| Id Trinity | TRINITY_DN52579_c1_g2_i11 |
|---|---|
| Name Transcript | Ll_transcript_504999 |
| Sequence | TAAAAGTCAATACAGTTATTATCAGAACATGACCATGATTCCTTGTTCTCTAAAGAGTCTTGAAGGACACAAATAATTTGAAAGATCGTACGAAAGAAAC TTACTGTATCAATAATCACTACCACCAACATTGCGAGGGGACTCCCTTCTGGATTAATGCAAATGCTACAGAAGTAATTGCTATTTAGATTTTCAATTAT TTACCTTGCTACAAAAAGTTTGGCATTATACAGATTCAAGTGATTCATACATTACATCCTGCAGGTGGAATAGATCTTGTTCTATGGAGTCGCAAATCAA ACTGCTACTTTTAGTTTTTGGTCCAGAAGCAGAAATCTCCTTCCCTAATGCCTTTAAAGCTTCTGGATAGAATGGTGTGACTAGTTTCTCTTAGGCCATT GTGATGAATGCACTGCTTGTTTATTCTCAGCAGAGCAAAGAAACATGTAACTACTAGTTATAACTTTGTTTAAGCACGAGATCCTATGAAAAGGGCAAGA TGATTTTCCATCTCAAACATCACAAACTAACTACAATACCTTAAGGACAGTTTCGGTGACTTTAGCAATTGGTAACCATGTCAGTCACACAGAAGATAAA CAAACTCCAGAATGATGCCACTAGAATTCAACTATGGCTAAGATGGGTACCTACTATTTCCTGCTGAAATTAAAGCAAATAAGTATGCAAGGTAACATAA ATGACAAACTAGTACAAGAAAAGGACAGAAACAGAACAATAACAAATGGATGCAGAGCTCCACCGTTTTGAAACTACCCAACTCCATCAAAACTTGTGAG GAAAAACAAGGCCCATCGGAAAATCCTTCATTCACCATTAGGTGAAGCAATGGAAGTGTAAAGTATATAAAGTGTAAAGGTATATGAGTAGTGTTATTTG TAATGTTTAAGATTGACAAATTTTCTTGCAATAAATGAATTTATATCTTTATCTCACCAACTATAAACACCTAAAAATTTAGAAGCTTTATGAGGCAATA GTTTAGAAGACTCAGAATCAAAGCCGTTATTCTCAAGTTTCTGATACTGAACATATTCTTCATTTTCATCTTGATACATAACCTCTTCCACATTCTCTCT TTTCTCCACACCATAACACTCCCTGGGCTTCTCCTCCGCCTGCCACACGTTCCGGTGCGTCGTGAAGATCTCCACCATTCTTGCATCCGCCTTCGATACA TTGTCTCCCTCAGCTCCTCTTCCACAATGCAGAGCTTCATATTGAAGTTGTTTGGTAAGAGTGACAGGAAGACAGAGAAGGTAAAGTAAAGGAGTTTGGC CCAGAGTTAAATAAAAGCGTGCAGCAACAACAGCATAGCCCCTTCAACGAATGATCTCGCTATTAAATAATCGGGGTGCATCATCGATTAGCGCTCGCTA ACTACTCTTTCCGATCAACATCACCGCCGACTCCAATCTTCCTCGCCGGAAACCCTATCTTTCACGGTTCTGCTTCTGATCACCACTCGCTCAGAGGGGA AAGCATAACTGCGTTCTTGTTTTGCTCCAAATTCAATATCATCGGGAAAAAAGTGGCGATACCGGAGGTCTAGGGTTCCGGTAGAATTCTCTGAAGGTTT GACTGTCCGAGCTCTGATTGGTTCATAATTACCTGATTGAGATAATTTGGAGGGAAATTTGCAAGGGTTCGTCGCCGACGGTGAGGGGAGGAAAACCTAA TTTCTGTAATTTGGCCTTTCTTCTTCGGGGGAATTTCGGAGTGAAACAGCGCCTGCGAAGTTAGAATTTGAGGGTTTTAATTGGGCACAGAAGGCGTAAT AAGAAGATATTAATTGGAGTCCAGTGCTGTAGCTGTGCTTTGATGAGTTATTGATTCTTGCATTGAATTGTGATATCAGTTCTGCCACACAACATGGGGT ACCATTCGGATAATTCACAAGACGGGAGGGAAGAAGATGATGAAGAAGAATATGAGGAGAATGGCAAGGGTAATCGTTTTCTTGGGTTCATGTTTGGAAA TGTTGATAACTCTGGTGATCTTGATGTTGATTACCTTGACGAGGATGCAAAGGAGCATCTATCTGCATTGGCTGACAAGCTGGGCCCATCACTGACAGAT ATAGATTTGTCAGGAAAATCACCTCAAACACCACCCGATGTTGTTGAACAAGACTGTGGTGAAAAAGCCGAAGATGCGGTTGATTATGAAGATATTGATG AAGAGTATGATGGTCCAGAGACTGAAGCTGCCACTGAAGAGGATTATTTATTGCCAAAAATGAATTTTTTCTCTACTGAAGCCTCTCTTCAAGTCTTGGA GTCCAGAGCTTCTGTTTTTGACGATGAAAATTATGATGAGGAATCTGAAGAGGAACAAGACTTGGTGAATAATGATTCTAAAGTTGATGACATCTCTTTA ACCGGGGAGCAGAAAGAGAGTTCTGTAGATGTGTCTAAAGGAGAGAGCGCTGAGGAACTTGGTCTACAAGTTGACTTACCACAGACTGAAGAATTGGACA CCGAAATACAAAAAGTTGTGGAAGAGCCTGAAGTTCTGAAAAGGTCTACACCATTGCCCATTTTGTGTGTGGAAGATGGGGTGGCTATTTTACGCTTCTC TGAGATCTTCGGTATTCATGAACCTCTGAGAAAGGGAGAAAAGAGAGATCATCACCATTCTATTCCTAGAGATAGGTACAAGTCTTTCAATTTTTCTGAT GATACTGTTGAAGAGGATGAAGAGGCATTCCTCAAGGGCTTCTCCCAGAATCTCTCACTTACTAGACAGGCTTGTGTAGTTCGTAATGATGTATCAGAAA GCAATGATGTTGACTTGGAATTTCCAAAATTTGGGTTTCTTCATGGGGATGCCTCAATGGATGTGAAAGATGATAGGCAACAGAAAGACTGTTGTCAAAG TGCTGAACCAATGAAAGTAGATTTAGCTGAAGGTCTTTCCCGAAAAGATGATTCCCTCATAGGGTCCAGCTTTTACCCTCTTGATCAGCAAGACTGGGAA GATGAAATCATTTGGGGCAATTCTCCAGCTGGTGATAATATTGTTCAAAGCTGTGAAATTTATGGATCAGATTTGGGAGATTCTGGTGGCAATGAAATAG AAATCGAAAGTGAGAAAAATCTTCAGTTGAATCCCCTGAAGACAGGGGAGAAAGATGACAATGACTTCACATGTGGCCCTTCTGTCTCAGTGGAGCCCTT TGGTTCAAGGGATACTTCAGGATCTAAAACTGATTTATTGTCAGAAAGCCTATTTCATCCCCAGCTTTTGAGGTTGGAATCCAGATCTCAAGAGGATAGC TCCTGTCCTGCCGATGGTAGAGGGGTGAATATAACTGAAAAGCATAACCAAATTGGTCAAGTAAAGTGTTTTACCAAGGTTTTGTCTCAAAACAGAGAAA TGATGGAGGGTTCCTGGCTAGACAAAATAATATGGGAGGAGCTTGATAAACCTATTATAAAACCGAAGCTTATCTTTGATCTTCAGGATGATCAAATGCA CTTTGAAGTTTTGGATAGCAAGGACACTAGACATCTTCGCCTTCATGCTGGGGCTATTATTTTAACCCGTTCCCTAAAATCGAACAGTGGGGACTCTTCT GAGCTACCTGGACATGGAGGTCAGCATGGATGGCGAAGTGTTGCTAATGACAAACACTACTCAAACAGGAAAACTTCTCAGCAACTGAAATCAAATTCTA AAAAACGCTCGGCTCATGGGGTCAAAGTTTTTCACTCACAACCTGCACTGAAGCTGCAGACGATGAAGTTGAAGTTGAGCAATAAAGATATTGCAAATTT TCACCGGCCGAAAGCATTATGGTATCCCCATGACAATGAGATGGCTGTCAAAGAACAAGGGAAGTTGGCAACACAAGGACCCATGAAGATTATTATGAAG AGCTTGGGCGGCAAAGGGTGTAAACTGCATGTTGATGCCGAAGAAACTCTCTCATCTGTTATAGTAAAAGCTTCTAAAAAGCTAGATTTCAAGGCATCCG AGACAGTGAAAATATTTTACTCAGGGAGGGAGCTTGAAGATTACAAATCACTTGCTGCACAAAATGTTCAACCAAACTCCTTGTTACATCTTGTCCGTAC AAAGATACATTTGTGGCCAAGGGCACAAAGGGTTCCTGGTGAGAATAAGTCTTTACGTCCTCCAGGGGCATTCAAGAAAAAGTCTGATCTGTCAGTGAAA GACGGACATGTTTTTTTGATGGAGTATTGTGAGGAAAGGCCTTTACTTTTGAGTAATGTTGGAATGGGTGCAAGACTTTGTACTTACTATCAAAAATGTT CACCAGATGACCAATCTGGCTCCTTATTACGTAACACAAATAGTAGCTTGGGGCACATTATTTCTCTGGATCCTGCTGATAAATCTCCCTTCCTCGGTGA TATAAAACCTGGTTGTAGTCAGTCATCACTCGAGACAAATATGTACAGAGCACCCTTATTTCCTCATAAAGTTCCGTTAACTGACTACCTGCTGGTTCGT TCATCAAAGGGAAAACTATCTTTAAGGCGCATCGATAAAGTTAATGTTGTTGGACAGCAGGAGCCTCTCATGGAGGTATTATCACCTGGAAGTAAGAATC TTCAGACTTATATGATGAACAGGCTATTGGTGTACATGTGCCGTGAATTCCAAGCTGCAGAGAAGCGGCATTTACCTCCATACATTCGTATTGATGAGTT CTTGTCACAGTTTCCTTACCTTTCAGAAGCGTCTTTCCGCAAGAGAATCAAGGAATATGCCAATTTACAGAGGGGATCGAATGGACAATCAATTTTAGTT AAAAAGCGGAACTTTCGCATGTGGTCAGAAGATGAATTAAGAAAAATGGTGACACCAGAGCTTGTTTGTGCCTATGAAAGCATGCAAGCTGGCCTGTATC GTCTAAAACATTTAGGAATAACTGAAACACACCCTACTCATATTTCTTCTGCAATGAGTCGGCTTCCTGATGAAGCAATAGCACTGGCTGCTGCATCACA CATTGAGAGGGAGCTACAAATTACTCCTTGGAACTTGAGTAGCAATTTTGTTGCCTGTACAAGCCAGGGTAAGGAAAATATTGAGCGAATGGAAATTACT GGTGTTGGTGATCCATCTGGCCGTGGCATGGGTTTCAGCTATGCACGGGCACCTCCAAAGGCACCAGTGTCTAGTGCAATGGTGAAGAAGAAAGCTCCTG CTAATCGGGGAGGTTCCACTGTCACTGGTACAGATGCTGATCTACGTAGACTAAGCATGGAGGCTGCACGAGAGGTTCTTCTTAAGTTCAATGTTCCAGA GGAGGTCATTGCAAAACAAACCAGATGGCATCGCATTGCTATGATACGCAAACTTTCAAGTGAGCAAGCTGCATCTGGGGTTAAGGTTGATCCGTCAACT ATCAGCAAATATGCTCGTGGGCAGCGGATGTCCTTTCTTCAGTTACAGCAGCAGACTAGAGAGAAGTGCCAGGAGATTTGGGATCGACAAATCCAGACTT TGTCAGCTATAAATTATGATGAAGATGAGAGTGAGTCAGAAGGAAATAGTGATCTAGACTCTTTTGCTGGAGATTTGGAAAATTTACTTGATGCTGAGGA GTTTGAGGAGGGTGAAGAGGGTACTAATGACTCAAAACGTGATAAGGGGGATGGTGTTAAGGGTCTTAAAATGAGAAGACGTGCAACTTCTGCCCAGGCA GAAGAGGAAATAGAAGACGAGGCAGCTGAGGCTGCTGAATTACGCAGGTTGCTTATGGATGATGATGAAGCTGACCGGAAGAAAAAGAAGAAAGCTAGAG TTGTGGTGGAAGAAGCAAGATTGGTACCAAAGCTACAATCAAAATTCATATTTGACAACAATGAAAAAGTTAACCAAATATCAAATACTTTGCAACTAGA TGCTACTAAACATTGGAAAGAGGATATAATTACAGATCTCAGGGAGGAGGAAATTTTTTCTTCTAAAAAAAGCAAATCAGTGAAGGTCAGTAAGGCAAAG AAGAATGACGCTGCACCTATCAGTCTACCCAATAAAAAGATTAAATTAAATATGGGAGAACCAATCAAGGTATTTAAAGAGAAAAAACCATCAAGGGAAA CTTTTGTTTGTGGAGCATGTGGCCAGCTTGGACACATGAGAACAAACAAGAACTGTCCAAAATATGGTGAAGACCTTGAACCACAACTTGAATTTACAGA CATGGAAAAATCATCTGGAAAAGCAGACCCCTCTAGTTATTCCCAGCGTAAAGCCCTCCCCAAAAAGTCAATATCAAATAGCGCAACAAGGATTGCTCCT GTTGAAAATTCATCAAAAATTCCACTGAAGTTCAAATGCAGCTCCAATGAGAAATCTTATGATAAACCTGCAATTGATACCCTGCAGAGTTCTGACAAGC CTGTCACTTCTGACACTGAAACTGCTAAGCCTGTTAAGGTCAATAAGATAACTTTTCCCAAGAAAGCGAAACCAGATGATACTCAGGCTGATTCTCATTC GCCTGCTATTGTTATACGGCCTCCTACTGATTCAGGTAGAGGTCAGATAGATTCTCATAATAAGCTCCCAATTAAAATAAGACAGCCACCGGTAGAAGTA GATAGGGAGCAATCGCACAAGAAGAAGATTGTTATAAAACACTCAAAGGAAGATTATTATAAAATTGATCAGGACCTGGACAGTCCTGGTGGAAACACGG GATTTGAACACAGAAAAACTAAAAGAATCGTTGAATTATCGAATCTTGAGAAGCAGAGAAATCAGCAGCCTATGTATTCAACTGAAGGTTTGGTAAAATG GAAAGGTAAAGAGGATAGAAGATGGTGGGAAGGGCAAGAGAAACAGAAAAATGAAGCAAGACTCAGAGAAGACAGGGCATGGAGGCATCACAAAGAATTC AAGATGCCGAAAGAGCAAAAGATAGATGAGATTAGAAGATATGAAGAAGATATTAGAAGAGAGAGGGAGGAGGAAGAACGGCAAAAGGCAAAGAAAAAGA AGAAAAAACTCGAGTTTGGAGATGAATATTTAGATGACCCCAGAACAAGACATGATAAGAGGATGCTAGATAGGAGCGGAAAAAGAAGAAAAAACTCGAG TTTGGAGATGAATATTTAGATGACCCCAGAACAAGACATGATAAGAGGATGCTAGATAGGAGCGGAAAAAGAAGATCTGTTGAGTTAGGAAAGGGTGGTG CAGAATATGTGCAGCCAATAAAACGCCGAAGAGGGGGAGGTGGAGAGGTTGGTTTGGCAAATATTTTGGAGAGCATTGTGGACTCCATTGTGAAAGACAG GAACGATCTGTCCTATCTATTCCTGAAACCGGTGTCGAAGAAAGTGGCACCTGACTACCTTGACATTATAGAGAGGCCTATGGATCTTTCCAGAATCAGG GAGAGGGTGAGGAATATGGAGTACAAGAGCAGAGAAGATTTCAGACATGATATGTGGCAGATAACTTACAATGCTCATAAATATAACGATGGCCGAAATC CAGGAATTCCTCCCCTAGCAGATATGCTTTTGGAACATTGTGATTATTTGTTGAATGAGAATGATGATAACCTCACTGCAGCTGAAGCTGGCATTGAAAT TAGAGATTTGTAAGTCATGCTAAATTCAGATCATGATATGAAGGTTAGGTAGAATTGTTTTAATTATTTTGGAATGTAGTATGGAAATGAGGTTGTAGTA TCACCATCTATAGTTCATTAATTTAGATTCATGTTGTGCCTCCTTTAGAGAGTTATATTAGATTAGATTTTATATTTGGTAGTTAAAAAAAAGAGCAAGA TTTTTCTCTAAAGATATACACA BLAST |
| Tissue | pods |
| Gene name | LI_gene_193872; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_504999
| Blastp | Transcription initiation factor TFIID subunit 1 from Arabidopsis with 52.16% of identity |
|---|---|
| Blastx | Transcription initiation factor TFIID subunit 1 from Arabidopsis with 51.33% of identity |
| Eggnog | bromodomain(COG5076) |
| Kegg | Link to kegg annotations (AT1G32750) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445197.1) |
| Pfam | TATA box-binding protein binding (PF09247.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |