| Id Trinity | TRINITY_DN52579_c1_g2_i13 |
|---|---|
| Name Transcript | Ll_transcript_505001 |
| Sequence | TAAAAGTCAATACAGTTATTATCAGAACATGACCATGATTCCTTGTTCTCTAAAGAGTCTTGAAGGACACAAATAATTTGAAAGATCGTACGAAAGAAAC TTACTGTATCAATAATCACTACCACCAACATTGCGAGGGGACTCCCTTCTGGATTAATGCAAATGCTACAGAAGTAATTGCTATTTAGATTTTCAATTAT TTACCTTGCTACAAAAAGTTTGGCATTATACAGATTCAAGTGATTCATACATTACATCCTGCAGGTGGAATAGATCTTGTTCTATGGAGTCGCAAATCAA ACTGCTACTTTTAGTTTTTGGTCCAGAAGCAGAAATCTCCTTCCCTAATGCCTTTAAAGCTTCTGGATAGAATGGTGTGACTAGTTTCTCTTAGGCCATT GTGATGAATGCACTGCTTGTTTATTCTCAGCAGAGCAAAGAAACATGTAACTACTAGTTATAACTTTGTTTAAGCACGAGATCCTATGAAAAGGGCAAGA TGATTTTCCATCTCAAACATCACAAACTAACTACAATACCTTAAGGACAGTTTCGGTGACTTTAGCAATTGGTAACCATGTCAGTCACACAGAAGATAAA CAAACTCCAGAATGATGCCACTAGAATTCAACTATGGCTAAGATGGGTACCTACTATTTCCTGCTGAAATTAAAGCAAATAAGTATGCAAGGTAACATAA ATGACAAACTAGTACAAGAAAAGGACAGAAACAGAACAATAACAAATGGATGCAGAGCTCCACCGTTTTGAAACTACCCAACTCCATCAAAACTTGTGAG GAAAAACAAGGCCCATCGGAAAATCCTTCATTCACCATTAGGTGAAGCAATGGAAGTGTAAAGTATATAAAGTGTAAAGGTATATGAGTAGTGTTATTTG TAATGTTTAAGATTGACAAATTTTCTTGCAATAAATGAATTTATATCTTTATCTCACCAACTATAAACACCTAAAAATTTAGAAGCTTTATGAGGCAATA GTTTAGAAGACTCAGAATCAAAGCCGTTATTCTCAAGTTTCTGATACTGAACATATTCTTCATTTTCATCTTGATACATAACCTCTTCCACATTCTCTCT TTTCTCCACACCATAACACTCCCTGGGCTTCTCCTCCGCCTGCCACACGTTCCGGTGCGTCGTGAAGATCTCCACCATTCTTGCATCCGCCTTCGATACA TTGTCTCCCTCAGCTCCTCTTCCACAATGCAGAGCTTCATATTGAAGTTGTTTGGTAAGAGTGACAGGAAGACAGAGAAGGTAAAGTAAAGGAGTTTGGC CCAGAGTTAAATAAAAGCGTGCAGCAACAACAGCATAGCCCCTTCAACGAATGATCTCGCTATTAAATAATCGGGGTGCATCATCGATTAGCGCTCGCTA ACTACTCTTTCCGATCAACATCACCGCCGACTCCAATCTTCCTCGCCGGAAACCCTATCTTTCACGGTTCTGCTTCTGATCACCACTCGCTCAGAGGGGA AAGCATAACTGCGTTCTTGTTTTGCTCCAAATTCAATATCATCGGGAAAAAAGTGGCGATACCGGAGGTCTAGGGTTCCGGTAGAATTCTCTGAAGGTTT GACTGTCCGAGCTCTGATTGGTTCATAATTACCTGATTGAGATAATTTGGAGGGAAATTTGCAAGGGTTCGTCGCCGACGGTGAGGGGAGGAAAACCTAA TTTCTGTAATTTGGCCTTTCTTCTTCGGGGGAATTTCGGAGTGAAACAGCGCCTGCGAAGTTAGAATTTGAGGGTTTTAATTGGGCACAGAAGGCGTAAT AAGAAGATATTAATTGGAGTCCAGTGCTGTAGCTGTGCTTTGATGAGTTATTGATTCTTGCATTGAATTGTGATATCAGTTCTGCCACACAACATGGGGT ACCATTCGGATAATTCACAAGACGGGAGGGAAGAAGATGATGAAGAAGAATATGAGGAGAATGGCAAGGGTAATCGTTTTCTTGGGTTCATGTTTGGAAA