Ll_transcript_507059

• Id Trinity: TRINITY_DN52557_c1_g1_i11
• Name Transcript: Ll_transcript_507059
• Sequence: AATGCAATCTCCTCAACAGCTGCAGCCAATGTCATTTCTTGCAATTGATGTCTATGCAAAGCTTGTCTTCTCAATCTTGAAGGGATCAAGCAAACTCACT CTTCTTTCCAAGATTCTGGCAGTGACTGTGAGATTCATTCTAAAGGATGTGGAGGAGAGGAAGACGTCTTTTAATCCAAGGCCATATTTCAGATTGTTCA TTAACTGGCTTCTAGATCTTGGTTCACTTGAGCCTGTTACTGATGGTGCAAATCTCCAGATTTTGACCGCTTTTGCCAACGCATTTCATGCTTTGCAGCC CCTCAAAGTCCCTGGATTCAGTTTTGCATGGCTTGAGTTGATAAGTCACAGGAGCTTCATGCCAAAAATGCTGACCGGTAATGCTCAAAAAGGATGGCCA TATATACAAAGGTTGCTTGTGGATCTTTTCCAATTTATGGAACCTTTTCTGAGGCATGCTGAACTTGGAGACTCTGTTAGACTTCTCTATAAAGGCACAC TTAGGGTGCTCTTGGTGCTACTCCATGACTTCCCAGAGTTCCTATGTGACTATCACTTTACCTTTTGTGATGTTATTCCTCCGAGTTGCATACAGATGCG AAATATCATTCTAAGTGCTTTTCCGCGTAGTATGCGTCTGCCAGATCCATCCACTCCCAATTTGAAGATTGATTTGCTTCAAGAAATAACTCAATCACCT CGCATTCTTTCCGAGGTTGATGCTGTGCTTAAAGCAAAGCTGATGAAGGCTGATGTAGATGAATACCTTAAGTCAAGGCAGCAGAATTCGTCATTTTTGT CTGAACTGAAGGAGAAGCTACTCCTCTCACCCAATGAAGCTGGCTCTGCTGGAACTCGTTACAATGTGCCTTTGATCAACTCACTTGTGCTGTATGTTGG AATGCAGGCCATCCAACAACTGCAAGGTCGAACTCCCCATGCACAATCATCAGCAAATGCTTTCCCATTGGCTGTGTTTTCTGTCGGCGCTGCATTGGAT ATTTTCCAGACACTGATTATGGACTTGGACACCGAAGGCCGCTACCTTTTCTTAAATGCCGTTGCCAATCAACTTCGCTACCCAAATACGCATACACACT ACTTTTCCTTCATCCTTCTGTACTTGTTTGCAGAATCAAACCAGGAAATTATCCAAGAACAAATTACAAGAGTGTTGTTAGAGCGGCTAATTGTGAATAG ACCTCATCCATGGGGCCTCCTCATTACATTCATTGAGCTCATCAAGAATCCTAGGTACAATCTTTGGAACCGGACATTCATACGATGCGCACCGGAGATT GAAAAACTTTTTGAATCAGTCTCAAGATCCTGTGGTGGTCCTAAACCAGTGGAAGAGAGTATGGTCCCTGGTTGGGTCTAACTGTCCACTGTTTTCTGTT TGTTAGTTGTTTAGGATTTAGGAATGGAACTATTTGCAGACTTATGTTTTATCCAACATCTTTTGCTGTTTGTAGATTGCATACTGTCCTTATTTTCCTT ACAATTTAAATCTTTCTTAGTTGTAACCATTTTATATGTTATCCGAACATCTGTAATTTCAATGATTTGAATCAGTGATATATTTAAACTATTGAATTTT CAATGAATGAATTGATGTAATATTATTCTGTAGGCACAACTCCACCAACTCAATCTCAGAATGATCTTCTTCTCAAATCCCTTTCTTCATTGAACAATCT ATTCTCAGTTACGGAGCTGAAATGTCTGTTACGGAGTTGAAGGAGCGTCACTTAGCTGCAACGGAAACCGTCAACGAACTCAAGAATCGCTTAAAGCATA GGCGCCATTCTCTGCTTGACACTGATATTGCTGGGTATGCGAGATCTCAGGGTACAGGTCCTGTGAGTTTTGGACCAACTGATCTTGTTTGTTGTAGAAC