| Id Trinity | TRINITY_DN52564_c2_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_505687 |
| Sequence | CACAAACTTTGCAGTTTCCACTCTTCACACTCATAAGGATCATGAATCTCCATGAATCAATGATCGATCCCACACTCAACAAGTTTTGATTTTCAACACT CTAACATCTTCAAATACAAACTGGGTTTTTCTTCTCTTCCCCATAGATACCCATTTCATTTGAACACTTGGATGAAAAAACAACAAAGTTAACATTTTTT CAACTCTTTTAGAGAGAGAGAGAAAGAGAAGAAAGACATGGCATTTTCTATTGGCAGCACAAGGCGTGGTGGAGGAAGTTGGAGCCAATCGATCTTACCA TCAACAAACCCAAAATCAAAGGTACCCAGAAAGCAAAGGAAGAGAAAAGTGCTCAAAGATTTCATCTTTTCAAATTTCTACACCATTGGCATTGTTTTCT CACTCTCTTTGTTCATCATCATTCTCTTCAAATTTGGGGTCCCAAAACCCATCACTTCACACTTCAGGGCCCGGTCCAGCCGATACCGAAAGCCGGTTAA CAAAAAGCCGGTTTTTTTGAGTGATGGGAAGGGTGGGAACTACACCCTTTTGGCTGCAAGTGTCGATATTACAACTAAAGGGTTGTATGATAAGATTGAG TTCTTGGATGTGGATGGTGGAGCTTGGAAGCAAGGTTGGAGTGTGAGTTATAGAGGGAATGAGTGGGATAGTGAGAAGCTGAAGGTTTTTGTTGTGCCAC ATTCACATAATGATCCTGGTTGGAAGCTCACTGTGGAGGAATACTATGATAGACAATCTAGGCATATACTTGATACTATTGTTGAAACCCTTCAAAAGGA TCCTCGCCGGAAATTTATATGGGAGGAAATGTCATATCTAGAGAGGTGGTGGCGTGATGCCCCGGATGAGATGAAGGAATCATTCATCAGTTTGGTAAAG AATGGGCAGTTAGAAATTGTTGGAGGTGGCTGGGTGATGAATGATGAGGCCAATTCCCATTATTTTGCTATCATTGAACAGATGGCAGAAGGAAATATGT GGTTGAATGACACCATTGGATTCGTTCCTAAAAACTCTTGGGCCATAGATCCATTTGGTTACTCACCTACCATGGCATATCTGCTGCGTCGTATGGGATT CAATAACATGCTTATCCAGAGGGCTCATTATGAACTCAAGAAAGAACTAGCATGGCATAAGAATTTAGAGTACATATGGCGTCAAAGCTGGGATGCTGAG GAAACAACTGATATATTTGTCCATATGATGCCTTTTTATTCATATGATATACCTCATACGTGTGGCCCGGAGCCTGCTATTTGTTGTCAGTTCGACTTTG CTCGTATGCAGGGTTTTTTATATGAAAGATGCCCGTGGGGACAACATCCTGTGGAGACCAATCAGAAAAATGTTGAGGAGAGGGCACTTAAATTGCTAGA TCAATACAAGAAAAAGTCTACTTTGTACCGAACAAATACTCTTCTTATTCCTCTTGGAGATGATTTTCGCTATGTTAATGTTGAAGAAGCAGAGGCTCAA TTCAGAAATTACCAATTGTTATTTGATTATATCAACTCAAACCCGAGTCTGAATGCAGAGGCAAAGTTTGGTACTTTGGAAGACTACTTTCAAACCCTCC GCGAGGAAGCAGAAAGGATAAATTACACGGCTCCTGGTGAAATAGGATCTGGTCTCGTTGAAGGTTTCCCTTCCCTGTCTGGTGACTTTTTTACTTATGC TGATCGGCAACAAGACTACTGGAGTGGTTATTATGTTTCACGGCCCTTCTTCAAGGCTGTTGATAGGGTACTGGAGCAGACTCTTCGTGCCACGGAAATT ATGGTTGCTCTAATACTTGGTTTATGTCAGAGACCAGATTGCGAGAAGTTTTCGATGCGGTTTTCCTCTAAGTTGACCGCTGCTAGAAGGAACTTAGCTC TTTTTCAGCATCATGATGGTGTAACCGGTACTGCAAAAGATCATGTGGTTATGGACTATGGAACTCGAATGCATACTTCATTACAGGACTTGCAGATTTT TATGTCCAAGGCAGTTGAGCCACTTCTTGGAATCCATTATGAGAAATTAGATGAAAGTCCTTCCCAGTTTGAGCCAGCACTGGTGAGATCTAGATATGAT GCTCAGCCGTTGCATAAAGTGAATAGTATTCGTGAGGGTACTTACCAAACAGCGGTATTTTTTAACCCTTTGGAACAAACTAGGGAAGAAGTTGTGATGG TTGTTGTTGATAGTCCTGACATTACTGTGGTTGATTCTAACTGGAGTTGTGTTCAAAGCCAAATTTCTCCTGAGTTGCAGCATCATAATAGCAAGATCTT TACCGGGAGGCATAGGTTATATTGGGAAGTTTCGGTTCCTGCCATGGGGTTGGAAACATATTATCTTGTCATTGGTTTTGTTGGTTGTGACAAGGCCAGG CCTGCAAAGATGAAAGTTTTCTCCAAATCAAGTTCGGTTAAGTGTCCTACTCCATACGATTGCATTGAAACTCAAGCTGATATGGCTGAAATTGAGAATC GGCATCAAAGACTAACTTTTGATGTAAGGTATGGTTTGTTGCAGAAAATAATCTTGAAAAATAGTTCCCCAAATGTTGTGAATGAGGAAATCGGTATGTA TTCTAGTTCGGGTAGTGGGGCATACTTGTTTAAGCCAAATGGCGATGCCCAGCCTGTTATTGAAGAAGGCGGACAACTGATAATCTCGGAAGGCCCTTTG ATGCAGGAAGTATACTCTTATCCAAAGACAGGTTGGGAGAAAGCCCCCATTTCTCATAGCACACGTTTATATAATGGAGAGAATACGGTTCAAGGGTTTG TCGTTGAAAAGGAATATCATGTTGAGCTTCTTGGCCATGATTTTAATGATAAGGAGTTGATAGTTAGATACAAAACAGATATTGATAGCAAAAAGGTATT TTACTCTGATTTGAACGGATTTCAGATGAGCCGAAGAGAAACTTATGATAAGATTCCTCTGCAAGGCAATTACTATCCTATGCCCTCTCTTGCATTCATA CAAGGATCCAATGGTCGGCGGTTTTCTGTTCATTCCCGGCAATCATTGGGCGTTGCAAGCCTTAAAGATGGATGGCTAGAGATAATGCTTGACCGTCGTT TGGTAAGAGATGATGGTCGTGGTCTCGGCCAAGGAGTGTTGGATAACCGTGTAATGAATGTTGTATTCCATATAACCGTGGAAGCCAATATTTCGACCAT TCCAATTTTGGCTTCCAGCTCTTTCCCTTACAGCCCTTCTCTTTTCTCACACCGTGTCGGCTCTCACTTGAACTATCCATTGCATGCATTCTTTGCAAAG AAGGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_193738; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_505687
| Blastp | Alpha-mannosidase 2 from Arabidopsis with 72.44% of identity |
|---|---|
| Blastx | Alpha-mannosidase 2 from Arabidopsis with 72.44% of identity |
| Eggnog | Mannosidase alpha class(ENOG410XQMZ) |
| Kegg | Link to kegg annotations (AT5G14950) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427730.1) |
| Pfam | Glycosyl hydrolases family 38 N-terminal domain (PF01074.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |