Ll_transcript_507553

• Id Trinity: TRINITY_DN52555_c0_g1_i13
• Name Transcript: Ll_transcript_507553
• Sequence: CGATCAGTAGTTCATACTCTTGCTCGGACCTAACTACCACACACCCCACGTGATTCTCCCTCTCACTATATAAACTCCCTTCTCTCCACACTTCCTTCAC TTCCCTCTCTCTCTCTAACACGTAACCACCAACACCTAACTCTCTCTCTCTCTGTTTCTTCACGTCGTTCATAACTAATTACGCGCTCAAGGGAACCACT TATTTTGTACTAGATCTATCGGTTTCTTCTTCATGGCGACTGGACAACTGTTCTCCCGTACTACACAAGCTCTGTTTTACAATTACAAGCAACTTCCCAT CCAGCGGATGCTTGATTTTGACTTCCTTTGCGGTAGAGAAACACCATCAGTTGCTGGAATAATCAATCCTGGTTCTGAGGGATTTCAAAAGCTCTTTTTT GGTCAGGAGGAAATTGCAATCCCAGTTCATGCTACCATTGAAGCAGCTTGTGCTGCACATCCTACTGCTGATGTCTTTATCAATTTTGCATCATTTAGAA GTGCTGCCGCATCATCCTTGACTGCTTTGAAGCAGCCAACAATTAGAGTTGTTGCTATTATTGCTGAAGGAGTACCTGAGTCAGACACTAAGCAATTGAT TGCATATGCCCGATCAAACAATAAGGTTGTTATTGGCCCAGCCACTGTTGGTGGAATCCAAGCCGGTGCATTCAAGATTGGTGACACAGCTGGAACAATC GACAATATAATTCAATGCAAGCTCTACAGGCCTGGATCTGTTGGATTTGTTTCTAAATCTGTATGTTGTTAATTATGTTCATGTATATGTTGCTGTCATC TTTCTCGCATTGAGAATAGAACCCTTTTTGTTTAGTACGTAACTACATACCACCATGAAATTTCTGTTAATGTTTATGTGCTTGTGTTAAGGAGGTGAGG AATGTGTTCAAAACGTTTGCAAATGTATACATTCTACTAAGGATAATTGGGTATTGAGCATTTGATTAATAAGAACGGATTTTTTTAATGGATAGTTGTT ATACTGGAAAGGAGATTCGGGTCCATTTTTTTGCCCATAATCCTCATCCTGTATTACGAGGAACCTTGCAGACTATCCCCATGGGGGTTATGAAAGGAGC GCCCCAATTGGTAGGGAAAAAACCAGTAACTCCTTGAGAATCGTAGGAGAGATGACTATGAATTGTGTCCTTTTCTTGTATATACTAGTCCATTATGGCT TAGTTCATCTAAAATCTTGAAAAGTAGTATGGTCTACGGGAAATCTCCCGAATCCTTAATCTTCTTATAAGCTTATTGCATAGGTTCAATATATGAAGAT ATTGTTCACAGTAATTTGTCATTTGAGCTTTATTTCTATTGGTATGATATAATGTATACATTGATTGTTCTAATAAGAGAAGACAACCTTTTGAGTTGCA GGGTGGGATGTCCAATGAATTATACAACACCATTGCCCGTGTAACTGATGGGATTTATGAAGGCATTGCCATTGGAGGAGATGTTTTCCCAGGTTCCACA CTTTCTGACCATGTCTTACGGTATAACAACATACCACAGGTCAAAATGATCGTTGTACTTGGGGAACTTGGTGGGCGTGATGAGTATTCATTAGTGGAAG CTCTAAAACAAGGGAAAGTGACAAAACCAGTTGTTGCCTGGGTTAGTGGAACCTGTGCACGACTCTTCAAATCTGAAGTACAATTTGGTCATGCTGGAGC TAAGAGTGGTGGTGAGCTGGAGTCTGCTCAAGCAAAGAACCAGGCACTAAAGGAAGCTGGGGCTGCTGTTCCCACTTCATACGAAGCTTTTGAAGTTTCA ATTAAAGAAACATTTGACAAATTGGTTGAAGAAGGGAATATCACATCAGTGAAGGAATTTATTCCTCCACCAATCCCAGAGGACCTTAGCACCGCAATTA AGAGTGGAAAAGTTCGTGCTCCAACTCATATTATATCCACCATTTCTGATGACAGAGGTGAGGAGCCATGTTATGCTGGTGTGCCCATGTCTTCCATTAT TGAAAAAGGTTTTGGTGTGGGTGATGTTATCTCTCTTTTGTGGTTTAAACGCAGCCTACCTCGTTACTGTACTCAATTTATTGAGATATGCATCATGCTA TGTGCCGACCATGGTCCTTGTGTCTCCGGTGCACACAATACTATTGTCACAGCAAGGGCTGGAAAGGACTTAGTTTCCAGTCTCGTATCAGGTTTGCTTA CAATTGGCCCTCGATTTGGAGGTGCCATTGATGATGCTGCTCGCTACTTCAAGGATGCTCGTGACAGGAGTCTTACACCTTATGAGTTTGTTGAAAGTAT GAAGAAGAAGGGCATTCGTGTGCCAGGAATAGGACACAGGATCAAGAATAGGGATAACAAAGATAAGAGAGTTGAGCTGCTACAGAAATTTGCACGCACG CATTTTCCTTCCGTGAAATACATGGAATATGCTGTTGAAGTTGAAACTTACACTCTAACGAAGGCAAACAATCTAGTTCTTAATGTAGATGGTGCAATTG GGTCTCTTTTCTTGGATCTTCTTGCTGGTAGTGGAATGTTCACCAAGCAAGAGATCGATGAAATTGTGGAGATTGGCTATCTAAATGGTCTCTTTGTGCT GGCACGCTCCATTGGTCTGATTGGGCACACTTTTGACCAAAAGAGATTGAAGCAACCACTCTACCGCCACCCATGGGAGGATGTTCTTTACACAAAATGA GATGATTTTGTATGGCTGGAAGAATGTAACCATGCTTCAAGTTAGCAATCTTTTGGAAAATCTTGTGTGGAATCATTATTTTTAGCTGTTAGATAGTGTT GTGTGGCAACCTTCTTCCGTTATTAAGTTGTATTAATCTTCTTAAAGAAAGAACTCTTAGTCAATGTAACAAATATTTCTCGTGATTCCGATCTCTGTTC TCTGTTGTGGCGTCAAAGGAGAGATCACTGAGCTGAAAGTTTTTCATTCCGGAATATTGAATAATAAAATAAAGACTTAATTGAGTCCATAAAAGTTGAC AGTGTTTTGGTTTTACCTCCTATGTTATTTTTCTTTATCAGGACCATTGCTTAAATGTTTATTTTCTTTGTTTTGATAATTGCCATTAGACTCCTTCAGT TAATTGCTGATATGGCAAGATGGAATGTTGCCGGAGGCGGAGACGGTGGAAAAGGTGGTGGAGGAGGAGCTGGTAGAGTTGGGGGTGTGCATGAAGGTGG AGTAGGGGGAGGAATTCCCAAGAAAGATGTATTATAATCTTATATACTGTGAAAAATATATCGTGTCTGTGTATAAAGTGATATTTCTTCACATTAATAG GTCAAAGAAGAGAGAGGCACAACCGTAAATGGTACTTGCACATGTACCAACATTATTATACTCTTTAACAAGGATCCTCAACATTCAACAACTTGGATTC TATCTAAAGCTATGCATAAATCTGAAGCATCATAGTATAAGCACTTTCATGACAAAGTAGGTATACAAAAGAAAAATAATACATTCTCTTAACAAATCTT TCTACATCCTTTTCTTGAATGTTACAAGTACCGTTTTATCTTTGCAAGTTG
• Tissue: pods
• Gene name: LI_gene_193666;
• Additional information: details;

Expression of Ll_transcript_507553

FPKM

• PAB: 7.8
• PNAB: 133.1
• PS1: 25.6
• PS2: 17.4
• PS3: 21.8
• PW1: 52.2
• PW2: 32.7
• PW3: 39.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_507553

• Blastp: ATP-citrate synthase beta chain protein 1 from Arabidopsis with 91.63% of identity
• Blastx: ATP-citrate synthase beta chain protein 1 from Arabidopsis with 91.67% of identity
• Eggnog: Succinyl-CoA ligase ADP-forming subunit alpha(COG0074)
• Kegg: Link to kegg annotations (AT3G06650)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440155.1)
• Pfam: CoA-ligase (PF00549.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;