Ll_transcript_506398

• Id Trinity: TRINITY_DN52553_c4_g1_i21
• Name Transcript: Ll_transcript_506398
• Sequence: ATTTACCAACCCCAGAATTGTATCAAGCAATCAAAACCCGATATTTTGAGATGAAAATGACAACTCGGAGAATTTGATGTTCTGGAAGAAAACGAACGCA GCAGCTTCCTCTTAAACTCGCTTCAGATTCGAAGGATCACCGCCGCCGCCACCGTTGTATCTTACAAGGTGCACCGACAATAACATTGAGGAGGTGGTAA TGGGTGGGAATAAGAAGAGGAAGAGAAAGGAAGAAGTGAAAGTGAAGTGCAAGTATTCAGAAAACTCACCAGATTTTACTCATTTAGCTTCTCTCTACCC TTCATTTCAACCTTTTCTTCATTACTCCTCGCGTCATAATTACCCTACCATCGATTGGACCGATTTTAACGCTACTCGTGAACTAACCCGTGTTTTGCTT CTTCACCACCACTCTCTCAACTGGTGGATTCCTGATGGACAGCTCTGCCCTACTGTGCCCAACAGGTCTAATTACATCTATTGGGTTGCTGATCTTCTCT CATCTGACATCATTCCAAATACCATTTCAAATGGAGGTAAGGTGAGGGGATTTGATATAGGAACAGGAGCAAACTGCATATACCCACTTCTGGGTGCAGC GCTTATGGGATGGAGTTTTGTAGGATCAGTTTGGTAAACGGATGCAGATGTGACTGATGTTGCAATAGAGTGGGCAGAGAAAAATGTTAATAGTAATCCA CAATTTTCTGAGTTGATTGAAATTAGAAAGGTTGAAAGCAATGAAAGTACTTTCTGTGTGGAAGAGTTGCATTCTGAAAAGCCAGTCCAGAGTAGAACCG AGATAAATTTGTGTGAGAGTATCAATACAGAGGTAGAACCTTTGCCTTCATTACCTCTTGATTCACACATCCTGGAGAATAAGAATTATCGTGGACCTAC CATACTTCTTGGCGTAGTAAGGGATGATGAGAAGTTTGACTTTTGCATGTGTAATCCACCTTTTTTTGAAAGTTTGGAGGAAGCAGGACTTAATCCTAAA ACTTCTTGTGGAGGCACTTCGAAAGAAATGGTTTGCCCTGGTGGCGAAAAGGCCTTCATTACTCGTATTATTGAAGACAGTACTGAACTGAAGCATCAAT TTCGGTGGTTCACTTCAATGATAGGGAGAAAGACAAATCTCAAGTACCTTACATCAAAACTTTGGGAGGTTGGTGTTACCATAGTTAAGACAACCGAATT TGTCCAAGGCAGGACATCCCGATGGGGCCTTGCTTGGTCTTTCTTGCCTCCTATACAGAAGTCATCAATTTCTTTACCTGAGAAGAAGAGTAACATTTCC TTTCTGGTCGAGGATCTTCCATCCCAACATGGTGCCTTTAATGTTTTGGAAGCCATCAAGTCTTACTTCTCTTTGTATGGCCTATCATGTACATTGAATC CCTCCTCTTTCACGGTGGATGTCCTGGCGTCCAAAGATTACTGTGATTCAATCTTGAAGAATGAATTACCGATTATCAATAAATCCATCAATTGTCAACC TTCAGGAGAGACATCTAATGGATCAAGTTTGAATTCCTCCGCTGATAGATTAGGCCTCCGTATATCGGTTTTTCAGCAAAGCCGTAGGACACTGTTGGTG AAAGGTTCATTACAAGATAGGAATAGCCCATTATCAGGAGCATTCTCAGTGATATTCCAAAAGCTGGAGGAAGCTTTGCGAAATAAATTTTATACAAAAT TGGCCTGATGGTTTAGTTATTTGACTTATCACTTACAAGTTATAGGACTGAGTGATTGGATGATATGTTGTCGAATGGAGATAAGTTCATGAGTGCTATA TAGTCGGGGCCACGGTTTGTAGAATACATAACTGAAATCGCACTTGACGTAGAATGGAAATAGAGCACAACAATCATTTCCAAAGACACTATTGCTCAAC AACAATCAAGCCTTAATCTTGAGGCAGTGTTCCTCCTTGTAACATTTTTGGTAGATCATGTATATTTATTTTTGTACCAAACCGCTTAGAACTATTCATT TGGTTTGAAAATTGTCCTAAGTGGGATCTGTATTTAAAAATACCAAACTGTCATTTTGTACATGGTACATGGTATCTGCTTATTTTTTACTCAGTATTTG CATCTATGGTGGCAAAAATAACATGTCCATTATTATCTCAAAA
• Tissue: pods
• Gene name: LI_gene_193660;
• Additional information: details;

Expression of Ll_transcript_506398

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0.3
• PS3: 0
• PW1: 0
• PW2: 0.5
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_506398

• Blastp: U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase from Xenopus with 41.89% of identity
• Blastx: U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase from Danio with 33.84% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (443759)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460068.1)
• Pfam: Protein of unknown function (DUF890) (PF05971.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;