Id Trinity | TRINITY_DN52555_c0_g1_i22 |
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Name Transcript | Ll_transcript_507564 |
Sequence | GGTTTCTTCGTCATGGCGACTGGACAACTGTTTTCCCGCACTACACAAGCTTTATTTTACAACTACAAGGAATTTCCGATCCAGCGAATGCTTGATTTTG ACTTCCTTTGCGGTAGGGAAACACCATCAGTTGCTGGAATAATCAGTCCTGGTTCTGAGGGATATCAAAAGCTCTTTTTTGGTCAGGGGGAAATTGCAAT CCCAGTTCATGCTAACATTGAAGCAGCTTGTCAGGCACATCCTACTGCTGATGTCTTCATCAATTTTGCATCATATAGGAGTGCTGCTGCATCATCCATG GCTGCTTTGAAGCAGCCAACAATTAGAGTTGTTGCTATTATTGCGGAAGGAGTACCCGAGTCAGACACTAAGCAATTGATTGCATATGCCCGGTCAAACA GTAAGGGTGGGATGTCTAATGAATTGTACAACACCATTGCCTGTGTAACTGATGGGATTTATGAAGGTATTGCCATTGGAGGAGATGTTTTCCCAGGTTC CACACTTTCTGACCATGTTTTACGGTTTAACAGCATACCACAGGTTAAAATGATAGTAGTGCTTGGGGAACTTGGTGGGCGGGATGAGTATTCCTTAGTG GAAGCACTAAAACAAGGAAAGGTGGCAAAGCCAGTTGTTGCCTGGGTTAGTGGAACCTGTGCACGACTCTTCAAATCTGAAGTACAATTTGGTCATGCTG AGCTAAGAGTGGTGGTGAGTTGGAGTCTGCTCAAGCCAAGAATCAGGCACTAAAGGACGCTGGAGCTGCCGTTCCCACTTCATATGAAGCTCTTGAAGCT GCAATTAAAGAAACATTTGACAAAGTGGTTGAAGAAGGGAATATCGCATCAGTGAAGGAATTTACTCCTCCACCGATCCCTGAGGACCTTAGTTTTGCGA TTAAGAGTGGAAAAGTTCGTGCTCCAACTCATATTATATCCACCATTTCTGATGACAGAGGTATTTTGGGATACACTGAGTTGTAATGTAGACATGGGTG TCTTTCTTTGTGACTTTGCTCTAAAATTTGATAGTTAAACTGAAGTTTTCTTCTAATATTTTTCGAAGGTGAGG BLAST |
Tissue | pods |
Gene name | LI_gene_193666; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_507564
Blastp | ATP-citrate synthase beta chain protein 1 from Oryza sativa with 75.18% of identity |
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Blastx | ATP-citrate synthase beta chain protein 1 from Oryza sativa with 75.18% of identity |
Eggnog | Succinyl-CoA ligase ADP-forming subunit alpha(COG0074) |
Kegg | Link to kegg annotations (4325777) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425314.1) |
Pfam | CoA-ligase (PF00549.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |