Ll_transcript_507066

Id TrinityTRINITY_DN52557_c1_g1_i16
Name TranscriptLl_transcript_507066
SequenceAATGCAATCTCCTCAACAGCTGCAGCCAATGTCATTTCTTGCAATTGATGTCTATGCAAAGCTTGTCTTCTCAATCTTGAAGGGATCAAGCAAACTCACT CTTCTTTCCAAGATTCTGGCAGTGACTGTGAGATTCATTCTAAAGGATGTGGAGGAGAGGAAGACGTCTTTTAATCCAAGGCCATATTTCAGATTGTTCA TTAACTGGCTTCTAGATCTTGGTTCACTTGAGCCTGTTACTGATGGTGCAAATCTCCAGATTTTGACCGCTTTTGCCAACGCATTTCATGCTTTGCAGCC CCTCAAAGTCCCTGGATTCAGTTTTGCATGGCTTGAGTTGATAAGTCACAGGAGCTTCATGCCAAAAATGCTGACCGGTAATGCTCAAAAAGGATGGCCA TATATACAAAGGTTGCTTGTGGATCTTTTCCAATTTATGGAACCTTTTCTGAGGCATGCTGAACTTGGAGACTCTGTTAGACTTCTCTATAAAGGCACAC TTAGGGTGCTCTTGGTGCTACTCCATGACTTCCCAGAGTTCCTATGTGACTATCACTTTACCTTTTGTGATGTTATTCCTCCGAGTTGCATACAGATGCG AAATATCATTCTAAGTGCTTTTCCGCGTAGTATGCGTCTGCCAGATCCATCCACTCCCAATTTGAAGATTGATTTGCTTCAAGAAATAACTCAATCACCT CGCATTCTTTCCGAGGTTGATGCTGTGCTTAAAGCAAAGCTGATGAAGGCTGATGTAGATGAATACCTTAAGTCAAGGCAGCAGAATTCGTCATTTTTGT CTGAACTGAAGGAGAAGCTACTCCTCTCACCCAATGAAGCTGGCTCTGCTGGAACTCGTTACAATGTGCCTTTGATCAACTCACTTGTGCTGTATGTTGG AATGCAGGTACCGTAAAGTTGAAACTTAAAGTTGCTATTTTTTTACCGAAGTATGTTAATTGTGGACCATTAAGAACATAATTCTGTCATCTTCATTTTC AACTTTAGACTTTTTTTAAGTGATCTAAATAACAACTTTTTTTTAAGACCGGAGGTTGCGCACGGATATGATATTGTTAAACACAACACAGGGACATGGC TTCTACCGGTAATGAGTAACTTTGAAATGACTTTATTTTTGAGTTATTTACATACAGGCCATCCAACAACTGCAAGGTCGAACTCCCCATGCACAATCAT CAGCAAATGCTTTCCCATTGGCTGTGTTTTCTGTCGGCGCTGCATTGGATATTTTCCAGACACTGATTATGGACTTGGACACCGAAGGCCGCTACCTTTT CTTAAATGCCGTTGCCAATCAACTTCGCTACCCAAATACGCATACACACTACTTTTCCTTCATCCTTCTGTACTTGTTTGCAGAATCAAACCAGGAAATT ATCCAAGAACAAATTACAAGAGTGTTGTTAGAGCGGCTAATTGTGAATAGACCTCATCCATGGGGCCTCCTCATTACATTCATTGAGCTCATCAAGAATC CTAGGTACAATCTTTGGAACCGGACATTCATACGATGCGCACCGGAGATTGAAAAACTTTTTGAATCAGTCTCAAGATCCTGTGGTGGTCCTAAACCAGT GGAAGAGAGTATGGTCCCTGGTTGGGTCTAACTGTCCACTGTTTTCTGTTTGTTAGTTGTTTAGGATTTAGGAATGGAACTATTTGCAGACTTATGTTTT ATCCAACATCTTTTGCTGTTTGTAGATTGCATACTGTCCTTATTTTCCTTACAATTTAAATCTTTCTTAGTTGTAACCATTTTATATGTTATCCGAACAT CTGTAATTTCAATGATTTGAATCAGTGATATATTTAAACTATTGAATTTTCAATGAATGAATTGATGTAATATTATTCTGTAGGCACAACTCCACCAACT CAATCTCAGAATGATCTTCTTCTCAAATCCCTTTCTTCATTGAACAATCTATTCTCAGTTACGGAGCTGAAATGTCTGTTACGGAGTTGAAGGAGCGTCA CTTAGCTGCAACGGAAACCGTCAACGAACTCAAGAATCGCTTAAAGCATAGGCGCCATTCTCTGCTTGACACTGATAGTTAAAGAAATTTAATCACTTTT CATCGTTTTTGAAATTTGGTAATAAATAATTGTTAATAACTTAGTTTTTTGTTGCAGTTGCTGGGTATGCGAGATCTCAGGGTACAGGTCCTGTGAGTTT TGGACCAACTGATCTTGTTTGTTGTAGAACTTTGCAGGGTCATACAGGAAAGGTGTATTCATTGGATTGGACTTCTGAAAGGAATAGGATTGTGAGTGCA TCCCAAGATGGCCGGCTAATAGTGTGGAATGCTCTAACAAGGCAGAAAATTCATGCTGTAAGGCTGCCTTGTGCATGGGTCATGACATGTGCCTTCTCAC CCACTGGTCAATCTGTTGCATGTGGCGGTCTTGATAGTGTTTGCTCTATTTTCAATCTGAATTCTTCCACTGACAAGGATGGGAATCTACCTGTTTCCCG GATGCTTAGTGGACATAAGGGTTATGTGTCCTCTTGTCAGTATGTTCCAGACGAAGAATCTCATTTAATTACTGGTTCTGGTGATCAGACATGTGTTTTA TGGGATGTAACTACTGGCCTTAAAACATCTGTCTTTGGTGGTGAGTTTCAGTCTGGACACACTGCAGATGTACTTAGCATCTCCATTAATGGATCCAACT CAAGAATGTTTGCATCTGGTTCCTGTGATTCAACTGCTCGATTGTGGGATACTCGTGTGGCAAGTAGAGCCGTGCGGACATTTCATGGCCACGAGGGAGA TGTTAATGCAGTAAAATTCTTTCCAGATGGAAATAGATTTGGAACTGGCGGTGATGATGGAACGTGCAGATTGTTTGACATTAGGACTGGACACCAACTT CAAGTATATTATCAGCAGCACAGTGACAATGACATCCCGCCTGTGACCTCAATTGCGTTCTCTGTATCTGGAAGACTTCTTTTTGCTGGATACACAAATG GAGATTGCTATGTGTGGGACACCTTATTGGCAAAGGTGGTCTTGAATTTGGGATCTCTCCAAGATTCTCATGACAGCAGGATCAGCTGTTTAGGTTTGTC AGCTGATGGAAGTGCCTTGTGTACAGGAAGCTGGGACACAAACTTAAAGATATGGGCATTTGGAGGGCATAGGAGGTAGTTTGAGCAACATACAAACAGC ATTTGCAGGGCATTGTGGTTCATCATGATTCAGTACTGATGTTCAAATTGGAGATAATTGCATGAAATGCAAAGATTATATAGCCTTTTGCATTGGAACT GGTGCGGTAGTTTGTTTTTCCCTTGTACTAAGTACTAGCCACTTTGACAACCTTAAACCAGAAATGAAGGGCTGCTTATTTTCTTGTCTCATCAATGTCT AGCACAAAATACCAATCCTTTTATTTAACTGTTAATATGTCATTATTTTTATCATAAAAAAGAAGTTAATGTGTTATTGGGGTGTCAACAAAAT BLAST
Tissuepods
Gene nameLI_gene_193678; 
Additional informationdetails; 

Expression of Ll_transcript_507066

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_507066
BlastpCCR4-NOT transcription complex subunit 1 from Silurana with 52.43% of identity
BlastxGuanine nucleotide-binding protein subunit beta-2 from Nicotiana with 86.73% of identity
EggnogCcr4-NOT transcription complex, subunit(COG5103)
KeggLink to kegg annotations (100036630)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019448507.1)
PfamCCR4-Not complex component, Not1 (PF04054.14)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;