTATTATTCATATTCTTCGTGTGATGTTCATTTAGGACAATGTATTTCTCTATTTATCATGTTTCAAGTGAGCAGGTTAAATTTTATGTATTTCTG AAGAGTATTCTAAAATTTGCCCCGGCAATGTGCTTACTGGTTTCGAGTCAGACTTTACATGTCTTATTTTCTCCCTTTTGGATATATATAATAAAATAAA TGGGTTGGTTGTCTAGAAATAGATCTTTTTGTGTAGAAAATATGGTCAAATTTCCCATTTATCCTCAATTGACTTATTTTTTTAATTCACTATGACTGAA TATATACAAAATACCTATTTTGTGTTTGCCGAGGGCCCTATATGATTAGATTATTAGAATTGATGGTTGTTGCCAGTTCTTTACTGTAAAGATATGCCAT TTTATGGTGTGCTATTTAGGATTTAAGTTACAACATCTCCTATTGCTCTTATGATAAGTAGATTTCATTTATCCTTTTGCTTCTACACGAAACTTGCTTA TGATATATTTCTAGGAATTTGTTTTCCAATGGGAAAGGGCATGTATCGTGTGCTTCATATACCTGAAGATGAAGCTGTTCTCTTGAATTCTAGGGAGAAG GCACCTTACCTGATCTGTGTTGAAGTTTTGAGATGTGAAATGCCAAGCAATACCAAGGAGACATCTAGCTCTCAGAAACTTTCTCGAGGCGGAATTCCTT TGGCAAATGGAGATGCTTTCTTGCAAAAACCACCCCTCTGGGCTTATCCATTACGGACAGCACAAGAGGTGTATCGTAATAGCAATGATAGGCTGTCCAA TTCGACTGCTCAGGCAATTGATCAGGCAATGACCCATGTATCTGGGACAAAAACCAAATTTGTTAGTGTGAACCTCTCAGTGGAAACACAGTTACATGGT CAGCCAGGGAAAGCTGAATTGGCTGATCCACGCGGCGGTAGGCAGCGTCCTGGTTCAATTTATAAAAAGGTTGTACATGAAGTGGTGGATGCCGGACATG ACAAAGATTTGGACTGGGTACGAGTAGTGTTGACAGCTGATCCTGGAGTTAGATTGGAAGAGATCGAGGATCAAGCACCACCCCGGAAGAAGGAACATCG CCGTGTTCCAAGTACAGTGGCAATAGAGGAAGTAAAGGCTGCGGCAGCAAAAGGTGAAGCACCTCCTGGGCTCCCTTTGAAAGGTGCTGGTCAAGATTCA TCAGACGCACAACCAATGGCAAATGGAATCACTCCAAAAGCAAGTGATGCCTTGTCTGGTGAACTTTGGGAGGCAAAGAAAGAAAGGATACGAAAGGCTT CTATATATGGAAAGATACCTGGTTGGGACTTGCGATCTGTTATTGTAAAAAGCGGTGACGATTGCAGGCAGGAGCATCTGGCAGTTCAACTTATTTCTCA CTTCTATGATATTTTCCAAGAAGCTGGTCTACCTCTCTGGCTCCGCCCATATGAAGTATTATGTACTTCTTCTTACACAGCTCTTATTGAAACAATTTCA GATACGGCTTCTCTTCATTCTATCAAAAGTAGATATCCCAACATCTCAAGTCTACGTGAATTCTTCAATGCCAAGTATGAAGAAAATTCTCCAAGTTTTA ATCTTGCCCAGAGGAACTTCGTCGAGAGTATGGCTGGATATTCCCTCGTGTGCTACCTTCTACAGGTGAAGGATAGACATAATGGAAATCTCTTATTGGA TGAAGAAGGTCATATCATACATATTGATTTTGGCTTCATGCTTTCCAATTCGCCTGGTGGTGTTAACTTTGAAAGCGCACCTTTCAAATTAACCCGAGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_193635; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_504723
| Blastp | Phosphatidylinositol 4-kinase beta 1 from Arabidopsis with 62.17% of identity |
|---|---|
| Blastx | Phosphatidylinositol 4-kinase beta 1 from Arabidopsis with 75.96% of identity |
| Eggnog | phosphatidylinositol 4-kinase(ENOG410XPH3) |
| Kegg | Link to kegg annotations (AT5G64070) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458868.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |