Ll_transcript_506010

• Id Trinity: TRINITY_DN52570_c0_g1_i16
• Name Transcript: Ll_transcript_506010
• Sequence: AGTGATGATATGGGGTGTATAGAATTTAAAGTCATGTGAAAATGGGAATGCCATGTGATAGTTAGATCTGATGCAGAAAAATGCTATAAATAAGCATTAA ACCATCACTTATCACTTACCTTATTTTCTCCAACAGATAACTGAACTCATCTCATTAAGGTAACTAACCCAAACTCAAATTCTCTCTAAATTTCATTCCC CTCATTAAATTTCACTTTCATTTTCACAACTCTTCATTTTCTCTTCTTTACTTCATTTCTCTCTTAATTTACACTCACTTCAATTTCTCACCACACGAGA TTTATAACCGTCAAATCGTAATGTTCACACTTCGTCAATGTTTTAGGTTATAGATCTGTTTTGTTTAGTTACCGTAATGTGTAGATCTATTGGATCTGGA ACTTTTATGCTATGATTTCTTAATTTCGATTATTTATGACACTCAAAATTAAAATTTAATTTTAAATCTGTTAGTTTGTGATATTTCATTGCTCTGAAGC TGTGATTTTCGTATAATTTGCTATTTCTTTTCAAGATAGTAAGTGTTTTTAGTTCTGCTATCTTCTGAGGCATTTTTGGTTTATATTGTTTTTGAGTGAA AACTAATTTGGTCCTTATAAATTTGTACATGTACGATTCTGATCTCCGAAAAAGTAAAAATCCAAATTAGTACTAAGATTAGGATTGTCAGTCAAAATAG TACTCACCAAGAGTCATTAAAAGTAACTAATTTGACCCGCATTTGAAATTTTTTCAGACTATTTTCAATTTTCGAGGGACCAAATTGGTACCTAACCCAA AATAGGTATATACTCATTTTTTAAATGGTTAAAAATGTGTGGCCCAATGCATAAGGATGAAGGATGATTTGAACTCATGACCTTCATAGCTCATAAGGCA AACAACTTGACCGATGCATTGAGGCTTAGTCCTTTTTTTAAATGCCTGCTTATAGAAATTTTGATTACAAGCAGTTTTGAACACGAGAAATAAGCTTATG CGCTGTTGAATATCTTAGAATATGCTTATGTGGTTAGCTTTTCAAATCTAGTTCGTGTTCGGGGTAACTCGATTTGATTATAAGGGACTTTGAACGCTAA ATAGGTGAAAGTGACTAAGTGAGTGTTGATTTGGATTTTAATCTGTTAACAGAACAATGGCGTCTCATATTGTTGGATACCCACGCGTGGGCCCCAAGAG GGAGCTCAAGTTTGCTTTAGAGTCCTTCTGGGATGGAAAGAGCAGTGCCGAGGATTTAAAGAAGGTGTCTGCAGAGCTCAGGGCATCCATCTGGAAGCAG CAGGCTGGTGCTGGGATAAAGTACATCCCTAGCAACACTTTCTCATACTACGATCAGGTGCTCGATGCCACCGCTACCCTGGGTGCTGTCCCACCTAGAT ATGGCTGGACCGGCGGTGAGATTGAGTTTGATACCTACTTCTCCATGGCCAGAGGTAATGCCTCTGTGCCTGCCATGGAGATGACCAAGTGGTTCGACAC CAACTACCACTTTATCGTCCCTGAATTGGGACCTGATGTGAACTTCACTTATTCTTCTCATAAGGCTGTTGAAGAATACAAGGAGGCCAAGGCGCTTGGA ATTGATACAATTCCTGTCCTCATTGGACCAGTCTCATATTTGTTGCTCTCCAAGCCTGCCAAGGGTGTTGATCAATCATTTTCTCTCCTCTCTCTCCTCC CAAAGGTCCTTGCTGTCTACAAGGAGGTTGTGGCTGATCTTAAGGCAGCTGGTGCTTCATGGATTCAATTTGATGAACCCACACTTGTCTTGGACCTTGA ATCTCACAAGTTGCAAGCATTTACTGATGCATACTCAGAACTTGCATCTACTTTATCTGGTTTGAATGTTCTTATTGAGACCTACTTTGCTGATATCCCT GCCGAAGCATACAAGACCCTCACATCTTTGAGCGGTGTCAGTGCATTCGGATTTGATTTGGTCCGTGGAATTAAGACTCTTGATTTGATCAAGAGTGGAT TTCCCACTGGAAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCTAATGATCTTGCTGCTTCTATCAGTACATTGCAGGCTCTTGAGGG CATTGTTGGCAAAGATAAACTTGTTGTCTCAACCTCCTGCTCACTTCTTCACACTGCTGTTGATCTTGTTAATGAGACCAAGTTGGACGATGAGATCAAG TCATGGTTAGCTTTTGCTGCCCAAAAAGTTGTTGAAGTAAATGCTTTGGCTGCTGCTTTGTCTGGTAACAAGGATGAGGCCTTCTTCTCCTCTAATGCTG CAGCTTTGGCTTCAAGAAAGTCCTCTCCAAGAGTGACTAACGAAGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCTGCGCATCGCCGTGCTACTAA TGTCAGTGCCAGACTTGATGCTCAACAAAAGAAGCTTAACCTTCCAATCCTCCCAACCACCACTATTGGATCCTTCCCTCAGACTGTAGAAGTGAGGAGG GTACGCCGTGAATACAAGGCTAAAAAGATCTCTGAGGAAGAGTATGTTACAGCAATTACTGAGGAGATCCGCAAAGTTGTTGAACTCCAAGAAGAGCTTG ATATTGATGTCTTGGTGCATGGGGAGCCTGAGAGAAACGATATGGTTGAGTACTTTGGTGAGCAATTGTCAGGCTTTGCCTTCACTGTTAATGGGTGGGT GCAATCCTATGGATCTCGTTGTGTGAAGCCACCAATCATCTATGGTGATGTGAGCCGCCCAAAGGCAATGACTGTCTTCTGGTCATCTAAAGCTCAGAGC TTGACCAAACGCCCAATGAAGGGAATGCTTACTGGCCCTGTCACCATCCTCAATTGGTCTTTCGTCAGAAACGATCAGCCTAGATCTGAGACCTGCTACC AGATTGCTTTGGCTATCAAGGATGAAGTCGAAGACCTTGAAAAGGCCGGCATCAATGTTATCCAAATTGATGAGGCTGCTTTGAGAGAGGGACTACCATT GAGGAAGTCAGAGCATGCTCATTACTTGGACTGGTCTGTTCATTCTTTCAGAATCACTAATGTTGGTGTTCAGGATACCACTCAGATCCACACCCACATG TGCTACTCAAACTTCAACGACATCATCCACTCAATCATTGATATGGATGCTGATGTTATCACCATCGAGAACTCCCGTTCTGATGAAAAGCTCCTTTCAG TTTTCCGTGAAGGAGTGAAGTATGGTGCTGGAATTGGCCCTGGTGTCTATGACATCCACTCCCCAAGAATACCACCAACCGAAGAAATTGCTGACAGGAT TAACAAGATGCTTGCTGTGCTTGAGAAGAACATCTTGTGGGTCAACCCCGACTGTGGTCTCAAGACCCGCAAGTACTCAGAGGTGAAGCCGGCCCTTACC AACGTGGTTGCCGCAGCCAAACTCATCCGTAACGAGCTTGCCAAGTGAAATGATACAAGATGTTCTGAGTCTCAGTAGTCGATTGATTCTGCTTGATTTA CACAGAAGGGAAATTTTCTATTTGGTTGTTTCAATAACTGTGTGAAATATTATATCTAGTTGTTTAGTATGCTCTATGAGCAATTGATTTCTACCCCTCC CTCTTCCTTATTATTCTGTCTTCCAAATGTTCTGTATCTTCGTGGGCTTTGCCCCAATCTTTGGTATGCAATTTTACCAGTTTTGTTATATTACTGAGTT CTTAATTTTTTTTTTACATTTCTAAATGCATATTTCTAACTTTAAATAAAA
• Tissue: pods
• Gene name: LI_gene_193777;
• Additional information: details;

Expression of Ll_transcript_506010

FPKM

• PAB: 80.5
• PNAB: 267.4
• PS1: 165.3
• PS2: 118.7
• PS3: 168.7
• PW1: 329.6
• PW2: 333.6
• PW3: 391.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_506010

• Blastp: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase from Cryophytum with 88.45% of identity
• Blastx: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase from Cryophytum with 88.45% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458018.1)
• Pfam: Cobalamin-independent synthase, N-terminal domain (PF08267.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;