Ll_transcript_506316

• Id Trinity: TRINITY_DN52572_c1_g3_i4
• Name Transcript: Ll_transcript_506316
• Sequence: CATACTCCTCCACTGTAACTTCCACAAACCTAAACGACAGCGTTTCCCTCCACCTCCAAACCTAAACCTTCATCTCCCTTCACCTTCACCAATTTCAAAT CTTTGGCAGCAATGAGAAGACCCAAATCAAGGGATTTCAAGAAGCAACAACGAATTTCAGAAGAAACCGAGATAGAGCTATTGAAATCATGGATCCAAAC ACAACAAGTAGACTCTGGTTCAAACCCTATGTCACTTCCTCCGCTTCCAAAAAACGCACCCACTGGGCGCTTAGATGAGAACACGTTTTCGCGGTACGCG GGTGTGGCGAATTTCAATCAGCTACCATTGTCGAAGAAAACGAAGGATGGTTTGAAAGATGGAAAGTTCGTGAACATGACTGATATTCAGAGAGCGTCTC TTCCTCACGCGCTCTGTGGACGTGACATTCTCGGTGCTGCAAAAACTGGTTCTGGAAAAACTCTTGCTTTCATTATCCCTGTGTTAGAGAAGCTATACAA AGAGAGATGGGGACCTGAAGATGGGGTTGGCAGCATCATCATTTCTCCTACCAGGGAATTAGCTGGTCAGCTGTTTGATGTGCTGAAGTCGGTTGGGAAG CACCATAATTTCAGTGCTGGACTCCTCATTGGTGGTCGCAAGGATGTTGACATGGAGAAGGAACGTGTTAATGAGCTTAACATATTGATCTGCACGCCCG GTCGCCTTCTACAGCACATGGATGAAACTCCCAATTTTGATTGTTCTCAGATGCAGGTTCTGGTGCTAGATGAGGCTGATCGTATTCTTGACAGTGGATT CAAGAGGGAACTAAATGCAATCATCTCACAACTACCAAAGCGCAGGCAAACCTTGCTTTTCTCAGCAACTCAAACTAAGTCAGTTCAAGATCTTGCAAGG CTTAGTATGAAGGACCCAGAGTATCTGAGTGTTCACGAAGAATCTGTGACTGCCACTCCTACTCTCTTGAAGCAAATTGTGATGGTTGTTCCCCTGGATC AAAAGTTAGATATGCTTTGGAGTTTCATAAAGACACATCTCCAGTCAAAAATACTTGTCTTTCTTTCAAGCTGCAAGCAGGTAAAATTTGTCTATGAAGC ATTTAAGAAACTTCACCCTGGTATTCCGTTGAAGTGTCTTCATGGGAGGATGAAACAAGAAAGAAGAATGGCCATATATTCCGAGTTTTGTGAGAAGCGC TCAGTTCTCTTCTGCACTGATGTTGCTGCAAGAGGACTTGACTTCAATAAGGCAGTTGACTGGGTTGTTCAGGTGGATTGTCCAGAAAATGTGGCATCTT ACATACACAGAGTTGGTCGTACTGCTCGTTATAAATCTGGTGGGAAGTCAGTTTTATTTCTATTGCCCTCTGAAATTCAGATGCTTGAAAAGTTTAAAGC AGCAAAAGTTCCAGTGCATTTTAATAAGCCAAGGAAAGAACTTCTGCAACCGGTTTCTGCTTTGCTGGCATCCTTGCTGGCCAAGTATCCAGACTTGCAG CCTCGCGCTCAAAGGGCATTCATCACATATTTGAGATCCATACATCTCCAAAAGGATAAAGAGATATTTGATGTTCTGAAACTACCTATTGATGAATATG CAGCATCATTAGGTTTGCCAATGACTCCCAAAATCCGTTTTCTCAACCAGAAAATTAAATCTAAGGCTGTGTCAAAAGAACAAATTTTAGCTGAACCTGA GAGCCCAAAGAAAGAAAACGCATTGATAGTCACGAAAAAGAAGTTAGCCACTGATGATTCCAACGATGAGGAAGAAGATAATGATCTTTTTATGGCAGCT GATACCTTAAATGAAGATGAAGGGAAGGCATCTGAAATTGGAGAAGTCATACCTGCAACTCGTGTGTTGAAGAAAAAGAAGCTCAAGATTAATTTGCATA GACCACTGGGGTCCAGGGTTGTATTTGATGATGAAGGCAATACTCTTCCTCCATTAGCTAGGATTGCTGACACTCAAAGTGGCAAGGAATCAATGCTTCT TGACCCAGAACAAAAAGCTGAATACTATAGAAGGATGCGAGAGGATTTGAAGAAGGCAGACAAGGAAGATAAGCTTGTCGATCGTCAGCGGCGTAGAGAA AAAAGAATCAAGCAGAAGATGAAGTTGAAGGAAGTGGATGAAGACGATACTTCTGGGTCAGAAGAAGAAGAAACCGATGATAGAGCGAATAAAAGGAAGA AAGTATACTTTGATAGTGATAGCGACGAGGGTGAACGAAATGATGGGAAAGCAGGTGTTACTGTGGAGGAACAGGAAGCACTGGCTTTGAAATTGTTGGA TTCCATGCAATCATAGGATACACATGCATATTCAAGCTGTGACATTTTTGTGATAGAAAAAACATGTAAAATGGAGGATGTTTGTGGAACTTATTGAGAG AAGTATTATGAAGAATGAATTTTGCGGGCACTATATTATGAAACTCG
• Tissue: pods
• Gene name: LI_gene_193791;
• Additional information: details;

Expression of Ll_transcript_506316

FPKM

• PAB: 2
• PNAB: 13.5
• PS1: 10.2
• PS2: 14.3
• PS3: 13.7
• PW1: 8.4
• PW2: 8.1
• PW3: 10.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_506316

• Blastp: DEAD-box ATP-dependent RNA helicase 32 from Arabidopsis with 61.35% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 32 from Arabidopsis with 63.76% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (AT5G54910)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435563.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;