| Id Trinity | TRINITY_DN52557_c1_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_507064 |
| Sequence | AATGCAATCTCCTCAACAGCTGCAGCCAATGTCATTTCTTGCAATTGATGTCTATGCGAAGCTTGTCTTCTCAATCTTGAAGGGATCAAGCAAACTCTTT CTTCTTTCCAAGATTCTGTCAGTGACTGTTAGATTCATTCTAAAGGATGTGGACGAGAGGAAGATGTCTTTTAATCCAAGACCATATTTCAGATTGTTCA TTAACTGGCTTCTAGATCTTGGTTCACTTGAGCCTGTTACTGATGGTTCAAATCTCCAGATTTTGACTGCTTTTGCCAATGCATTTCATGCTTTGCAGCC CCTCAAAGTCCCTGGATTCAGTTTTGCCTGGCTTGAGTTGATAAGTCACAGGAGCTTCATGCCAAAAATGTTGACTGGTAATGGTCAAAAAGGTTGGCCA TATGTCCAACGGTTGCTTGTGGATCTGTTCCAATTTATGGAACCTTTTCTGAGACATGCTGAACTTGGGGACTCTGTTCGACTCCTCTATAAAGGCACAC TTAGGGTGCTCTTGGTGCTACTCCATGACTTCCCAGAGTTCCTATGTGACTATCACTTTACCTTCTGTGATGTTATTCCTCCAAGCTGCATACAGATGCG AAATATCATTCTAAGTGCTTTTCCGCGTAGTATGCGTCTGCCAGATCCATCCACTCCCAATTTGAAGATTGATTTGCTTCAAGAAATAACTCAATCACCT CGCATTCTTTCTGAGGTTGATGCTGCACTTAAAGCAAAGCAGATGAAGGCTGATGTAGATGAATACCTTAAGACAAGGCAGCAGAATTCTCCATTTTTGT CTGAACTGAAGGAGAAGCTACTGCTCTCACCAAGTGAAGCTGCCTCTGCTGGGACTCGTTACAATGTGCCTCTGATCAACTCTCTTGTGCTGTATGTTGG AATGCAGGCAATCCAGCAACTGCAGGGCCGAACTCCCCATGCACAATCAGCAGCAAATGCTTTCCCATTGGCTGTATTTTCTGTCGGCGCTGCATTAGAT ATTTTCCAGACACTGATTATGGACTTGGACACCGAAGGGCGCTACCTTTTCCTAAATGCAGTTGGCAACCAACTTCGTTACCCAAATACACATACACACT ACTTTTCCTTCATCCTTCTGTACTTGTTTGCAGAATCAAACCAGGAAATAATCCAAGAACAGATTACAAGAGTGTTGTTAGAGCGACTAATTGTGAATAG ACCTCATCCATGGGGCCTCCTCATTACTTTCATTGAGCTTATCAAGAATCCTAGGTACAATTTCTGGAATAGGAGTTTCATAAGATGTGCTCCTGAGATT GAAAAACTGTTTGAATCAGTGTCAAGATCATGTGGTGGTCCTAAACCAGTTGATGAGAGTATGGTCTCTGGTTGGGTCTAACTTTGTTGTTTCTTCTTGA ATGAATGAATAGCTTCTTATTTTCCATACACATTCTAAACCTCTAAACCTCTCTGCTGCTCTTGCAACTATTGAGTAATGGATTTGTAATGTAATGATCA CAACAACATCTATATTTTACATTTTTATGGTTGCTACATTATTTTCAAACAAAGTTGCCACTATCATTGCAATGTTTAATGTCTAACTAACACATTGTCA ACAATAATATTTGCAATCAAACTATTGCCTAAACTAATGCCTTTCTCTTTAGCCACTCACCATTAAACACAATCAATAAAGCCAAACACATGTGACACAA CGTGTAGTTGTTCACAATGTGACAACAGACTTAAAAAAGTAAAGATTGATATCTATGATGGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_193678; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_507064
| Blastp | CCR4-NOT transcription complex subunit 1 from Silurana with 56.03% of identity |
|---|---|
| Blastx | CCR4-NOT transcription complex subunit 1 from Silurana with 58.75% of identity |
| Eggnog | Ccr4-NOT transcription complex, subunit(COG5103) |
| Kegg | Link to kegg annotations (100036630) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463583.1) |
| Pfam | CCR4-Not complex component, Not1 (PF04054.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |