Ll_transcript_505996

• Id Trinity: TRINITY_DN52570_c0_g1_i3
• Name Transcript: Ll_transcript_505996
• Sequence: CCAATGAAGGGAATGCTTACTGGCCCTGTCACCATCCTCAATTGGTCTTTCGTCAGAAACGATCAGCCTAGGTATAAACTCAAGACCCTTTACAATGTGG TGGGAAAAGAACAAGCAAACATTTAAAGTATAACCATATAGGAAAAACTATCATTATTCACCACACTGTTATGTCTAACATTTATGAATCTATTTTCAGA TCTGAGACCTGCTACCAG
• Tissue: pods
• Gene name: LI_gene_193777;
• Additional information: -

Expression of Ll_transcript_505996

FPKM

• PAB: 0.8
• PNAB: 2.9
• PS1: 5
• PS2: 1.2
• PS3: 2.6
• PW1: 3.5
• PW2: 6.3
• PW3: 10.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_505996

• Blastp: -
• Blastx: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 from Oryza sativa with 78.79% of identity
• Eggnog: Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation (By similarity)(COG0620)
• Kegg: Link to kegg annotations (4352833)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_003624679.2)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;