Ll_transcript_505607

• Id Trinity: TRINITY_DN52554_c0_g2_i6
• Name Transcript: Ll_transcript_505607
• Sequence: CTATCACTTCACTACACAACTTCATTCACATTCATTTTCTTCATAAAGCTGCTTTGATTCTGGAGCGTGTTGAAAGAGGTTGCTTCATACAGTTACACAG GCTAGGATCTTCACCTCAACACCTTCTCTAGATTGAACATTGATCAAGAAGGTTGATGGCTAGCGGTGCTGAATCATTTGCTTTAAAAGTTGCTAATGTG ATTGTTGGACAAGTTGGATATCAGATTGGTTACATAATCACTTATGAGAGGAACATTGACAACCTCAGTGTCAATGTTGTAAAGTTGGAGGAGGCCAAAG AAGCTATCCAACACTCTGTTGAAGAAGCCACAAGGAAAGGAGAAGATATTGAGAGAATGGTGAAGAACTGGTTGGAGAGAGTGGATGGAATTATGACTGA GGCAACGACTTTTCAAAAGGCGGAAGGGCATGCAAAAGCAGAATGTTCATGTGGCCGTTTTCCTGATATATGGACAAGGCACAAGCTGAGTAAGAAAGCT AAAGAGATAGAAAAAGACATTCTTGAAGCCATAGATGATGGCAACTTCCAAAAATTTTCTTACCAGCCTCGTTTGCTCGTTGGAATCACTTCTTCAAATG CTAGAGGTTATGAGGCGCTGAATTCAAGAACAAATATCATGAATAAGATTGTGCAGACACTGATGGATGTTGAAGTGTGCAAGACTGGAGTGTGTGGAAT GGGTGGTGTGGGTAAATCCACACTAGTCAAGGAGTTGGCATGGAAAGCAGTACAAGATTGTTCATTTCACACTGTGGTTTCGGTTGAACTAACTGAATCT CCTGATGTCAAATCAATTCAAGTTAAAATTGCTGAATGTTTGGGCATGAAAAAATTCGAGGTGGACACAATAAATGTCAGAGCAAGTCTGTTACGCGAAA GGATACGTAAGGAGGAAAGTATTTTGATTATAATGGATAATATATGGGAGAAACTTGATTTGATAGAAGTTGGGGTGCCTTTTGGTGATGATCACAAAGG ATGCAAGTTATTTTTTACCTCAAGAAGTCTTCATGTTTTGACAGAAGAGATGGGCGTTGATGAACAATATTGTTATAAACTTGATGTCTTATCTAAAGAC GAGAGTTGGGACTTATTTGAGAAGAAGGTTGGTGATGCCGTTAATGATTCCAAATTAAGGCCTATTGCTGTGAAAGTAGTTGAAGCTTGTGGCGGTTTGC CCGTTCTCATATTTCCTGTGGCGAATGCATTGAAAAACAAGCGTAAGCCTATTTGGGATGAAGCTTTAAAACAACTGACAAGATTCGACAACAAAGATTT GAATGCTACTGTGTACTCGGCAATAAACTTGAGTTATGATCATCTAGCAAATGATGAATTAAAATCATTCCTTTTGCTTCTTGGTTCGTTTGGACAAACT GAGATATGGACAAGATATTTGTTAATATATTTCTGGAGCCTAGACATATATGAAGATGGTGATTGCTTGGCAAATGCAAGAAATAGGCTCTACAACTTGG TGAGAAAGCTAAGGTCAGCTTGTTTGTTGCTTGAAGAAGAAAAAAAAGAATCAGTTAAAATGCACGACCTTGTCCATGAAGTGGCTAGCAAACTTGCATC CAAAGATCGAACTATATTTGCCGTGAAAATACACAGCGAACTGAAAGAATGGCCCAAAATGGATACGCTTAGACAGTGCTACCGCATGTTCTTGCCTGAT TGTCGTATGCATGACCTTCCCGAGAGATTGGAATGTCCAGAGTTGGAGATACTTGTACTTGTAAGTCGAAATAACTTTCTAAAAGTACCTGATAATTTTT TTGCAGGAACAAAAGAAATGAAGGTTCTGTATCTTGGAGGAATGGATTGCATCCCATCCATTCCTTCATCTCTCTCTCGATTGCCAAAGCTTCGAGCATT GTACCTTCGTGAATGCATGCTGGAGGACATAGCTCTAGTTGCAGAACTCAAGAATTTGGAGATTCTTGGCTTTGAAATTTCTGAGATTAGAAAGATCCCA GCAGTTATAGGGAAGCTTACTCGACTCAGGTTGCTAGATTTAAGCAATGTCTCAGGACTGAGAGCAATTCCTGCAAAACTCATATCAGGCTTACATCACT TGGAAGAGCTCTATACGATGAACACCTTTATACAATGGGAGGGCAAGAAGAGCAGAAACAAAAGCCAAAGTCAAAGCCAAAGCAACAATGCATCTCTTGA TGAGCTACGACATTTAGATCAACTTAAAGCATTGGAGATTACTATTCAAGATGCTTCAGTTCTGCCTAAAGATTTACTCATCTTTGGTCAGTTGGACAAA TACAAAATTTACATCGGTAGTGGTTGGAAACGTTCATGGAATAGAGAAATCTCTAAAACACTGAAGCTTGATCAAGGCAACACTAAAAATATTCACTTGG ATGAAGGGGTCAAATTGTTGTTGAATAATGCTGAGGAGTTGTGCTTGACCAATTTGAATGGTGTCAGTAATGCCCTTTGCCAATTAAATGAAGAAGGATT CCCACAATTGATATATTTGGATATCGAAAACAGTAAGAGCCTTCAGTATATCATTGACACAAAACACCATTCATGTGAAGCCTTTCCCAAGCTTGAGTCT TTGGTTCTCCGCAATCTACCTAAGATGCAGAAAATATGTGATGGCCCACTTTCGGTACAGTCTTTCACCAAATTGAAAGTTATCAAAGTTAAAGGTTGCG ATAAGTTGCAAAATGTTTTCTCCTATTCAACTGTTACAAGCCTTTCCAAACTTGTTGAATTAGAAATTTCTCAATGCAAAGTTATGTCTGAGATCATTGC TGACGCCGATATTGATATTGATGAGATTGAGTTCCCTCATTTGCATTCACTTACCATAGATTGTGTACCTAGTCTTGTTAGTTTCTATTCCAAGCCTGTG ACTAATGATATAGAATTGACAAGCATTGTTGAGTACGAGGATGACTCGACCATTCCAACACCACTATTTGATGAAAAGATTTCATTTCCCAACTTGGAGA GCTTGAAGATTTCTTCGATCAACTTGGTGACGATATGGGGTGATCGACTATCGGAACGTTCAACCGTAAAGAAGTTGCAGAGTTTGGCCATAAATGGTTG TGCAAACTTAAAGTCATTGTTCACATCATCTGTGGCTAGAGGGCTGGTGAATCTTCAACATCTCAGCATTAGTGGATGTGGAATGTTGGATGAGATATTT TCTGCAGAGACACTTCCTTCTACTAAAATATCAGTTTCAAATGATGAGGCTGCATTCCCTAGCTTGGAAACATTGACAGTCTCTAATATGGATAGCTTGA AGTCAATATGGAATGATCAATGGGCTTCAAATTCCTTTCCCAAGTTGATTACATTGGAAATATCATTCTGCAGTACATTAATAAATGTATTCCCTCCTTA TATGCTACCAACTCAATTGACAACTTTGACTTTGCAACATTTGCCAATGTTGGAGAACATATGGAGTACGGATCCTCATCGAAGCTCCGGGTTTCAAAAC CTGTGCAAAGTGGAAGTAACTGAATGCCAAAGCCTAAATCATGTCTTTCCACTCTGTATGGCTGTGGAGTTTACGAAACTCGAAGTGCTTGATATATCTA GTTGTGGTATAGAGCACATTGTTGGAAGTGATGAATTACGAGAGAAAGTTCCAAAACTTGATTTACCACAATTGAGATCCTTGAGACTTTGGCGTTTGAA AAATCTCAGAAGCTTTTGTTCCGAAATGCAGACCTTGGAATGTCCCAACTTAAAAGACATAGATGTGTATGATCATGGTATGTTGGAGATATTTGCACTG GACTCTCAAGACCCCCAAGATGCCTTAGTTGATCAACAACCTCTCTTCTCATTTGAAAAGGTTATTCAGAATTTGGAGGAATTATCTCTAAGCAGTGAGG ATGTAGC
• Tissue: pods
• Gene name: LI_gene_193664;
• Additional information: details;

Expression of Ll_transcript_505607

FPKM

• PAB: 0.2
• PNAB: 6
• PS1: 0.2
• PS2: 0.3
• PS3: 1.1
• PW1: 11.9
• PW2: 15.8
• PW3: 8.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_505607

• Blastp: Disease resistance protein At4g27190 from Arabidopsis with 25.94% of identity
• Blastx: Disease resistance protein At4g27190 from Arabidopsis with 25.46% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (AT4G27190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425392.1)
• Pfam: NB-ARC domain (PF00931.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;