Ll_transcript_506885

• Id Trinity: TRINITY_DN52552_c0_g1_i18
• Name Transcript: Ll_transcript_506885
• Sequence: CAGCAATAACACTTGAACCAACAACCCCTTCATCTTCATCATCATCATCATCATCATCATGGGATTCAATGCTCCCTGGTCCACCAAACCGCAACAACTT TGGCTCTTCAGATCTCAGTCCTCACGGCCTTCTCGCTTTCCCTTCTGGAAGTTCCTTATCTATCATCGATACTCGTTCCATGCAACTTCTTTCTTCTTTT CCCATTCCTCCACCTTCTTCTGCCACGTCATCACTTTCTCCTTTTGTAACCGCTCTTCGCTGGACCCCACTCCCTCTCAACCGTGATCTCCTTTCTACGG AGCCTTCCTCTTCTCATCTCTTCCTCGCCGCCGGCGACCGCCAAGGCCGTATCGCGCTCCTCGACTTTCGACTCAAATCGGCGGTGCTGTGGTTTGATAC TGACTCTAGGTTAGGTGTTCAAGATCTGTGTTGGCTTCAGGCACGACCTGATTTATATATAATTGCTGCGATTCATGGATCTTCTACGCTTTCTCTTTAT AATGCTTCCACTGGACGGTGTGTTTGGAAATACGATGCCTCGCCGGAATTCTTATCTTGTGTTCGCCGTGATCCATTTGATTCGCGCCGGATATGTGCGA TTGGACTCAAAGGTTTTCTTCTCTCTGTTGTCCTACTCGGTGATAGTGAGGAAAGCATTGTGATCAAGGAGCTTCAGATTCGGACTGATAGCAGCGAATT GATTAAGGTGGAGAGAGATGCTGCTTCTGCTGCTGGTACTGCAGCTGCGTTGCCTGCTTCGGCAGCGTTTCCGCTTTACACAGCTAGGTTCGCGTTTTCG CAGCAGTGGAGGCACATTTTGTTCGTTACATTTCCTAGGGAATTGGTCGTGTTTGATTTGCAGTATGAGACAGTGATCTTTACCAGTGCGTTGCCTCGTG GTTGCGGCAAGTTTCTTGATGTGTTGCCTGATCCAAATAATGACTGGATTTACTGTGCTCATATTGATGGCAAGCTCAGCACCTGGCGGAGGAAGCCTGG GGAACAAGTACATGTTATGTGCTCAATGGAAGAGTTAATGCCTTCAATTGGAACCTCTGTCCCTTCTCCTTCAATACTCTCTGTCCTTTTATGCCAATCA GATTCTACAATTCAGAACATCGGAATCAGTTATTCTGATGTTCCTAGTTCTCCTTACCTTCGTGAGGATTTTGACAATCCTTTTGATTTTTGTGATGAAT CCATAATTGTTTCTAAGATACATTTGTTCTCCATTTCTGATGATGGAAAAATATGGGACTGGCTGTTGACTACTGAAGGGCATGCAGCAGACACTCAAAA GGATGATAAAAAGTTGCGGTTAGTCAATGATGACAGTAAAATATCATTTCCCGAGGCTACCTCTAACAGCATAATATCTTCTGCTGGTGGACGGGATCCA AATCTACGAAGGCAGCAGGTGCGTCTCAATGATAGTAAAAGCTGCCTGTCAAGTTCAATCCTCAATCAGGAAGATATGTTAATAAAAGTAAGTCTAAACT TACAAACTTGCTTTATAAGCTACATTTATTGCTCGAATGGCGAACTCAGAGTGGAAATATATAGAGAGAACTCAACCTTTAAATTTTTAGCCTAAATATG GAAATTCAAGAAATGTAATGGTTTTAAAACATACAACAACCAAGCCTTTTTAAAAATATTTTTGTATTATTCTAAGTTTTGCAAAGAAACAGATAGAGTG CCATTGTAGAATTTAATTCTCTCTTCATGTTTAACAACTTGACTTTATTTACTGCATCTAGCCCATGGTATTAATAATGTACTTGGCTAATTTTTTCTTT TTTCTGGTTCATATATTCCACCACTTGGGCAATGTGCTTATGCATGTATAAAACTTGTGTGCACTGACACATGCACGGATTATGGTACAGACAGTCTGCA