Id Trinity | TRINITY_DN52552_c0_g1_i26 |
---|---|
Name Transcript | Ll_transcript_506893 |
Sequence | CAGCAATAACACTTGAACCAACAACCCCTTCATCTTCATCATCATCATCATCATCATCATGGGATTCAATGCTCCCTGGTCCACCAAACCGCAACAACTT TGGCTCTTCAGATCTCAGTCCTCACGGCCTTCTCGCTTTCCCTTCTGGAAGTTCCTTATCTATCATCGATACTCGTTCCATGCAACTTCTTTCTTCTTTT CCCATTCCTCCACCTTCTTCTGCCACGTCATCACTTTCTCCTTTTGTAACCGCTCTTCGCTGGACCCCACTCCCTCTCAACCGTGATCTCCTTTCTACGG AGCCTTCCTCTTCTCATCTCTTCCTCGCCGCCGGCGACCGCCAAGGCCGTATCGCGCTCCTCGACTTTCGACTCAAATCGGCGGTGCTGTGGTTTGATAC TGACTCTAGGTTAGGTGTTCAAGATCTGTGTTGGCTTCAGGCACGACCTGATTTATATATAATTGCTGCGATTCATGGATCTTCTACGCTTTCTCTTTAT AATGCTTCCACTGGACGGTGTGTTTGGAAATACGATGCCTCGCCGGAATTCTTATCTTGTGTTCGCCGTGATCCATTTGATTCGCGCCGGATATGTGCGA TTGGACTCAAAGGTTTTCTTCTCTCTGTTGTCCTACTCGGTGATAGTGAGGAAAGCATTGTGATCAAGGAGCTTCAGATTCGGACTGATAGCAGCGAATT GATTAAGGTGGAGAGAGATGCTGCTTCTGCTGCTGGTACTGCAGCTGCGTTGCCTGCTTCGGCAGCGTTTCCGCTTTACACAGCTAGGTTCGCGTTTTCG CAGCAGTGGAGGCACATTTTGTTCGTTACATTTCCTAGGGAATTGGTCGTGTTTGATTTGCAGTATGAGACAGTGATCTTTACCAGTGCGTTGCCTCGTG GTTGCGGCAAGTTTCTTGATGTGTTGCCTGATCCAAATAATGACTGGATTTACTGTGCTCATATTGATGGCAAGCTCAGCACCTGGCGGAGGAAGCCTGG GGAACAAGTACATGTTATGTGCTCAATGGAAGAGTTAATGCCTTCAATTGGAACCTCTGTCCCTTCTCCTTCAATACTCTCTGTCCTTTTATGCCAATCA GATTCTACAATTCAGAACATCGGAATCAGTTATTCTGATGTTCCTAGTTCTCCTTACCTTCGTGAGGATTTTGACAATCCTTTTGATTTTTGTGATGAAT CCATAATTGTTTCTAAGATACATTTGTTCTCCATTTCTGATGATGGAAAAATATGGGACTGGCTGTTGACTACTGAAGGGCATGCAGCAGACACTCAAAA GGATGATAAAAAGTTGCGGTTAGTCAATGATGACAGTAAAATATCATTTCCCGAGGCTACCTCTAACAGCATAATATCTTCTGCTGGTGGACGGGATCCA AATCTACGAAGGCAGCAGGTGCGTCTCAATGATAGTAAAAGCTGCCTGTCAAGTTCAATCCTCAATCAGGAAGATATGTTAATAAAAATTAGCTTAGTTG GACAGCTTCAGCTTCTCTCATCAACGGTGACTATGCTGGCAGTACCAACCCCTTCTCTAACAGCCACTCTGGCCCGTGGAGGAAATTATCCTGCAGCAGC TGTTCCCCTGGTTGCTTTGGGAACACAGAATGGGACAATAGAGGTTGTTGATGTTTCTGCCAATTCTGTTGCATCAAGTTTATCTGTACATAATGGTATT GTTAGGGGACTTCGATGGCTAGGAAATTCTAGGCTGGTTTCATTTTCCTATAGCCAGGCTAATGAAAAATCTGGAGGATATATTAACAAGCTAGCTGTGA CCTGCCTTCGAAGTGGCGTTAACAAGATGTTCCGAGTTTTGCAGAAGCCAGAACGTGCACCAATAAGAGCTTTGAGAACATCTTCGTCTGGAAGGTATCT