Ll_transcript_506015

• Id Trinity: TRINITY_DN52570_c0_g1_i19
• Name Transcript: Ll_transcript_506015
• Sequence: CTGGAAACTATAAAACTAGTTGAATTTTCTTGTTTTTTTGTTAATAATTGAAACTAGATGGAGTACCTCTCTTATCATTAATCAAATATTGGTTTATATA TAATGACCGTGTTAATTAAGATAACGGATATTATATTTTTTTTCCTATATATTCTTTTTGTCCATGGTAATTAATTTTTTCACTCAATTTTCTCCAATAT ATACTTTTTTCTGTGTTTGCCTCTCCTTAAGTTAAACTTTTGACCTTAAGAATCTGTAGTACCTTACGCCTTACACCATTACATCAATGTTTTGTCAGTG GAATCATGATTAGAAGTACTAGATTCCTTACATCACATTTCTACATCTATTTATAACCATTACTTATTTCACCATTAACCTTTCTCTACCCCAAAAAAAG TGAAAATTTAGAGTGCAAACAACAGTACCATATTAAATTCTGTAATGGGTCCTGTTCAAATTGTGTGATCTTTTACTTCAGCTTGTTTAGTAATAAGTTT TGTGCTCTGTCTATTTAATAATTTGTGATTCTTCTGTTCATTAGCGTTTAAAGCAGAAAATGTTTCTTCTGAACTTGAAATCACAACTTATCTACACCCG TTAATGAAGATTAGATTATTGGTTATTAGACTGATAGCTTGTTTTTCTAATCATTAAGAGGTGCATTGAGGTGTGAAATTTAATAGGCTTTAAATTGTAG TTGCGGTTATGTTATATTTAACGCAATTGCGGAAATGGCAGCCGTAATTGCTGTCCTGATGCCGTTGCAGAAACTCCTGAAACTGCAATATTATGGCTGC AATTGCGGTTGTAAAGTGGAATTTAAAACAATAGACTTGTCAAACATAGAAAACTGAGTTTTGTTTGCAATTTTACTTGATGCAGCAGAACAATGGCATC CCACATTGTTGGATATCCTCGCATGGGCCCGAAGAGAGAGCTGAAGTTTGCTCTGGAGTCATTCTGGGATAAGAAGAGCAGCGCCGAGGATTTGCAGAAA GTGGCATCCGATCTTAGAGCATCCATCTGGAAGCAGATGGCTGATGTTGGTATCAAGTACATCCCCAGCAATACTTTCTCATACTATGATCAGATGCTCG ATGCAACCGCCATGCTCGGCGCCGTTCCACCAAGATATGGATGGAGTGGTGGTGAGATTGGATTTGATACCTACTTCTCCATGGCTAGAGGTAATGCATC TCTGCCTGCAATGGAGATGACCAAGTGGTTTGACACCAATTACCACTTTATTGTCCCAGAATTGGGTCCCGATGTCAACTTCGCTTATGCTTCTCATAAG GCAGTGGATGAATACAAGGAGGCCAAGGCGCTTGGAGTAGATACAATTCCAGTCCTCATTGGCCCGGTATCATACTTAATACTCTCCAAACCTGCTAAGG GTGTTGACAAATCCTTTTCTCTTCTCTCCCTTCTCCCAAAAGTCATTGCTGTCTACAAGGAGGTTGTGTCCGATCTTAAGGCAGCTGGTGCTTCATGGAT TCAATTTGATGAACCTACCCTTGTCACAGACCTTGATTCTCACCACTTGAAAGCATTTACTGCAACATACTCAGATCTTGCATCTACTTTATCTGGTTTA AATGTTCTCGTTGAGACATACTTCGCTGATATTCCTTCCGAGGCATTCAAGACCCTCACAACTCTTGACGGTGTCACTGCATTTGGATTTGATTTTGTCC GTGGAACCAAAACTCTCGATTTAATCAAGGGAGGATTTCCTAGTGGAAAACACCTCTTTGCTGGTGTGGTTGATGGAAGGAACATTTGGGCTAATGACCT TGCTGCTTCTCTCAACACATTAAATGCTCTTGAGGGAATTGTGGGCAAAGATAAACTTGTTGTGTCCACCTCCTGCTCACTTCTTCACACTGCTGTCGAT CTTGTTAACGAGACCAAGTTGGATAACGAGATCAAATCATGGCTGGCTTTTGCTGCACAAAAAATTGTTGAAGTAAACGCATTAGCCAAGGCATTGTGTG GTCAAAAAGATGAGGCTTTCTTCTCTTCGAATGCCTCGGCTCTAGCTTCAAGGAAGTCCTCTCCCAGAGTGACTAATGAGGGTGTTCAGAAGGCTGCTGC TGCATTGAAGGGTTCTGACCATCGTCGGGCTACTAATGTCAGTGCCAGATTGGATGCTCAGCAAAAGAAGCTTAACCTTCCAGTTCTCCCAACCACTACC ATTGGATCCTTCCCTCAGACTGTTGAGCTGAGGAGGGTGCGCCGTGAATACAAAGCTAACAAGATCTCTGAGGAAGAATATGTAAAATCAATTACAGAGG AAATTCGCAAAGTCGTTGTTCTCCAAGAAGAGCTTGATATTGATGTCCTAGTACACGGGGAGCCTGAGAGGAATGATATGGTTGAGTACTTTGGTGA
• Tissue: pods
• Gene name: LI_gene_193777;
• Additional information: details;

Expression of Ll_transcript_506015

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 0.2
• PS2: 0.1
• PS3: 0.3
• PW1: 0.1
• PW2: 0.4
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_506015

• Blastp: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase from Cryophytum with 85.43% of identity
• Blastx: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 from Arabidopsis with 84.63% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428767.1)
• Pfam: Cobalamin-independent synthase, N-terminal domain (PF08267.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;