Ll_transcript_505787

• Id Trinity: TRINITY_DN52550_c0_g1_i35
• Name Transcript: Ll_transcript_505787
• Sequence: AACAAATTTGAACTACTGAGAAAACACTTTTCTATGTTTTTGCTCTTGCAGTAGTTTTTGAACGCAATTATTACTGATAGGCTTCAGCTGTTACAATTTC CAGGTTGGTGGTAATTTGACAGTGGGAGGGATTGATTATTTTGTAAATGATGCTTTTGGTGAAGGGTTATATGAGTCCTGCAAGGAAGTAAAGTTTGGCA CCATGAACACTCTAGCTCTACAATTTCTTGGTGCAGGTGCTCAAAATTTTAGAGAGTGGTACACTTTTATTGGTAGAAAAGCAGCCCTTAATAGTCCTGG TTCACCATATGCAATTACGTTCCGTCCAAATGCAACCATGTCATCTGGCATGAAACCTATGAATGTTTCAACATATTCATGTGGTGACATTTCTCTTGGA TGCTCTTGCGGTGACTGTCCTTCATCTTCAGTGTGCTCTAGCTCACCTTCAACAACCACCCATAAGAAGGATTCCTGCTCCATTAAAGCTGGGTCTTTAA CGGTGAAGTGTGTTGATTTGATTTTAACAGTCTTATACATCATACTGATTTCTGTGTTCTTGGGTTGGGGATTGTATCATCGGATAAGGGAAAGAAAACC GGAATACAGAACAAGACCAGTGTCTAATATCATTAGTGGTGGGGTGCTTCATTCTCTTGATAGGGAGAAGGATGAGAACCTCCCAATGCAGGTTCATATG ATGCAAGATGTTGCACAAAACCGAAATGAGGTCCAGCTCTCAGTAGTGCAACGATACATGTCAATCTTTTACAGGAAATATGGATCATA
• Tissue: pods
• Gene name: LI_gene_193639;
• Additional information: details;

Expression of Ll_transcript_505787

FPKM

• PAB: 0.5
• PNAB: 2.8
• PS1: 4.3
• PS2: 2.5
• PS3: 4.5
• PW1: 1.8
• PW2: 2.7
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_505787

• Blastp: Niemann-Pick type C-related protein 1 from Saccharomyces with 26.52% of identity
• Blastx: Niemann-Pick type C-related protein 1 from Saccharomyces with 30% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YPL006W)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438099.1)
• Pfam: Niemann-Pick C1 N terminus (PF16414.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;