TCTAATTTTGTTTCGTGATGCACCCGTGGAGGTTTGGGCAATGACTAAAAGTCCTATAATGGTAGGTTGGCAGTGAACTAGAACCCACTCCCTTTCTCAA TATTTGTTGTATGTGATGTGGTATCTGGCTTAAGTGCATATATTCTTGAGTGGAAGTACTTAAGTAGGCTCTTGGTGATACTGTAATGCTCATTGTTGAC TCTTAATATTGAAACTTCCTTTCTTTGGAGTACTTTACTTGCTTTATATGTTTTGGTCTCTATTTGATGTGGAATGATAACTCATGTTTCAGTACACATG ATTTTGATGAATTTTATCTGAGATCATATTTTGTGCACTATCAAATAGGGACAAGGTTTGTAATATATACATGCTTATATATATATATATAGTCTTCTAA ACTGGCATTCCAGTTAATTCTGAGTTGTTGGTGCTGTTTTGGTAGAGCTAGCCATTACATGGACTCAGATATAGATTTTGCTAGTAATGCTGATCTCAAG TATGACTTGGTTAATACTAGCTGATTTCCATTTCCCATTACTTTCAGAACCATTACTTGTAAGAGAAACATTACTTTCACGGTTAATTTTGATGGCCTTA GTATAGCTGTTATATATTTCATCTGGATATTTATAATTCTTGCTATCTCTATGTAGCTTAGATCGTTAGCTCTTCCATTTACGGTATTGGAATGGACTCT TCCAACAGTTCCACGTCCTGCTCAAAATGCAGCTTCTAGAGATTCATCTCTGTTATCTAAGGAGCAAACGTCTAGTGCATCAGATGAAGCGCCTACACCA TCAAATATTTCCTCATCCGATTCAAAGGGTTCAAGCACAGAGGGGTCTCAGGACGACACTTCTGAAAGTTTTGCATTTGCTCTGGTGAATGGGGCTCTTG GAGTTTTTGAAGTACAAGGTCGAAGAATTCGAGACTTCAGACCCAAGTGGCCTTCGTCTTCCTTCGTATCATCAGATGGATTGATTACTGCAATGGCCTA CCGCTTGCCTCATGTGGTCATGGGAGACAGAATAGGGAACATAAGATGGTGGGATGTGACAACTGGACAATCTTCCTCATTCAACACTCACAGAGAAGGA ATTCGGCGAATCAAATTCTCACCTTTTGTACCAGGGGACCATAGTCGAGGGCGTATTGCTGTTCTGTTTTATGATAATACCTTCTCTGTATTTGATTTGG ACTCACCAGACCCCTTGGCCCATTCACTTTTGCAACCTCAATTTCCTGGAACCCTTGTGTTGGAACTTGATTGGTTGCCCTTGCGAACAGACGAGACTGA CCCGCTCGTTCTGTGCATTGCTGGAGCAGATAGTAGCTTTCGCCTTGTTCAACTTACCGCAAATGATAAACGATCTGGTCATGTACCCCGTATCAGAAAG ATAAAGGAGAGATTTCGGTCAATGCCTATATGTTGTCCCATAATACTTCCTACACCACATGCTTTGGCAGTGCGCATGATCTTGCAATTGGGTGTCAAAC CTTCTTGGTTTAATACCTGTAGCACTACCATAAAAAAGAGGCCTCACTTAATTCCAGGAACTCCATCATCTGTGGGGGATTTTCGAACTTACATGATCAA TATACCACCTCTTGGTGACTCTGTGGTGCCAGAGATGCTTTTAAAAGTATTGGAACCATATCGAAAAGAAGGTTGCATACTCGATGATGAGAGAGCCAAG TTGTATGCCAGGATTGTGGATAAAGGTTGCGCTGCAAGGTTTGCCTTTGCAGCTACAATATTTGGTGAATCGTCAGAAGCTCTGTTTTGGCTACAGCTGC CCCGTGCTTTTAAATATATGATGAATAAGCTATTGAGAAAGCCTCCACTGACGGTGCCCTCAGAGGAATATGTGTCTGAGGTTGATGAGACATCTTTATT GTCTAGGATATCATCAAAGGGGAAACCAACAGAAGAAATGGGGGGAGGTGTATTGAGTCAAGGTCAGCTAAGGGTGATGACTTTTGATCGAGAAGAGTTG TGCAAAAGTGCCAGTGAGCGAATTTCTTGGCATGAAAAGCTAGAAGATGAAGAATCAATACAGAAACGTGTACACGGGCTCGTATCAGTTGGAAACCTAG AAGTCGCAGTCAGTTTATTGCTTTCTACTCCTCCAGAAAGCTCTTACTTCTATGTGAATGCTCTTCGTGCAGTTGCTCTTTCTTCTGCTGTTTCAAGGTC TCTTCATGAACTTGCAGTCAAGGTTGTTGCAGCCAACATGGTGAGGGCTGATAGGTCACTCTCTGGTACTCATCTTCTCTGTGCAGTTGGAAGATATCAA GAAGCGTGTTCTCAGGTTAGGACGTTTGTACTCACGGTGCTTTCTTAAACTGAGTATCAGAGTGCCAGATACATTAAATACTATAGAAAAAAATGTTGAT AAATTCTTTATATTTAAAATTACTGACTGATTCTACCAAATATTTTCCACTTTTGTACCAATAGACTATTGATTCTTTTATTCTCATGATTAAGCTTTCA TATCTTGGAGCGTTCAATTGATTAAAAAATTTTATGCACTGAAAGATGGGTTTATGTGGTTTTCAATAATTTAGTTACCCAAGAGCCGAGTTGACTTGAG CCAAGTAACTACTTTGTTGCGAGTTAGGTTTTGAGGAGAATAGAGGGAAAGGAAGGCTTAGGAGCCATGAAATATACTCGTGAGTTAGCTGAAACCTTTC ATTCCCCTCCAAAATCCAACTCGAACTTATCTGCCCCTATTCTAAATACATTACTTAAAGTGGAATTCCCTGAATAGGAAGGGACAACCATATTGTCTCT GCTGATCTTTGCAGTTGGGATTGAATAAATCCTCTTTTCTAGCTGATAAGACGAGTTGGCTATTCGGTGGAGGTCTGGAGGATAAACACACCCAGCATGA TAAGAGTTTGCTTACTCATTATCTTTAAACATCGGAATAGGCGAGGAGTGGTTATGGATGCGTGGTGTGAGCCCTTGTTTATCTATTTTATGGGCTCTTT CTTTTGCCCAAGCCATTAGGGGCTATTTGGGCTCTTTCTTTCCAACATAATTTAGGCTACACTGCAAGAGGCAAGGCATCTCCAGCCAAAATTTTACTAT CCCATTTTTTAATGAACAAGACCTCCAAGATTACGGAGGTACTTTCTGGGGACAATCATGGAAATCACTTTAGTCGGCTACAAACGATTCCTTCCTTACA AGCTCGGGGAATTTTTTGAACACTGTAGCATTTCCTAAATTAAAAGTTAACCGGAAGGTTATCAATATAATGTGCTTGATCTTTTCTTAGGGAAATTCAA TGTCTTATCTTAATTCTCATGCAGCTACAAGATGCCGGGTGCTGGACGGATGCTGCGACCTTAGCTGCTAGTCACTTGCAAGGATCAGATTATGCAAG BLAST |
Tissue | pods |
Gene name | LI_gene_193646; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_506893
Blastp | WD repeat-containing protein 11 from Mus with 32.43% of identity |
---|---|
Blastx | WD repeat-containing protein 11 from Homo with 21.82% of identity |
Eggnog | WD repeat domain 11(ENOG410XT4R) |
Kegg | Link to kegg annotations (207425) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440273.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |