Ll_transcript_507065

Id TrinityTRINITY_DN52557_c1_g1_i15
Name TranscriptLl_transcript_507065
SequenceAATGCAATCTCCTCAACAGCTGCAGCCAATGTCATTTCTTGCAATTGATGTCTATGCAAAGCTTGTCTTCTCAATCTTGAAGGGATCAAGCAAACTCACT CTTCTTTCCAAGATTCTGGCAGTGACTGTGAGATTCATTCTAAAGGATGTGGAGGAGAGGAAGACGTCTTTTAATCCAAGGCCATATTTCAGATTGTTCA TTAACTGGCTTCTAGATCTTGGTTCACTTGAGCCTGTTACTGATGGTGCAAATCTCCAGATTTTGACCGCTTTTGCCAACGCATTTCATGCTTTGCAGCC CCTCAAAGTCCCTGGATTCAGTTTTGCATGGCTTGAGTTGATAAGTCACAGGAGCTTCATGCCAAAAATGCTGACCGGTAATGCTCAAAAAGGATGGCCA TATATACAAAGGTTGCTTGTGGATCTTTTCCAATTTATGGAACCTTTTCTGAGGCATGCTGAACTTGGAGACTCTGTTAGACTTCTCTATAAAGGCACAC TTAGGGTGCTCTTGGTGCTACTCCATGACTTCCCAGAGTTCCTATGTGACTATCACTTTACCTTTTGTGATGTTATTCCTCCGAGTTGCATACAGATGCG AAATATCATTCTAAGTGCTTTTCCGCGTAGTATGCGTCTGCCAGATCCATCCACTCCCAATTTGAAGATTGATTTGCTTCAAGAAATAACTCAATCACCT CGCATTCTTTCCGAGGTTGATGCTGTGCTTAAAGCAAAGCTGATGAAGGCTGATGTAGATGAATACCTTAAGTCAAGGCAGCAGAATTCGTCATTTTTGT CTGAACTGAAGGAGAAGCTACTCCTCTCACCCAATGAAGCTGGCTCTGCTGGAACTCGTTACAATGTGCCTTTGATCAACTCACTTGTGCTGTATGTTGG AATGCAGGCCATCCAACAACTGCAAGGTCGAACTCCCCATGCACAATCATCAGCAAATGCTTTCCCATTGGCTGTGTTTTCTGTCGGCGCTGCATTGGAT ATTTTCCAGACACTGATTATGGACTTGGACACCGAAGGCCGCTACCTTTTCTTAAATGCCGTTGCCAATCAACTTCGCTACCCAAATACGCATACACACT ACTTTTCCTTCATCCTTCTGTACTTGTTTGCAGAATCAAACCAGGAAATTATCCAAGAACAAATTACAAGAGTGTTGTTAGAGCGGCTAATTGTGAATAG ACCTCATCCATGGGGCCTCCTCATTACATTCATTGAGCTCATCAAGAATCCTAGGTACAATCTTTGGAACCGGACATTCATACGATGCGCACCGGAGATT GAAAAACTTTTTGAATCAGTCTCAAGATCCTGTGGTGGTCCTAAACCAGTGGAAGAGAGTATGGTCCCTGGTTGGGTCTAACTGTCCACTGTTTTCTGTT TGTTAGTTGTTTAGGATTTAGGAATGGAACTATTTGCAGACTTATGTTTTATCCAACATCTTTTGCTGTTTGTAGATTGCATACTGTCCTTATTTTCCTT ACAATTTAAATCTTTCTTAGTTGTAACCATTTTATATGTTATCCGAACATCTGTAATTTCAATGATTTGAATCAGTGATATATTTAAACTATTGAATTTT CAATGAATGAATTGATGTAATATTATTCTGTAGGCACAACTCCACCAACTCAATCTCAGAATGATCTTCTTCTCAAATCCCTTTCTTCATTGAACAATCT ATTCTCAGTTACGGAGCTGAAATGTCTGTTACGGAGTTGAAGGAGCGTCACTTAGCTGCAACGGAAACCGTCAACGAACTCAAGAATCGCTTAAAGCATA GGCGCCATTCTCTGCTTGACACTGATAGTTAAAGAAATTTAATCACTTTTCATCGTTTTTGAAATTTGGTAATAAATAATTGTTAATAACTTAGTTTTTT GTTGCAGTTGCTGGGTATGCGAGATCTCAGGGTACAGGTCCTGTGAGTTTTGGACCAACTGATCTTGTTTGTTGTAGAACTTTGCAGGGTCATACAGGAA AGGTGTATTCATTGGATTGGACTTCTGAAAGGAATAGGATTGTGAGTGCATCCCAAGATGGCCGGCTAATAGTGTGGAATGCTCTAACAAGGCAGAAAAT TCATGCTGTAAGGCTGCCTTGTGCATGGGTCATGACATGTGCCTTCTCACCCACTGGTCAATCTGTTGCATGTGGCGGTCTTGATAGTGTTTGCTCTATT TTCAATCTGAATTCTTCCACTGACAAGGATGGGAATCTACCTGTTTCCCGGATGCTTAGTGGACATAAGGGTTATGTGTCCTCTTGTCAGTATGTTCCAG ACGAAGAATCTCATTTAATTACTGGTTCTGGTGATCAGACATGTGTTTTATGGGATGTAACTACTGGCCTTAAAACATCTGTCTTTGGTGGTGAGTTTCA GTCTGGACACACTGCAGATGTACTTAGCATCTCCATTAATGGATCCAACTCAAGAATGTTTGCATCTGGTTCCTGTGATTCAACTGCTCGATTGTGGGAT ACTCGTGTGGCAAGTAGAGCCGTGCGGACATTTCATGGCCACGAGGGAGATGTTAATGCAGTAAAATTCTTTCCAGATGGAAATAGATTTGGAACTGGCG GTGATGATGGAACGTGCAGATTGTTTGACATTAGGACTGGACACCAACTTCAAGTATATTATCAGCAGCACAGTGACAATGACATCCCGCCTGTGACCTC AATTGCGTTCTCTGTATCTGGAAGACTTCTTTTTGCTGGATACACAAATGGAGATTGCTATGTGTGGGACACCTTATTGGCAAAGGTGGTCTTGAATTTG GGATCTCTCCAAGATTCTCATGACAGCAGGATCAGCTGTTTAGGTTTGTCAGCTGATGGAAGTGCCTTGTGTACAGGAAGCTGGGACACAAACTTAAAGA TATGGGCATTTGGAGGGCATAGGAGGTAGTTTGAGCAACATACAAACAGCATTTGCAGGGCATTGTGGTTCATCATGATTCAGTACTGATGTTCAAATTG GAGATAATTGCATGAAATGCAAAGATTATATAGCCTTTTGCATTGGAACTGGTGCGGTAGTTTGTTTTTCCCTTGTACTAAGTACTAGCCACTTTGACAA CCTTAAACCAGAAATGAAGGGCTGCTTATTTTCTTGTCTCATCAATGTCTAGCACAAAATACCAATCCTTTTATTTAACTGTTAATATGTCATTATTTTT ATCATAAAAAAGAAGTTAATGTGTTATTGGGGTGTCAACAAAAT BLAST
Tissuepods
Gene nameLI_gene_193678; 
Additional informationdetails; 

Expression of Ll_transcript_507065

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_507065
BlastpCCR4-NOT transcription complex subunit 1 from Silurana with 56.28% of identity
BlastxGuanine nucleotide-binding protein subunit beta-2 from Nicotiana with 86.73% of identity
EggnogCcr4-NOT transcription complex, subunit(COG5103)
KeggLink to kegg annotations (100036630)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019435205.1)
PfamCCR4-Not complex component, Not1 (PF04054.14)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;