Id Trinity | TRINITY_DN52552_c0_g1_i11 |
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Name Transcript | Ll_transcript_506875 |
Sequence | CAGCAATAACACTTGAACCAACAACCCCTTCATCTTCATCATCATCATCATCATCATCATGGGATTCAATGCTCCCTGGTCCACCAAACCGCAACAACTT TGGCTCTTCAGATCTCAGTCCTCACGGCCTTCTCGCTTTCCCTTCTGGAAGTTCCTTATCTATCATCGATACTCGTTCCATGCAACTTCTTTCTTCTTTT CCCATTCCTCCACCTTCTTCTGCCACGTCATCACTTTCTCCTTTTGTAACCGCTCTTCGCTGGACCCCACTCCCTCTCAACCGTGATCTCCTTTCTACGG AGCCTTCCTCTTCTCATCTCTTCCTCGCCGCCGGCGACCGCCAAGGCCGTATCGCGCTCCTCGACTTTCGACTCAAATCGGCGGTGCTGTGGTTTGATAC TGACTCTAGGTTAGGTGTTCAAGATCTGTGTTGGCTTCAGGCACGACCTGATTTATATATAATTGCTGCGATTCATGGATCTTCTACGCTTTCTCTTTAT AATGCTTCCACTGGACGGTGTGTTTGGAAATACGATGCCTCGCCGGAATTCTTATCTTGTGTTCGCCGTGATCCATTTGATTCGCGCCGGATATGTGCGA TTGGACTCAAAGGTTTTCTTCTCTCTGTTGTCCTACTCGGTGATAGTGAGGAAAGCATTGTGATCAAGGAGCTTCAGATTCGGACTGATAGCAGCGAATT GATTAAGGTGGAGAGAGATGCTGCTTCTGCTGCTGGTACTGCAGCTGCGTTGCCTGCTTCGGCAGCGTTTCCGCTTTACACAGCTAGGTTCGCGTTTTCG CAGCAGTGGAGGCACATTTTGTTCGTTACATTTCCTAGGGAATTGGTCGTGTTTGATTTGCAGTATGAGACAGTGATCTTTACCAGTGCGTTGCCTCGTG GTTGCGGCAAGTTTCTTGATGTGTTGCCTGATCCAAATAATGACTGGATTTACTGTGCTCATATTGATGGCAAGCTCAGCACCTGGCGGAGGAAGCCTGG GGAACAAGTACATGTTATGTGCTCAATGGAAGAGTTAATGCCTTCAATTGGAACCTCTGTCCCTTCTCCTTCAATACTCTCTGTCCTTTTATGCCAATCA GATTCTACAATTCAGAACATCGGAATCAGTTATTCTGATGTTCCTAGTTCTCCTTACCTTCGTGAGGATTTTGACAATCCTTTTGATTTTTGTGATGAAT CCATAATTGTTTCTAAGATACATTTGTTCTCCATTTCTGATGATGGAAAAATATGGGACTGGCTGTTGACTACTGAAGGGCATGCAGCAGACACTCAAAA GGATGATAAAAAGTTGCGGTTAGTCAATGATGACAGTAAAATATCATTTCCCGAGGCTACCTCTAACAGCATAATATCTTCTGCTGGTGGACGGGATCCA AATCTACGAAGGCAGCAGGTGCGTCTCAATGATAGTAAAAGCTGCCTGTCAAGTTCAATCCTCAATCAGGAAGATATGTTAATAAAAGTAAGTCTAAACT TACAAACTTGCTTTATAAGCTACATTTATTGCTCGAATGGCGAACTCAGAGTGGAAATATATAGAGAGAACTCAACCTTTAAATTTTTAGCCTAAATATG GAAATTCAAGAAATGTAATGGTTTTAAAACATACAACAACCAAGCCTTTTTAAAAATATTTTTGTATTATTCTAAGTTTTGCAAAGAAACAGATAGAGTG CCATTGTAGAATTTAATTCTCTCTTCATGTTTAACAACTTGACTTTATTTACTGCATCTAGCCCATGGTATTAATAATGTACTTGGCTAATTTTTTCTTT TTTCTGGTTCATATATTCCACCACTTGGGCAATGTGCTTATGCATGTATAAAACTTGTGTGCACTGACACATGCACGGATTATGGTACAGACAGTCTGCA TTGCTGTTTATTCCTCCCCTATTTATATATCTGTATGAACAAGTCCTGAATAGTCATTCCTTCCTAATCTTCCCTTCTCTCCAAGAAAATAAACAAGGTC AAGAAAGATGAGAAGGTTGTAATATTTGTCCAAATGTAACTAAGTTTCTTTCATCATTTGCACTTCACTGAAGTGAACATTGGTTGGGTCCAATGGGTTC TTTTTGCCTGGAGGCAGATATTAGGATCACACATTCCAAATTTGGCGTCCGAATTCTCATTATTTGACTTATGATCTTAGCGACGATCTGATTCAGACTT TTCTATGCTGAAAAATTGCATTTAAATGTTGGGTAGAACCTATATGGATTTTATGTGTTGTCTTCAAGATTTTGAAGTTAACCAATATATGTAAATGGCT TTTTCCCTTTGTTCTAATGTAGATTAGCTTAGTTGGACAGCTTCAGCTTCTCTCATCAACGGTGACTATGCTGGCAGTACCAACCCCTTCTCTAACAGCC ACTCTGGCCCGTTAGTTTATCTTCTCACAAATTTACATATATCACTCAAACCTAGAATTTTCCTTCTATAGAGGTTATTATGCTTAGTATGTTTTTGTGT TGATTAATGAGATAATGTTATTTGAAGGTGGAGGAAATTATCCTGCAGCAGCTGTTCCCCTGGTTGCTTTGGGAACACAGAATGGGACAATAGAGGTTGT TGATGTTTCTGCCAATTCTGTTGCATCAAGTTTATCTGTACATAATGGTATTGTTAGGGGACTTCGATGGCTAGGAAATTCTAGGCTGGTTTCATTTTCC TATAGCCAGGCTAATGAAAAATCTGGAGGATATATTAACAAGCTAGCTGTGACCTGCCTTCGAAGTGGCGTTAACAAGATGTTCCGAGTTTTGCAGAAGC CAGAACGTGCACCAATAAGAGCTTTGAGAACATCTTCGTCTGGAAGGTATCTTCTAATTTTGTTTCGTGATGCACCCGTGGAGGTTTGGGCAATGACTAA AAGTCCTATAATGCTTAGATCGTTAGCTCTTCCATTTACGGTATTGGAATGGACTCTTCCAACAGTTCCACGTCCTGCTCAAAATGCAGCTTCTAGAGAT TCATCTCTGTTATCTAAGGAGCAAACGTCTAGTGCATCAGATGAAGCGCCTACACCATCAAATATTTCCTCATCCGATTCAAGTGGGTTGTTTGCTTGAA GTGCTTAGATATTATCTGAATCGTTGCTTGTCTAGAATTAATCTTTCATTCCTTTTTTGTGCAAGATTAAAAGTATTTTATTCATAAGTTAATATCTCTT ACCGCAGAGGGTTCAAGCACAGAG BLAST |
Tissue | pods |
Gene name | LI_gene_193646; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_506875
Blastp | WD repeat-containing protein 11 from Homo with 25.31% of identity |
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Blastx | WD repeat-containing protein 11 from Mus with 30.82% of identity |
Eggnog | WD repeat domain 11(ENOG410XT4R) |
Kegg | Link to kegg annotations (55717) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440300.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |