Ll_transcript_507554

• Id Trinity: TRINITY_DN52555_c0_g1_i14
• Name Transcript: Ll_transcript_507554
• Sequence: CTTGTTTACTTATATTGTCCCATCAATTTTGTATAGCCAACCACACCCATTGTTGCTGAGAGCTAACTACCACACACACCAACACGTCATTCTCTCACTA TATAAACCCATTCTCTTTCATTTCCATCATTTCCTTTCTAACTCGCTCTTCCCAACTCACTCGAGTTCCTTCTCCGATTCCCCCATTCGACTCAACCAGA TCTGTCTGTTTCTTCCTCATGGCGACCGGACAACTGTTCTCCCGCACTACACAAGCTTTATTTTACAACTACAAGCAACTCCCCATCCAGCGGATGCTTG ATTTTGATTTCCTCTGTGGCAGGGAAACACCATCAGTTGCTGGAATAATCAATCCTGGTTCTGAGGGATTTCAAAAGCTCTTTTTTGGTCAGGAGGAAAT TGCAATCCCAGTTCATGCTAACATTGAAGCAGCTTGTCAGGCACATCCTACTGCTGATGTCTTCATCAATTTTGCATCATTTAGGAGTGCTGCTGCATCT TCCCTGGCTGCTTTGAAGCAACCAACAATCAGAGTTGTTGCTATTATAGCTGAAGGAGTACCCGAGTCAGACACTAAAGAATTGATTGCATATGCCCGGT CAAACAATAAGGTTGTTATTGGCCCAGCCACTGTTGGTGGAATTCAAGCTGGTGCTTTTAAGATTGGTGACACAGCTGGAACAATCGACAATATAATTCA ATGCAAGCTCTACAGGCCTGGATCTGTTGGATTTGTTTCTAAATCTGTATGTTGTTAATTATGTTCATGTATATGTTGCTGTCATCTTTCTCGCATTGAG AATAGAACCCTTTTTGTTTAGTACGTAACTACATACCACCATGAAATTTCTGTTAATGTTTATGTGCTTGTGTTAAGGAGGTGAGGAATGTGTTCAAAAC GTTTGCAAATGTATACATTCTACTAAGGATAATTGGGTATTGAGCATTTGATTAATAAGAACGGATTTTTTTAATGGATAGTTGTTATACTGGAAAGGAG ATTCGGGTCCATTTTTTTGCCCATAATCCTCATCCTGTATTACGAGGAACCTTGCAGACTATCCCCATGGGGGTTATGAAAGGAGCGCCCCAATTGGTAG GGAAAAAACCAGTAACTCCTTGAGAATCGTAGGAGAGATGACTATGAATTGTGTCCTTTTCTTGTATATACTAGTCCATTATGGCTTAGTTCATCTAAAA TCTTGAAAAGTAGTATGGTCTACGGGAAATCTCCCGAATCCTTAATCTTCTTATAAGCTTATTGCATAGGTTCAATATATGAAGATATTGTTCACAGTAA TTTGTCATTTGAGCTTTATTTCTATTGGTATGATATAATGTATACATTGATTGTTCTAATAAGAGAAGACAACCTTTTGAGTTGCAGGGTGGGATGTCCA ATGAATTATACAACACCATTGCCCGTGTAACTGATGGGATTTATGAAGGCATTGCCATTGGAGGAGATGTTTTCCCAGGTTCCACACTTTCTGACCATGT CTTACGGTATAACAACATACCACAGGTCAAAATGATCGTTGTACTTGGGGAACTTGGTGGGCGTGATGAGTATTCATTAGTGGAAGCTCTAAAACAAGGG AAAGTGACAAAACCAGTTGTTGCCTGGGTTAGTGGAACCTGTGCACGACTCTTCAAATCTGAAGTACAATTTGGTCATGCTGGAGCTAAGAGTGGTGGTG AGCTGGAGTCTGCTCAAGCAAAGAACCAGGCACTAAAGGAAGCTGGGGCTGCTGTTCCCACTTCATACGAAGCTTTTGAAGTTTCAATTAAAGAAACATT TGACAAATTGGTTGAAGAAGGGAATATCACATCAGTGAAGGAATTTATTCCTCCACCAATCCCAGAGGACCTTAGCACCGCAATTAAGAGTGGAAAAGTT CGTGCTCCAACTCATATTATATCCACCATTTCTGATGACAGAGGTGAGGAGCCATGTTATGCTGGTGTGCCCATGTCTTCCATTATTGAAAAAGGTTTTG GTGTGGGTGATGTTATCTCTCTTTTGTGGTTTAAACGCAGCCTACCTCGTTACTGTACTCAATTTATTGAGATATGCATCATGCTATGTGCCGACCATGG TCCTTGTGTCTCCGGTGCACACAATACTATTGTCACAGCAAGGGCTGGAAAGGACTTAGTTTCCAGTCTCGTATCAGGTTTGCTTACAATTGGCCCTCGA TTTGGAGGTGCCATTGATGATGCTGCTCGCTACTTCAAGGATGCTCGTGACAGGGTATGGTTAATAGGCTTTTCCAGTGGAGCTGGTTGGAACTACAATT TTAGGGATTGAACTGTTAAAGTGGCCATTTTTTTATAGAAATTAAATTAAATAAGGGAAAATTTTAAAGTTTTGATCTCCATCCCCATCACCATGCACTG CATCTTTTATCCTCCAACTACCTCACTTCAACTCCCCTACAACTCTTTAACATATGGTACTATACTTTGTCTTGTCACAGAGTCTTACACCTTATGAGTT TGTTGAAAGTATGAAGAAGAAGGGCATTCGTGTGCCAGGAATAGGACACAGGTAACTAACTGTTCATTTACTAAGTAATAATTGTGCTGTTTCTGCAGCT TTTACTATTGCTACGAAAGTCTATGTTTTTGCCAATGAGAGTTGGTTCTGTTAGTAGGATAACGTTGTCAACCATAAGGTCTTGGGTTCATTCTTGTCAG TGATATTTTATTGTTGATCACTTGATCATCTATAAGTACTATAGGGCTTTCATTGAAGCTTGTACATTACACTTGCCTCGGAAAGAGGCAACCTCCCCTC CCTAGAAACTTTGTTAAAATAGTTCTAAATATTTGAAGCTTGGTTTTGCTTTGTGTAAAAGGATCAAGAATAGGGATAACAAAGATAAGAGAGTTGAGCT GCTACAGAAATTTGCACGCACGCATTTTCCTTCCGTGAAATACATGGAATATGCTGTTGAAGTTGAAACTTACACTCTAACGAAGGCAAACAATCTAGTT CTTAATGTAGATGGTGCAATTGGGTCTCTTTTCTTGGATCTTCTTGCTGGTAGTGGAATGTTCACCAAGCAAGAGATCGATGAAATTGTGGAGATTGGCT ATCTAAATGGGCTCTTTGTGCTGGCACGTTCCATTGGTTTGATTGGGCACACCTTTGACCAAAAGAGATTGAAGCAACCACTCTATCGCCACCCATGGGA AGATGTTCTCTATACAAAGTGAGAGGGTCTTTTTTATGGCTTCAAGAACATCATCATCATGCTTCAAATTAGCAATCTTGAGTCTGAAATATGCAGAAAT GTTTTTTTATAGCTGTTAGATTAGTGTTGTATGTTCTGGTGACAATCCATTTTTCCATTCTTAAGTTGTATTAAAATTCATGAAGAATTAACTCTGTCAA TTTAAAATTTTACCTACTGATTCCTATCTCTGTTGTGTGGTGCCTTCAAAGGGAGAGGTCACTGAGAAAGTTGGTCCAGTTGAGGCTCACAGTTACTAAT ATCCAAAAAATATGATAACTTTGTGGTTAAGCAGATCATTATATTATAATATTTATTATCAGTCTAAAAATTTATACTATACTATTACATCGGATGAATG ATAATTAAATTATACAGTGTCAATATATACTTTTTTTTTCCTCTTACATTAAAGCCCAATTCGAATATATAATGTCCTGACG
• Tissue: pods
• Gene name: LI_gene_193666;
• Additional information: details;

Expression of Ll_transcript_507554

FPKM

• PAB: 0.8
• PNAB: 14.5
• PS1: 2.7
• PS2: 0.6
• PS3: 2
• PW1: 3
• PW2: 3.4
• PW3: 4.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_507554

• Blastp: ATP-citrate synthase beta chain protein 1 from Arabidopsis with 90.94% of identity
• Blastx: ATP-citrate synthase beta chain protein 1 from Arabidopsis with 91% of identity
• Eggnog: Succinyl-CoA ligase ADP-forming subunit alpha(COG0074)
• Kegg: Link to kegg annotations (AT3G06650)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440155.1)
• Pfam: CoA-ligase (PF00549.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;