TTTGCAGGGTCATACAGGAAAGGTGTATTCATTGGATTGGACTTCTGAAAGGAATAGGATTGTGAGTGCATCCCAAGATGGCCGGCTAATAGTGTGGAAT GCTCTAACAAGGCAGAAAATTCATGCTGTAAGGCTGCCTTGTGCATGGGTCATGACATGTGCCTTCTCACCCACTGGTCAATCTGTTGCATGTGGCGGTC TTGATAGTGTTTGCTCTATTTTCAATCTGAATTCTTCCACTGACAAGGATGGGAATCTACCTGTTTCCCGGATGCTTAGTGGACATAAGGGTTATGTGTC CTCTTGTCAGTATGTTCCAGACGAAGAATCTCATTTAATTACTGGTTCTGGTGATCAGACATGTGTTTTATGGGATGTAACTACTGGCCTTAAAACATCT GTCTTTGGTGGTGAGTTTCAGTCTGGACACACTGCAGATGTACTTAGCATCTCCATTAATGGATCCAACTCAAGAATGTTTGCATCTGGTTCCTGTGATT CAACTGCTCGATTGTGGGATACTCGTGTGGCAAGTAGAGCCGTGCGGACATTTCATGGCCACGAGGGAGATGTTAATGCAGTAAAATTCTTTCCAGATGG AAATAGATTTGGAACTGGCGGTGATGATGGAACGTGCAGATTGTTTGACATTAGGACTGGACACCAACTTCAAGTATATTATCAGCAGCACAGTGACAAT GACATCCCGCCTGTGACCTCAATTGCGTTCTCTGTATCTGGAAGACTTCTTTTTGCTGGATACACAAATGGAGATTGCTATGTGTGGGACACCTTATTGG CAAAGGTGGTCTTGAATTTGGGATCTCTCCAAGATTCTCATGACAGCAGGATCAGCTGTTTAGGTTTGTCAGCTGATGGAAGTGCCTTGTGTACAGGAAG CTGGGACACAAACTTAAAGATATGGGCATTTGGAGGGCATAGGAGGTAGTTTGAGCAACATACAAACAGCATTTGCAGGGCATTGTGGTTCATCATGATT CAGTACTGATGTTCAAATTGGAGATAATTGCATGAAATGCAAAGATTATATAGCCTTTTGCATTGGAACTGGTGCGGTAGTTTGTTTTTCCCTTGTACTA AGTACTAGCCACTTTGACAACCTTAAACCAGAAATGAAGGGCTGCTTATTTTCTTGTCTCATCAATGTCTAGCACAAAATACCAATCCTTTTATTTAACT GTTAATATGTCATTATTTTTATCATAAAAAAGAAGTTAATGTGTTATTGGGGTGTCAACAAAAT
• Tissue: pods
• Gene name: LI_gene_193678;
• Additional information: details;

Expression of Ll_transcript_507059

FPKM

• PAB: 6.7
• PNAB: 13.2
• PS1: 11
• PS2: 15
• PS3: 18.4
• PW1: 10.6
• PW2: 10.4
• PW3: 9.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_507059

• Blastp: CCR4-NOT transcription complex subunit 1 from Silurana with 56.28% of identity
• Blastx: Guanine nucleotide-binding protein subunit beta-2 from Nicotiana with 84.76% of identity
• Eggnog: Ccr4-NOT transcription complex, subunit(COG5103)
• Kegg: Link to kegg annotations (100036630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435205.1)
• Pfam: CCR4-Not complex component, Not1 (PF04054.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;