TTGCTGTTTATTCCTCCCCTATTTATATATCTGTATGAACAAGTCCTGAATAGTCATTCCTTCCTAATCTTCCCTTCTCTCCAAGAAAATAAACAAGGTC AAGAAAGATGAGAAGGTTGTAATATTTGTCCAAATGTAACTAAGTTTCTTTCATCATTTGCACTTCACTGAAGTGAACATTGGTTGGGTCCAATGGGTTC TTTTTGCCTGGAGGCAGATATTAGGATCACACATTCCAAATTTGGCGTCCGAATTCTCATTATTTGACTTATGATCTTAGCGACGATCTGATTCAGACTT TTCTATGCTGAAAAATTGCATTTAAATGTTGGGTAGAACCTATATGGATTTTATGTGTTGTCTTCAAGATTTTGAAGTTAACCAATATATGTAAATGGCT TTTTCCCTTTGTTCTAATGTAGATTAGCTTAGTTGGACAGCTTCAGCTTCTCTCATCAACGGTGACTATGCTGGCAGTACCAACCCCTTCTCTAACAGCC ACTCTGGCCCGTTAGTTTATCTTCTCACAAATTTACATATATCACTCAAACCTAGAATTTTCCTTCTATAGAGGTTATTATGCTTAGTATGTTTTTGTGT TGATTAATGAGATAATGTTATTTGAAGGTGGAGGAAATTATCCTGCAGCAGCTGTTCCCCTGGTTGCTTTGGGAACACAGAATGGGACAATAGAGGTTGT TGATGTTTCTGCCAATTCTGTTGCATCAAGTTTATCTGTACATAATGGTATTGTTAGGGGACTTCGATGGCTAGGAAATTCTAGGCTGGTTTCATTTTCC TATAGCCAGGCTAATGAAAAATCTGGAGGATATATTAACAAGCTAGCTGTGACCTGCCTTCGAAGTGGCGTTAACAAGATGTTCCGAGTTTTGCAGAAGC CAGAACGTGCACCAATAAGAGCTTTGAGAACATCTTCGTCTGGAAGGTATCTTCTAATTTTGTTTCGTGATGCACCCGTGGAGGTTTGGGCAATGACTAA AAGTCCTATAATGCTTAGATCGTTAGCTCTTCCATTTACGGTATTGGAATGGACTCTTCCAACAGTTCCACGTCCTGCTCAAAATGCAGCTTCTAGAGAT TCATCTCTGTTATCTAAGGAGCAAACGTCTAGTGCATCAGATGAAGCGCCTACACCATCAAATATTTCCTCATCCGATTCAAAGGGTTCAAGCACAGAGG GGTCTCAGGACGACACTTCTGAAAGTTTTGCATTTGCTCTGGTGAATGGGGCTCTTGGAGTTTTTGAAGTACAAGGTCGAAGAATTCGAGACTTCAGACC CAAGTGGCCTTCGTCTTCCTTCGTATCATCAGATGGATTGATTACTGCAATGGCCTACCGCTTGCCTCATGTGGTCATGGGAGACAGAATAGGGAACATA AGATGGTGGGATGTGACAACTGGACAATCTTCCTCATTCAACACTCACAG
• Tissue: pods
• Gene name: LI_gene_193646;
• Additional information: details;

Expression of Ll_transcript_506885

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0
• PS3: 0
• PW1: 0.2
• PW2: 0.2
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_506885

• Blastp: WD repeat-containing protein 11 from Homo with 25.31% of identity
• Blastx: WD repeat-containing protein 11 from Mus with 30.55% of identity
• Eggnog: WD repeat domain 11(ENOG410XT4R)
• Kegg: Link to kegg annotations (55717)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440300.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;