Ll_transcript_505525

• Id Trinity: TRINITY_DN52562_c2_g2_i4
• Name Transcript: Ll_transcript_505525
• Sequence: CGTGTGTTTTTGGGTACGGTGATAGTACAGATGGTTGAGCCTTATGGTTTTTTTTTGCTGCTGCTCTAGAGGGGAATCAAGAAAGCATATGAGGAGAGCC AACTGATGCACTGTCTTCTTGGTTTTGTAACTCTTCTGTTACAATCCTCATAAACCAGACCTTATTGCATCAGTTACTCTAAAAAACCTGTTGCTCTACA AATGGGGATCATAACCCATAAAAGTAACCGTAGCGGTTACTACTTAAGTTGAAATAATTCTAATTCAGTCTCGTCATCAAATTAGAAATTGTCTGAAGGT ATCTACACTTATAATATTTTATGACATATATGCCCTTAGCCACCAATTAATTCCTGAAGACCATTTTATACTTGGCTAATTAAATAATGGCCATAACACA ATTATAGAATTATATTTGTGACCCATAAAATGTCAGAAATTCCAACAATCTCCCACTGGTCACATATATAATTCACCGTACGTGTTATCCTTATTGCGCG CTTAAATATTGTCATCACGACTCAGGCATACCCAAATTATCTCGTTCATTAGTCTTGTCTCCATATCGAATCATAGTGAATTTCGCCATATCAATCATGA CTAATTCAACAATGATCACCAACATTGACACAACTAAATAACATAGATTCATCATGAAACGTGTAGCATGAAAATCACATGAATATAGTCTATACATGTT AATTTTCAACTGGTTCTACTTAACTTTAGTGAGATCCTTAATAATAACATAAAACCTTATTGTACAAAGTATAAAGACAGAATACCAAACTGAATGATTA ATCAACTGAAGTTTGAATACAAAGTATTCATACATAATATTGAAATTACATAGAACATAATAAAGGTGTACACATTCTAACTCCCACTAAACCAAAGAAT CCTCACATTGTAGAACACCCATGTGAGCAATATGCTCATTAAAGACCTTGGGTGTGATAGCTTTTGTAAGAGGATCCGCAATCATGGAGTTAGTGTCTAA GTGTTCTATGGAAAGTTGTCCACTTTGTACTTTCTCCTTAACAACTAGGAACTTAATGTCGATGTGTTTCGACTTTGCTGAACTCTTATTGTTATTGGAG AACAACACGACTGACCTATTGTCACAATATAACTTTAGTGGTTTTTCAATTCCTTCCACAATTCGCAGCCCAATGACAAAATTTCTCAGCCATGTTGCCT GATGTGATGCCTCATAACATGCTATATATTCAGCTGTCATGGTGGATGAAGTCACAAGAGTTTGCTTGGCACTACGCCAAGAAACTGCACCACCAACCAA CAAATAGACATAGCCCGAAGTGGATCGTCTACTATCTTGAATCCCACAAAATCGGAGTCAGAATACCCAATGATCTCTAATTGGTCTGATCTCCTATATG TGAGCATATAATCTTTTGTTCCCTTTAAGTACCTCATGACCATTTTGGCTGTTTTCCAATGATCCATTCCTGGATTACTCATATATCTGCCTAAAACCCC AACTATGAACGCTACATTCGAACGCGTAAATACTTGAGCATACATAAGACTCCCTACAGCTGATGCATAAGGGATCTTTTGCATTTCCTGAATTTTCAGA TTTCCTTTAGGGCACTGATTGAGACTAAATTTATCTCCCTTAGCAACTGGAGTATCAATTGGTTTACAATCCTGCATGTCATATCTTTTAAGTACTTTTT CTATATAGCTCTTTTGTGATAATCCAAGAATACCCCAAGATTTGTCTCAGTGTATCTGAATTCCTAATACAAATGAAGCTTCACCAAGATCTTTCAGTTC AAAATTACTAGATAGAAATTTTCTGGTTTCTAACAAGGTACCCACATCATTAGTGGTAAGCAGTATGTCATCCACATACAAGAGCAAGAAAATATACTTG CTCCCACTGAACTTGTGATACACACAATCCTCGACTGAATTCATCTCAAAACCATAAGAGAGAATCACCTCATGAAATTTGTGGTACCACTGACG
• Tissue: pods
• Gene name: LI_gene_193726;
• Additional information: -

Expression of Ll_transcript_505525

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.3
• PS3: 0.1
• PW1: 0.2
• PW2: 0.4
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_505525

• Blastp: Copia protein from Sophophora with 34.51% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 43.38% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_017437985.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;