Ll_transcript_506016

• Id Trinity: TRINITY_DN52570_c0_g1_i20
• Name Transcript: Ll_transcript_506016
• Sequence: AGTGATGATATGGGGTGTATAGAATTTAAAGTCATGTGAAAATGGGAATGCCATGTGATAGTTAGATCTGATGCAGAAAAATGCTATAAATAAGCATTAA ACCATCACTTATCACTTACCTTATTTTCTCCAACAGATAACTGAACTCATCTCATTAAGGTAACTAACCCAAACTCAAATTCTCTCTAAATTTCATTCCC CTCATTAAATTTCACTTTCATTTTCACAACTCTTCATTTTCTCTTCTTTACTTCATTTCTCTCTTAATTTACACTCACTTCAATTTCTCACCACACGAGA TTTATAACCGTCAAATCGTAATGTTCACACTTCGTCAATGTTTTAGGTTATAGATCTGTTTTGTTTAGTTACCGTAATGTGTAGATCTATTGGATCTGGA ACTTTTATGCTATGATTTCTTAATTTCGATTATTTATGACACTCAAAATTAAAATTTAATTTTAAATCTGTTAGTTTGTGATATTTCATTGCTCTGAAGC TGTGATTTTCGTATAATTTGCTATTTCTTTTCAAGATAGTAAGTGTTTTTAGTTCTGCTATCTTCTGAGGCATTTTTGGTTTATATTGTTTTTGAGTGAA AACTAATTTGGTCCTTATAAATTTGTACATGTACGATTCTGATCTCCGAAAAAGTAAAAATCCAAATTAGTACTAAGATTAGGATTGTCAGTCAAAATAG TACTCACCAAGAGTCATTAAAAGTAACTAATTTGACCCGCATTTGAAATTTTTTCAGACTATTTTCAATTTTCGAGGGACCAAATTGGTACCTAACCCAA AATAGGTATATACTCATTTTTTAAATGGTTAAAAATGTGTGGCCCAATGCATAAGGATGAAGGATGATTTGAACTCATGACCTTCATAGCTCATAAGGCA AACAACTTGACCGATGCATTGAGGCTTAGTCCTTTTTTTAAATGCCTGCTTATAGAAATTTTGATTACAAGCAGTTTTGAACACGAGAAATAAGCTTATG CGCTGTTGAATATCTTAGAATATGCTTATGTGGTTAGCTTTTCAAATCTAGTTCGTGTTCGGGGTAACTCGATTTGATTATAAGGGACTTTGAACGCTAA ATAGGTGAAAGTGACTAAGTGAGTGTTGATTTGGATTTTAATCTGTTAACAGAACAATGGCGTCTCATATTGTTGGATACCCACGCGTGGGCCCCAAGAG GGAGCTCAAGTTTGCTTTAGAGTCCTTCTGGGATGGAAAGAGCAGTGCCGAGGATTTAAAGAAGGTGTCTGCAGAGCTCAGGGCATCCATCTGGAAGCAG CAGGCTGGTGCTGGGATAAAGTACATCCCTAGCAACACTTTCTCATACTACGATCAGGTGCTCGATGCCACCGCTACCCTGGGTGCTGTCCCACCTAGAT ATGGCTGGACCGGCGGTGAGATTGAGTTTGATACCTACTTCTCCATGGCCAGAGGTAATGCCTCTGTGCCTGCCATGGAGATGACCAAGTGGTTCGACAC CAACTACCACTTTATCGTCCCTGAATTGGGACCTGATGTGAACTTCACTTATTCTTCTCATAAGGCTGTTGAAGAATACAAGGAGGCCAAGGCGCTTGGA ATTGATACAATTCCTGTCCTCATTGGACCAGTCTCATATTTGTTGCTCTCCAAGCCTGCCAAGGGTGTTGATCAATCATTTTCTCTCCTCTCTCTCCTCC CAAAGGTCCTTGCTGTCTACAAGGAGGTTGTGGCTGATCTTAAGGCAGCTGGTGCTTCATGGATTCAATTTGATGAACCCACACTTGTCTTGGACCTTGA ATCTCACAAGTTGCAAGCATTTACTGATGCATACTCAGAACTTGCATCTACTTTATCTGGTTTGAATGTTCTTATTGAGACCTACTTTGCTGATATCCCT GCCGAAGCATACAAGACCCTCACATCTTTGAGCGGTGTCAGTGCATTCGGATTTGATTTGGTCCGTGGAATTAAGACTCTTGATTTGATCAAGAGTGGAT TTCCCACTGGAAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCTAATGATCTTGCTGCTTCTATCAGTACATTGCAGGCTCTTGAGGG CATTGTTGGCAAAGATAAACTTGTTGTCTCAACCTCCTGCTCACTTCTTCACACTGCTGTTGATCTTGTTAATGAGACCAAGTTGGACGATGAGATCAAG TCATGGTTAGCTTTTGCTGCCCAAAAAGTTGTTGAAGTAAATGCTTTGGCTGCTGCTTTGTCTGGTAACAAGGATGAGGCCTTCTTCTCCTCTAATGCTG CAGCTTTGGCTTCAAGAAAGTCCTCTCCAAGAGTGACTAACGAAGCTGTTCAGAAGGCTGTTAGTGCTTACCTTTTCTTGTTTCTGTTCAACTGCTCATT TTGTTCATTTGGATATGTTATAAAAATTGTTTGGCTGTTGCTCAATACTTCTTTTCTTTCCCTGTCAGGCTGCTGCATTGAAGGGTTCTGAGCATCGCCG TGCTACTAATGTCAGTGCCAGACTTGATGCTCAACAAAAGAAGCTTAACCTTCCAATCCTCCCAACCACCACTATTGGATCCTTCCCTCAGACTGTAGAA GTGAGGAGGGTACGCCGTGAATACAAGGCTAAAAAGATCTCTGAGGAAGAGTATGTTACAGCAATTACTGAGGAGATCCGCAAAGTTGTTGAACTCCAAG AAGAGCTTGATATTGATGTCTTGGTGCATGGGGAGCCTGAGAGAAACGATATGGTTGAGTACTTTGGTGAGCAATTGTCAGGCTTTGCCTTCACTGTTAA TGGGTGGGTGCAATCCTATGGATCTCGTTGTGTGAAGCCACCAATCATCTATGGTGATGTGAGCCGCCCAAAGGCAATGACTGTCTTCTGGTCATCTAAA GCTCAGAGCTTGACCAAACGCCCAATGAAGGGAATGCTTACTGGCCCTGTCACCATCCTCAATTGGTCTTTCGTCAGAAACGATCAGCCTAGATCTGAGA CCTGCTACCAGATTGCTTTGGCTATCAAGGATGAAGTCGAAGACCTTGAAAAGGCCGGCATCAATGTTATCCAAATTGATGAGGCTGCTTTGAGAGAGGG ACTACCATTGAGGAAGTCAGAGCATGCTCATTACTTGGACTGGTCTGTTCATTCTTTCAGAATCACTAATGTTGGTGTTCAGGATACCACTCAGATCCAC ACCCACATGTGCTACTCTAACTTCAATGACATTATCCACTCAATCATTGATATGGATGCTGACGTGATCACCATCGAGAACTCTCGTTCGGATGAAAAGC TCCTATCAGTCTTCCGAGAAGGAGTTAAGTATGGAGCTGGAATTGGCCCTGGTGTCTATGACATTCACTCCCCTAGAATACCTTCGACCGAAGAAATGGC GGAGAGGATCAACAAAATGCTTGCAGTTCTTGAGACTAACATCCTATGGGTCAATCCAGATTGCGGGCTCAAAACTCGCAAGTACACGGAAGTGAAGCCA GCCCTCGAAAACATGGTTGCTGCAACAAAAGTCATCCGCAGCCAGTTGGGAAAGTGAATGACATAAAAAGAGTATAAGAATATCAGCAGTAAACATGGTT CTGCTTGATTTTACTAGGAACATGGTTGCAATAACTGTGTTGAATATCAACAATAAACATGGTTGCAATAACTGTGTGTTGAATGTTTAGGTATTTAGTA TGATGCTCTTTGTGAGTATCTTATATTTTGTATTTTGGTGCCATTGCCTCAATCATTATTGATATGCAAATGCAATTTATGATTTTATGAAATAACCATG AGTATCTTAAATCAAAA
• Tissue: pods
• Gene name: LI_gene_193777;
• Additional information: details;

Expression of Ll_transcript_506016

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.2
• PS3: 0.3
• PW1: 0.2
• PW2: 1.8
• PW3: 14.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_506016

• Blastp: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase from Cryophytum with 85.89% of identity
• Blastx: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 from Arabidopsis with 91.14% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458018.1)
• Pfam: Cobalamin-independent synthase, N-terminal domain (PF08267.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;