| Id Trinity | TRINITY_DN52570_c0_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_506008 |
| Sequence | AGTGATGATATGGGGTGTATAGAATTTAAAGTCATGTGAAAATGGGAATGCCATGTGATAGTTAGATCTGATGCAGAAAAATGCTATAAATAAGCATTAA ACCATCACTTATCACTTACCTTATTTTCTCCAACAGATAACTGAACTCATCTCATTAAGGTAACTAACCCAAACTCAAATTCTCTCTAAATTTCATTCCC CTCATTAAATTTCACTTTCATTTTCACAACTCTTCATTTTCTCTTCTTTACTTCATTTCTCTCTTAATTTACACTCACTTCAATTTCTCACCACACGAGA TTTATAACCGTCAAATCAACAATGGCGTCTCATATTGTTGGATACCCACGCGTGGGCCCCAAGAGGGAGCTCAAGTTTGCTTTAGAGTCCTTCTGGGATG GAAAGAGCAGTGCCGAGGATTTAAAGAAGGTGTCTGCAGAGCTCAGGGCATCCATCTGGAAGCAGCAGGCTGGTGCTGGGATAAAGTACATCCCTAGCAA CACTTTCTCATACTACGATCAGGTGCTCGATGCCACCGCTACCCTGGGTGCTGTCCCACCTAGATATGGCTGGACCGGCGGTGAGATTGAGTTTGATACC TACTTCTCCATGGCCAGAGGTAATGCCTCTGTGCCTGCCATGGAGATGACCAAGTGGTTCGACACCAACTACCACTTTATCGTCCCTGAATTGGGACCTG ATGTGAACTTCACTTATTCTTCTCATAAGGCTGTTGAAGAATACAAGGAGGCCAAGGCGCTTGGAATTGATACAATTCCTGTCCTCATTGGACCAGTCTC ATATTTGTTGCTCTCCAAGCCTGCCAAGGGTGTTGATCAATCATTTTCTCTCCTCTCTCTCCTCCCAAAGGTCCTTGCTGTCTACAAGGAGGTTGTGGCT GATCTTAAGGCAGCTGGTGCTTCATGGATTCAATTTGATGAACCCACACTTGTCTTGGACCTTGAATCTCACAAGTTGCAAGCATTTACTGATGCATACT CAGAACTTGCATCTACTTTATCTGGTTTGAATGTTCTTATTGAGACCTACTTTGCTGATATCCCTGCCGAAGCATACAAGACCCTCACATCTTTGAGCGG TGTCAGTGCATTCGGATTTGATTTGGTCCGTGGAATTAAGACTCTTGATTTGATCAAGAGTGGATTTCCCACTGGAAAGTACCTCTTTGCTGGAGTGGTT GATGGAAGGAACATTTGGGCTAATGATCTTGCTGCTTCTATCAGTACATTGCAGGCTCTTGAGGGCATTGTTGGCAAAGATAAACTTGTTGTCTCAACCT CCTGCTCACTTCTTCACACTGCTGTTGATCTTGTTAATGAGACCAAGTTGGACGATGAGATCAAGTCATGGTTAGCTTTTGCTGCCCAAAAAGTTGTTGA AGTAAATGCATTGGCTAATGCATTGTCTGGTAACAAAGATGAGGTAATCTCTATTTCTTGCACTTCATCTAACATTTGAAGAAATATGTGAAAATAATTT GATCATGTTGGGTACCTGAAAATAATGTGGCATTGGAATCATGAGAACAAAATGCAGTTTGTTTTCTGCAATTGGAGGTGTTTTGATAGAAATATTAATT TCAAATTTAACACATGTTTTATGTTCTATAACAGTTTGTTTCATTGCATAATTTCCTGAACTGGTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_193777; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_506008
| Blastp | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase from Cryophytum with 85.56% of identity |
|---|---|
| Blastx | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase from Cryophytum with 85.56% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458018.1) |
| Pfam | Cobalamin-independent synthase, N-terminal domain (PF08267.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |