Ll_transcript_506892

• Id Trinity: TRINITY_DN52552_c0_g1_i25
• Name Transcript: Ll_transcript_506892
• Sequence: CAGCAATAACACTTGAACCAACAACCCCTTCATCTTCATCATCATCATCATCATCATCATGGGATTCAATGCTCCCTGGTCCACCAAACCGCAACAACTT TGGCTCTTCAGATCTCAGTCCTCACGGCCTTCTCGCTTTCCCTTCTGGAAGTTCCTTATCTATCATCGATACTCGTTCCATGCAACTTCTTTCTTCTTTT CCCATTCCTCCACCTTCTTCTGCCACGTCATCACTTTCTCCTTTTGTAACCGCTCTTCGCTGGACCCCACTCCCTCTCAACCGTGATCTCCTTTCTACGG AGCCTTCCTCTTCTCATCTCTTCCTCGCCGCCGGCGACCGCCAAGGCCGTATCGCGCTCCTCGACTTTCGACTCAAATCGGCGGTGCTGTGGTTTGATAC TGACTCTAGGTTAGGTGTTCAAGATCTGTGTTGGCTTCAGGCACGACCTGATTTATATATAATTGCTGCGATTCATGGATCTTCTACGCTTTCTCTTTAT AATGCTTCCACTGGACGGTGTGTTTGGAAATACGATGCCTCGCCGGAATTCTTATCTTGTGTTCGCCGTGATCCATTTGATTCGCGCCGGATATGTGCGA TTGGACTCAAAGGTTTTCTTCTCTCTGTTGTCCTACTCGGTGATAGTGAGGAAAGCATTGTGATCAAGGAGCTTCAGATTCGGACTGATAGCAGCGAATT GATTAAGGTGGAGAGAGATGCTGCTTCTGCTGCTGGTACTGCAGCTGCGTTGCCTGCTTCGGCAGCGTTTCCGCTTTACACAGCTAGGTTCGCGTTTTCG CAGCAGTGGAGGCACATTTTGTTCGTTACATTTCCTAGGGAATTGGTCGTGTTTGATTTGCAGTATGAGACAGTGATCTTTACCAGTGCGTTGCCTCGTG GTTGCGGCAAGTTTCTTGATGTGTTGCCTGATCCAAATAATGACTGGATTTACTGTGCTCATATTGATGGCAAGCTCAGCACCTGGCGGAGGAAGCCTGG GGAACAAGTACATGTTATGTGCTCAATGGAAGAGTTAATGCCTTCAATTGGAACCTCTGTCCCTTCTCCTTCAATACTCTCTGTCCTTTTATGCCAATCA GATTCTACAATTCAGAACATCGGAATCAGTTATTCTGATGTTCCTAGTTCTCCTTACCTTCGTGAGGATTTTGACAATCCTTTTGATTTTTGTGATGAAT CCATAATTGTTTCTAAGATACATTTGTTCTCCATTTCTGATGATGGAAAAATATGGGACTGGCTGTTGACTACTGAAGGGCATGCAGCAGACACTCAAAA GGATGATAAAAAGTTGCGGTTAGTCAATGATGACAGTAAAATATCATTTCCCGAGGCTACCTCTAACAGCATAATATCTTCTGCTGGTGGACGGGATCCA AATCTACGAAGGCAGCAGGTGCGTCTCAATGATAGTAAAAGCTGCCTGTCAAGTTCAATCCTCAATCAGGAAGATATGTTAATAAAAATTAGCTTAGTTG GACAGCTTCAGCTTCTCTCATCAACGGTGACTATGCTGGCAGTACCAACCCCTTCTCTAACAGCCACTCTGGCCCGTGGAGGAAATTATCCTGCAGCAGC TGTTCCCCTGGTTGCTTTGGGAACACAGAATGGGACAATAGAGGTTGTTGATGTTTCTGCCAATTCTGTTGCATCAAGTTTATCTGTACATAATGGTATT GTTAGGGGACTTCGATGGCTAGGAAATTCTAGGCTGGTTTCATTTTCCTATAGCCAGGTATTTTATATTTTGGTACTTATGTTTGAAAAGTGTTTCATAT GTTATTTTCCTACACGGTTTACTTCTTCAAGTTGCGATCTTTGTTTTGTAAGTATTGCATCACGTCTCTCTGCAGGATAAGCTTTATGATTGGAGCATAT TACATCATGTTTGGTTCATTATAATTTCATATTGTTTTAAAGCTTTTCTTTGTCGTTGTTCATTTGTTATGCATGTTTTTTGAGCTCAGGCTAATGAAAA ATCTGGAGGATATATTAACAAGCTAGCTGTGACCTGCCTTCGAAGTGGCGTTAACAAGATGTTCCGAGTTTTGCAGAAGCCAGAACGTGCACCAATAAGA GCTTTGAGAACATCTTCGTCTGGAAGGTATCTTCTAATTTTGTTTCGTGATGCACCCGTGGAGGTTTGGGCAATGACTAAAAGTCCTATAATGGTAGGTT GGCAGTGAACTAGAACCCACTCCCTTTCTCAATATTTGTTGTATGTGATGTGGTATCTGGCTTAAGTGCATATATTCTTGAGTGGAAGTACTTAAGTAGG CTCTTGGTGATACTGTAATGCTCATTGTTGACTCTTAATATTGAAACTTCCTTTCTTTGGAGTACTTTACTTGCTTTATATGTTTTGGTCTCTATTTGAT GTGGAATGATAACTCATGTTTCAGTACACATGATTTTGATGAATTTTATCTGAGATCATATTTTGTGCACTATCAAATAGGGACAAGGTTTGTAATATAT ACATGCTTATATATATATATATAGTCTTCTAAACTGGCATTCCAGTTAATTCTGAGTTGTTGGTGCTGTTTTGGTAGAGCTAGCCATTACATGGACTCAG ATATAGATTTTGCTAGTAATGCTGATCTCAAGTATGACTTGGTTAATACTAGCTGATTTCCATTTCCCATTACTTTCAGAACCATTACTTGTAAGAGAAA CATTACTTTCACGGTTAATTTTGATGGCCTTAGTATAGCTGTTATATATTTCATCTGGATATTTATAATTCTTGCTATCTCTATGTAGCTTAGATCGTTA GCTCTTCCATTTACGGTATTGGAATGGACTCTTCCAACAGTTCCACGTCCTGCTCAAAATGCAGCTTCTAGAGATTCATCTCTGTTATCTAAGGAGCAAA CGTCTAGTGCATCAGATGAAGCGCCTACACCATCAAATATTTCCTCATCCGATTCAAAGGGTTCAAGCACAGAGGGGTCTCAGGACGACACTTCTGAAAG TTTTGCATTTGCTCTGGTGAATGGGGCTCTTGGAGTTTTTGAAGTACAAGGTCGAAGAATTCGAGACTTCAGACCCAAGTGGCCTTCGTCTTCCTTCGTA TCATCAGATGGATTGATTACTGCAATGGCCTACCGCTTGCCTCATGTGGTCATGGGAGACAGAATAGGGAACATAAGATGGTGGGATGTGACAACTGGAC AATCTTCCTCATTCAACACTCACAGAGAAGGAATTCGGCGAATCAAATTCTCACCTTTTGTACCAGGGGACCATAGCCGGGGGCGTATTGCTGTTCTGTT TTATGATAATACATTTTCTGTATTTGATTTGGATTCACCAGACCCCTTAGCCAATTCACTTTTGCAACCGCAATTTCCAGGAACCCTTGTGTTGGAGCTT GATTGGTTGCCCCTGCGAACAGATAAGAATGACCCGCTGGTACTGTGCATTGCTGGAGCAGATAGTAGTTTTCGCCTTGTTGAAATTACCGCAAATGATA AACGATCCGGTCATGTACCCCGTATCAGAAATATAAAGGAGAGATTTCGGTCGATGCCTATATGCTGTCCCATAATACTTCCTACACCACACGCTCTGGC AGTGCGCATGATCTTGCAATTGGGTGTCAAACCTTCTTGGTTTAATACCTGCAGTACTACCATAAAAAAGAGGCCTCACTTAATTCCAGGAACTCCTTCA TCTGTGGGGGATCTTCGCACATACATGATCAACATACCGCCTCTTGGTGACTCTGTGGTGCCAGAGATGCTTTTAAAAGTATTGGAACCATATCGAAAAG AAGGTTGCATACTCGACGATGAGAGAGCCAAGTTGTATGCTAGTATTTTGGACAAAGGTTGTGCTGCAAGGTTTGCCTTTGCAGCTACAATATTTGGTGA ATCGTCAGAAGCTCTGTTTTGGTTACAGCTGCGTCGTGCTTTTAAAGATGCGATGAATAAGCTATGGAGAAAGCCTCCACTGAAAGGGCCATCAGAGGAA TCTGTCTCTGAGGTTGACGAGACATCTTTACTGTCTAGGATATCATCAAAAGGGAAACCAACAGAAGAAATGGGAGGATGTGTACTGAGTCAAGGTCAGC TAAGGTTGATGACTTTTGACCAGGAAGAGTTGTGGAAAAGTGCTAGTGAGCGAATTTCTTGGCATGAAAAACTAGAAGGGGAAGAAGCTATACAGAAACG TGTACACGAGCTTGTCTCAGTTGGAAACCTAGAAGTTGCAGTCAGTTTATTGCTTTCTACTCCTCCAGAAAGCTCTTACTTCTATGTGAATGCTCTTCGC GCATTTGCTTTATCTTCTGCTGTTTCAAGGTCTCTTCATGAACTTGCAGTCAAGGTTGTTGCAGCCAACATGGTGAGGGCTGATAGGTCACTGTCCGGTA CTCATCTTCTCTGTGCAGTTGGAAGATATCAAGAAGCATGTTCTCAGCTACAAGATGCCGGATGCTGGACAGATGCTGCAACCTTAGCTGCTAGTCACTT ACAAGGATCAGATTATGCAAGAGTGTTACAAAGGTGGGCTGGATATGTCCTGTACACAGAACATAATATCTGGAGGGCTTTAATTTTGTATGTTGCCGCT GGTGCACTACAAGAGGCATTGACAGCTCTCCGGAAGGCTCAACTACCTGACACAGCTGCAATGTTTATCCTTGCATGCCGTGAAATCCAT
• Tissue: pods
• Gene name: LI_gene_193646;
• Additional information: details;

Expression of Ll_transcript_506892

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.1
• PS2: 0.8
• PS3: 0.2
• PW1: 0.2
• PW2: 0.1
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_506892

• Blastp: WD repeat-containing protein 11 from Homo with 25.31% of identity
• Blastx: WD repeat-containing protein 11 from Mus with 29.61% of identity
• Eggnog: WD repeat domain 11(ENOG410XT4R)
• Kegg: Link to kegg annotations (55717)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440273.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;