TGTTGATAACTCTGGTGATCTTGATGTTGATTACCTTGACGAGGATGCAAAGGAGCATCTATCTGCATTGGCTGACAAGCTGGGCCCATCACTGACAGAT ATAGATTTGTCAGGAAAATCACCTCAAACACCACCCGATGTTGTTGAACAAGGTGAAGTTGTATGCCAGGAAAAACTATATCATGCAGTTTTTGATATTC TGTTGACTGTGGTGAAAAAGCCGAAGATGCGGTTGATTATGAAGATATTGATGAAGAGTATGATGGTCCAGAGACTGAAGCTGCCACTGAAGAGGATTAT TTATTGCCAAAAATGAATTTTTTCTCTACTGAAGCCTCTCTTCAAGTCTTGGAGTCCAGAGCTTCTGTTTTTGACGATGAAAATTATGATGAGGAATCTG AAGAGGAACAAGACTTGGTGAATAATGATTCTAAAGTTGATGACATCTCTTTAACCGGGGAGCAGAAAGAGAGTTCTGTAGATGTGTCTAAAGGAGAGAG CGCTGAGGAACTTGGTCTACAAGTTGACTTACCACAGACTGAAGAATTGGACACCGAAATACAAAAAGTTGTGGAAGAGCCTGAAGTTCTGAAAAGGTCT ACACCATTGCCCATTTTGTGTGTGGAAGATGGGGTGGCTATTTTACGCTTCTCTGAGATCTTCGGTATTCATGAACCTCTGAGAAAGGGAGAAAAGAGAG ATCATCACCATTCTATTCCTAGAGATAGGTACAAGTCTTTCAATTTTTCTGATGATACTGTTGAAGAGGATGAAGAGGCATTCCTCAAGGGCTTCTCCCA GAATCTCTCACTTACTAGACAGGCTTGTGTAGTTCGTAATGATGTATCAGAAAGCAATGATGTTGACTTGGAATTTCCAAAATTTGGGTTTCTTCATGGG GATGCCTCAATGGATGTGAAAGATGATAGGCAACAGAAAGACTGTTGTCAAAGTGCTGAACCAATGAAAGTAGATTTAGCTGAAGGTCTTTCCCGAAAAG ATGATTCCCTCATAGGGTCCAGCTTTTACCCTCTTGATCAGCAAGACTGGGAAGATGAAATCATTTGGGGCAATTCTCCAGCTGGTGATAATATTGTTCA AAGCTGTGAAATTTATGGATCAGATTTGGGAGATTCTGGTGGCAATGAAATAGAAATCGAAAGTGAGAAAAATCTTCAGTTGAATCCCCTGAAGACAGGG GAGAAAGATGACAATGACTTCACATGTGGCCCTTCTGTCTCAGTGGAGCCCTTTGGTTCAAGGGATACTTCAGGATCTAAAACTGATTTATTGTCAGAAA GCCTATTTCATCCCCAGCTTTTGAGGTTGGAATCCAGATCTCAAGAGGATAGCTCCTGTCCTGCCGATGGTAGAGGGGTGAATATAACTGAAAAGCATAA CCAAATTGGTCAAGTAAAGTGTTTTACCAAGGTTTTGTCTCAAAACAGAGAAATGATGGAGGGTTCCTGGCTAGACAAAATAATATGGGAGGAGCTTGAT AAACCTATTATAAAACCGAAGCTTATCTTTGATCTTCAGGATGATCAAATGCACTTTGAAGTTTTGGATAGCAAGGACACTAGACATCTTCGCCTTCATG CTGGGGCTATTATTTTAACCCGTTCCCTAAAATCGAACAGTGGGGACTCTTCTGAGCTACCTGGACATGGAGGTCAGCATGGATGGCGAAGTGTTGCTAA TGACAAACACTACTCAAACAGGAAAACTTCTCAGCAACTGAAATCAAATTCTAAAAAACGCTCGGCTCATGGGGTCAAAGTTTTTCACTCACAACCTGCA CTGAAGCTGCAGACGATGAAGTTGAAGTTGAGCAATAAAGATATTGCAAATTTTCACCGGCCGAAAGCATTATGGTATCCCCATGACAATGAGATGGCTG TCAAAGAACAAGGGAAGTTGGCAACACAAGGACCCATGAAGATTATTATGAAGAGCTTGGGCGGCAAAGGGTGTAAACTGCATGTTGATGCCGAAGAAAC TCTCTCATCTGTTATAGTAAAAGCTTCTAAAAAGCTAGATTTCAAGGCATCCGAGACAGTGAAAATATTTTACTCAGGGAGGGAGCTTGAAGATTACAAA TCACTTGCTGCACAAAATGTTCAACCAAACTCCTTGTTACATCTTGTCCGTACAAAGATACATTTGTGGCCAAGGGCACAAAGGGTTCCTGGTGAGAATA AGTCTTTACGTCCTCCAGGGGCATTCAAGAAAAAGTCTGATCTGTCAGTGAAAGACGGACATGTTTTTTTGATGGAGTATTGTGAGGAAAGGCCTTTACT TTTGAGTAATGTTGGAATGGGTGCAAGACTTTGTACTTACTATCAAAAATGTTCACCAGATGACCAATCTGGCTCCTTATTACGTAACACAAATAGTAGC TTGGGGCACATTATTTCTCTGGATCCTGCTGATAAATCTCCCTTCCTCGGTGATATAAAACCTGGTTGTAGTCAGTCATCACTCGAGACAAATATGTACA GAGCACCCTTATTTCCTCATAAAGTTCCGTTAACTGACTACCTGCTGGTTCGTTCATCAAAGGGAAAACTATCTTTAAGGCGCATCGATAAAGTTAATGT TGTTGGACAGCAGGAGCCTCTCATGGAGGTATTATCACCTGGAAGTAAGAATCTTCAGACTTATATGATGAACAGGCTATTGGTGTACATGTGCCGTGAA TTCCAAGCTGCAGAGAAGCGGCATTTACCTCCATACATTCGTATTGATGAGTTCTTGTCACAGTTTCCTTACCTTTCAGAAGCGTCTTTCCGCAAGAGAA TCAAGGAATATGCCAATTTACAGAGGGGATCGAATGGACAATCAATTTTAGTTAAAAAGCGGAACTTTCGCATGTGGTCAGAAGATGAATTAAGAAAAAT GGTGACACCAGAGCTTGTTTGTGCCTATGAAAGCATGCAAGCTGGCCTGTATCGTCTAAAACATTTAGGAATAACTGAAACACACCCTACTCATATTTCT TCTGCAATGAGTCGGCTTCCTGATGAAGCAATAGCACTGGCTGCTGCATCACACATTGAGAGGGAGCTACAAATTACTCCTTGGAACTTGAGTAGCAATT TTGTTGCCTGTACAAGCCAGGGTAAGGAAAATATTGAGCGAATGGAAATTACTGGTGTTGGTGATCCATCTGGCCGTGGCATGGGTTTCAGCTATGCACG GGCACCTCCAAAGGCACCAGTGTCTAGTGCAATGGTGAAGAAGAAAGCTCCTGCTAATCGGGGAGGTTCCACTGTCACTGGTACAGATGCTGATCTACGT AGACTAAGCATGGAGGCTGCACGAGAGGTTCTTCTTAAGTTCAATGTTCCAGAGGAGGTCATTGCAAAACAAACCAGATGGCATCGCATTGCTATGATAC GCAAACTTTCAAGTGAGCAAGCTGCATCTGGGGTTAAGGTTGATCCGTCAACTATCAGCAAATATGCTCGTGGGCAGCGGATGTCCTTTCTTCAGTTACA GCAGCAGACTAGAGAGAAGTGCCAGGAGATTTGGGATCGACAAATCCAGACTTTGTCAGCTATAAATTATGATGAAGATGAGAGTGAGTCAGAAGGAAAT AGTGATCTAGACTCTTTTGCTGGAGATTTGGAAAATTTACTTGATGCTGAGGAGTTTGAGGAGGGTGAAGAGGGTACTAATGACTCAAAACGTGATAAGG GGGATGGTGTTAAGGGTCTTAAAATGAGAAGACGTGCAACTTCTGCCCAGGCAGAAGAGGAAATAGAAGACGAGGCAGCTGAGGCTGCTGAATTACGCAG GTTGCTTATGGATGATGATGAAGCTGACCGGAAGAAAAAGAAGAAAGCTAGAGTTGTGGTGGAAGAAGCAAGATTGGTACCAAAGCTACAATCAAAATTC ATATTTGACAACAATGAAAAAGTTAACCAAATATCAAATACTTTGCAACTAGATGCTACTAAACATTGGAAAGAGGATATAATTACAGATCTCAGGGAGG AGGAAATTTTTTCTTCTAAAAAAAGCAAATCAGTGAAGGTCAGTAAGGCAAAGAAGAATGACGCTGCACCTATCAGTCTACCCAATAAAAAGATTAAATT AAATATGGGAGAACCAATCAAGGTATTTAAAGAGAAAAAACCATCAAGGGAAACTTTTGTTTGTGGAGCATGTGGCCAGCTTGGACACATGAGAACAAAC AAGAACTGTCCAAAATATGGTGAAGACGTTGAAGCACAGCTTGAATCTACAGACATGGAAAAATCATCTGGAAAAGTGGATCCCTCTAGTCATTCCCAGC GTAAAGCCCTTTTCAGAATGTCCATATCAAATAGCACTACAAGAATTGCTCCTGTTGACAATTCAACTAAAATTCCAGTGAAGTTCAAATGCAGCTCCAC TGAGAAATCTTATGATAAACCTGCAATTGAGACCCTGCGAAGTTCTGACAAGCCAGTTACTTCTGACTCTGAAACTGCCAAGCCTGCTAAGGTCAATAAG ATAATTTTTCCCAAGATAGTGAAACCAGATGATGCGCAGGCTGAATCTCTAACGTCTGGTATTGTTATACGGCCTCCTACTGATTCAGGTAGAGGTCAGA TTGATTCTCATAAGCTCCCAATTAAAATACCACAACCACCAGCAGAAGTAGATAGGGAGCGATCACACAAGAAGAAGATTATTATAAAACGCTCAAAGGA AGATTATTATAAAAATGATCAGGACCTCGACAGTCCTGGTGGAAACACAGGATTTGAACACCGGAAAACTAAAAGAATTGTTGAATTATCAAATCTTGAG ATGCATAGAAATCAGGAGACAATGTATTCAACTGAAGGTTTGGTAAAATGGAAAGGTAAAGAGGATAGAAGATGGTGGGAAGGGCAAGAGAAACAGAAAA ATGAAGCTAGACTCAGAGAAGACTGGGTAAGGAGACATCACAAAGAATTTAAGATTCCCAAAGAACAAAAACTAGATGAGATTAGAAGATATGAAGAAGA TATTAGAATGGAGAGGGAGGAGGAAGAACAACAAAAGGCAAAGAAGAAAAAGAAGAAAAAGCTCGAGTTAGGAGATGACTACTTAGATGGTCCCAGAACA AGACATGATAAGAGGATGCTAGAAAGGAGCGGAAAAAGGAGACATGTTGAGTTAGGCAAGGGTGGTGCAGATTATATGCAGCCAATAAAACGCCGAAGAG GGGGAGGGGGAGAGGTTGAGTTGGCAAACATTTTGGAAAGCATTGTGGACTCCATTGTGAAAGATAGGAACGATCTGTGCTATCTTTTCCTGAAACCGGT GTCGAAGAAAGTGGCACCTGACTACCTTGACATTATAGAGAGGCCTATGGATCTTTCCAGAATCAGGGAGAGGGCAAGAAATATGGAGTACAAGAGCCGT GAAGATTTCAGACATGATATGTGGCAGATTACTTATAATGCTCATAAATATAACAATGGCCGTAATCCAGGAATTCCTCCCATTGCAGATATGCTTTTGA AACATTGTGATTATTTGTTGAATGAGAATGATGATAACCTCACTACAGCTGAAGCTGGTATTCAAATTAGTCACTTTTAAGTGATTAAATTCAGAACTCA TTCTGGAGGTTTTGTACAAATGTTTTAATTGATTTTGGAATGGTTTTAATTTAAGTGCAAGATAGGGTTGCAATTTGCATGGAAATGAGGTTGTAGTATC GTCAATTTTTCTCCTTAAACAAGTATATTCTAGATTGGATAGTAGATGGTTACAAAAATAAAAACATGTTTTGTTTCATTTAATGATGAAATGCCCTCAA ATATAAACCGTTATATGTGTCGAGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_193872; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_505001
| Blastp | Transcription initiation factor TFIID subunit 1 from Arabidopsis with 51.09% of identity |
|---|---|
| Blastx | Transcription initiation factor TFIID subunit 1 from Arabidopsis with 50.32% of identity |
| Eggnog | bromodomain(COG5076) |
| Kegg | Link to kegg annotations (AT1G32750) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445198.1) |
| Pfam | Protein of unknown function (DUF3591) (PF12157.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |