| Id Trinity | TRINITY_DN52554_c0_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_505606 |
| Sequence | CATATATCTTCAATAACATAGCGTAGTGCAAGAGACTTTTATCTTAATATTTTCACCTCTTTCACTTTCTTTCATTCTTGCCATTCGAAATAACTAAAAG ATGGCAAGCATAGCTGAGTCATTTGCTTCAAAAGTTGCTGATGTGATTGTTGGACAAGTTGGATATGGGATTGGTTTCATATTCAACTATGAGAGGAACA TTGACAACATCAGTGCCAATGTTGAAAAGTTGGAGGAGGCCAAAGATGCTATCCAACACTCTGTTGATGAGGCTACAAGGAAAGGAGAAGATATTGAGAG AATGGTGAATAATTGGTTGGAGAGAGTGGATGCAATTCTCACTGAGGCAATGAATTTTCAAATGGCTGAAGGGCATGCAAAAGCACAATGTTCCTGTGTC CATTTTCCTGATATATGGACAAGGCACAAGCTGAGTAAGAAAGCTAAAGAGATAGAAAAAGACATTCTTGAAGCCATAGATGATGGCAACTTCCAAAAAT TTTCTTACCAGCCTCGTTTGCTCGTTGGAATCACTTCTTCAAATGCTAGAGGTTATGAGGCGCTGAATTCAAGAACAAATATCATGAATAAGATTGTGCA GACACTGATGGATGTTGAAGTGTGCAAGACTGGAGTGTGTGGAATGGGTGGTGTGGGTAAATCCACACTAGTCAAGGAGTTGGCATGGAAAGCAGTACAA GATTGTTCATTTCACACTGTGGTTTCGGTTGAACTAACTGAATCTCCTGATGTCAAATCAATTCAAGTTAAAATTGCTGAATGTTTGGGCATGAAAAAAT TCGAGGTGGACACAATAAATGTCAGAGCAAGTCTGTTACGCGAAAGGATACGTAAGGAGGAAAGTATTTTGATTATAATGGATAATATATGGGAGAAACT TGATTTGATAGAAGTTGGGGTGCCTTTTGGTGATGATCACAAAGGATGCAAGTTATTTTTTACCTCAAGAAGTCTTCATGTTTTGACAGAAGAGATGGGC GTTGATGAACAATATTGTTATAAACTTGATGTCTTATCTAAAGACGAGAGTTGGGACTTATTTGAGAAGAAGGTTGGTGATGCCGTTAATGATTCCAAAT TAAGGCCTATTGCTGTGAAAGTAGTTGAAGCTTGTGGCGGTTTGCCCGTTCTCATATTTCCTGTGGCGAATGCATTGAAAAACAAGCGTAAGCCTATTTG GGATGAAGCTTTAAAACAACTGACAAGATTCGACAACAAAGATTTGAATGCTACTGTGTACTCGGCAATAAACTTGAGTTATGATCATCTAGCAAATGAT GAATTAAAATCATTCCTTTTGCTTCTTGGTTCGTTTGGACAAACTGAGATATGGACAAGATATTTGTTAATATATTTCTGGAGCCTAGACATATATGAAG ATGGTGATTGCTTGGCAAATGCAAGAAATAGGCTCTACAACTTGGTGAGAAAGCTAAGGTCAGCTTGTTTGTTGCTTGAAGAAGAAAAAAAAGAATCAGT TAAAATGCACGACCTTGTCCATGAAGTGGCTAGCAAACTTGCATCCAAAGATCGAACTATATTTGCCGTGAAAATACACAGCGAACTGAAAGAATGGCCC AAAATGGATACGCTTAGACAGTGCTACCGCATGTTCTTGCCTGATTGTCGTATGCATGACCTTCCCGAGAGATTGGAATGTCCAGAGTTGGAGATACTTG TACTTGTAAGTCGAAATAACTTTCTAAAAGTACCTGATAATTTTTTTGCAGGAACAAAAGAAATGAAGGTTCTGTATCTTGGAGGAATGGATTGCATCCC ATCCATTCCTTCATCTCTCTCTCGATTGCCAAAGCTTCGAGCATTGTACCTTCGTGAATGCATGCTGGAGGACATAGCTCTAGTTGCAGAACTCAAGAAT TTGGAGATTCTTGGCTTTGAAATTTCTGAGATTAGAAAGATCCCAGCAGTTATAGGGAAGCTTACTCGACTCAGGTTGCTAGATTTAAGCAATGTCTCAG GACTGAGAGCAATTCCTGCAAAACTCATATCAGGCTTACATCACTTGGAAGAGCTCTATACGATGAACACCTTTATACAATGGGAGGGCAAGAAGAGCAG AAACAAAAGCCAAAGTCAAAGCCAAAGCAACAATGCATCTCTTGATGAGCTACGACATTTAGATCAACTTAAAGCATTGGAGATTACTATTCAAGATGCT TCAGTTCTGCCTAAAGATTTACTCATCTTTGGTCAGTTGGACAAATACAAAATTTACATCGGTAGTGGTTGGAAACGTTCATGGAATAGAGAAATCTCTA AAACACTGAAGCTTGATCAAGGCAACACTAAAAATATTCACTTGGATGAAGGGGTCAAATTGTTGTTGAATAATGCTGAGGAGTTGTGCTTGACCAATTT GAATGGTGTCAGTAATGCCCTTTGCCAATTAAATGAAGAAGGATTCCCACAATTGATATATTTGGATATCGAAAACAGTAAGAGCCTTCAGTATATCATT GACACAAAACACCATTCATGTGAAGCCTTTCCCAAGCTTGAGTCTTTGGTTCTCCGCAATCTACCTAAGATGCAGAAAATATGTGACGGCCCACTTCCGG TACAGTCTTTCACCAAATTGAAAGTTATCAAAGTTAAAGGTTGCGATAAGTTGCAAAATGTTTTCTCCTATTCAACTGTTACAAGCCTTTCCAAACTTGT TGAATTAGAAATTTGTCAATGCAATGTTATGTGTGAGATCATTGCTGACACTGATACTAATATTGATGAGATTGAGTTCCCTCATTTGCATTCACTTACC ATAGATTGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_193664; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_505606
| Blastp | Disease resistance protein At4g27190 from Arabidopsis with 25.8% of identity |
|---|---|
| Blastx | Disease resistance protein RPS2 from Arabidopsis with 27.38% of identity |
| Eggnog | leucine Rich Repeat(COG4886) |
| Kegg | Link to kegg annotations (AT4G27190) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425392.1) |
| Pfam | NB-ARC domain (PF00931.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |