| Id Trinity | TRINITY_DN52579_c1_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_504996 |
| Sequence | TAAAAGTCAATACAGTTATTATCAGAACATGACCATGATTCCTTGTTCTCTAAAGAGTCTTGAAGGACACAAATAATTTGAAAGATCGTACGAAAGAAAC TTACTGTATCAATAATCACTACCACCAACATTGCGAGGGGACTCCCTTCTGGATTAATGCAAATGCTACAGAAGTAATTGCTATTTAGATTTTCAATTAT TTACCTTGCTACAAAAAGTTTGGCATTATACAGATTCAAGTGATTCATACATTACATCCTGCAGGTGGAATAGATCTTGTTCTATGGAGTCGCAAATCAA ACTGCTACTTTTAGTTTTTGGTCCAGAAGCAGAAATCTCCTTCCCTAATGCCTTTAAAGCTTCTGGATAGAATGGTGTGACTAGTTTCTCTTAGGCCATT GTGATGAATGCACTGCTTGTTTATTCTCAGCAGAGCAAAGAAACATGTAACTACTAGTTATAACTTTGTTTAAGCACGAGATCCTATGAAAAGGGCAAGA TGATTTTCCATCTCAAACATCACAAACTAACTACAATACCTGTAAGCAACTCATACCAACTTTTAAGATGTTATTTCTTTCTTCAATCTAATCTTGATGC TGGTTATTATTTGTACCATACCTACTAGTGTCTTATAATTTTAAAAATCATAGTTTGTATTTTATGTTGGTTTTGTGTGTCTAATGCTCTTGCACACATG ATTCCTAAGTAAGGACAGTTTCGGTGACTTTAGCAATTGGTAACCATGTCAGTCACACAGAAGATAAACAAACTCCAGAATGATGCCACTAGAATTCAAC TATGGCTAAGATGGGTACCTACTATTTCCTGCTGAAATTAAAGCAAATAAGTATGCAAGGTAACATAAATGACAAACTAGTACAAGAAAAGGACAGAAAC AGAACAATAACAAATGGATGCAGAGCTCCACCGTTTTGAAACTACCCAACTCCATCAAAACTTGTGAGGAAAAACAAGGCCCATCGGAAAATCCTTCATT CACCATTAGGTGAAGCAATGGAAGTGTAAAGTATATAAAGTGTAAAGGTATATGAGTAGTGTTATTTGTAATGTTTAAGATTGACAAATTTTCTTGCAAT AAATGAATTTATATCTTTATCTCACCAACTATAAACACCTAAAAATTTAGAAGCTTTATGAGGCAATAGTTTAGAAGACTCAGAATCAAAGCCGTTATTC TCAAGTTTCTGATACTGAACATATTCTTCATTTTCATCTTGATACATAACCTCTTCCACATTCTCTCTTTTCTCCACACCATAACACTCCCTGGGCTTCT CCTCCGCCTGCCACACGTTCCGGTGCGTCGTGAAGATCTCCACCATTCTTGCATCCGCCTTCGATACATTGTCTCCCTCAGCTCCTCTTCCACAATGCAG AGCTTCATATTGAAGTTGTTTGGTAAGAGTGACAGGAAGACAGAGAAGGTAAAGTAAAGGAGTTTGGCCCAGAGTTAAATAAAAGCGTGCAGCAACAACA GCATAGCCCCTTCAACGAATGATCTCGCTATTAAATAATCGGGGTGCATCATCGATTAGCGCTCGCTAACTACTCTTTCCGATCAACATCACCGCCGACT CCAATCTTCCTCGCCGGAAACCCTATCTTTCACGGTTCTGCTTCTGATCACCACTCGCTCAGAGGGGAAAGCATAACTGCGTTCTTGTTTTGCTCCAAAT TCAATATCATCGGGAAAAAAGTGGCGATACCGGAGGTCTAGGGTTCCGGTAGAATTCTCTGAAGGTTTGACTGTCCGAGCTCTGATTGGTTCATAATTAC CTGATTGAGATAATTTGGAGGGAAATTTGCAAGGGTTCGTCGCCGACGGTGAGGGGAGGAAAACCTAATTTCTGTAATTTGGCCTTTCTTCTTCGGGGGA ATTTCGGAGTGAAACAGCGCCTGCGAAGTTAGAATTTGAGGGTTTTAATTGGGCACAGAAGGCGTAATAAGAAGATATTAATTGGAGTCCAGTGCTGTAG CTGTGCTTTGATGAGTTATTGATTCTTGCATTGAATTGTGATATCAGTTCTGCCACACAACATGGGGTACCATTCGGATAATTCACAAGACGGGAGGGAA GAAGATGATGAAGAAGAATATGAGGAGAATGGCAAGGGTAATCGTTTTCTTGGGTTCATGTTTGGAAATGTTGATAACTCTGGTGATCTTGATGTTGATT ACCTTGACGAGGATGCAAAGGAGCATCTATCTGCATTGGCTGACAAGCTGGGCCCATCACTGACAGATATAGATTTGTCAGGAAAATCACCTCAAACACC ACCCGATGTTGTTGAACAAGACTGTGGTGAAAAAGCCGAAGATGCGGTTGATTATGAAGATATTGATGAAGAGTATGATGGTCCAGAGACTGAAGCTGCC AACGAGGAGATGTATTTATTGCCAAATAAGGAATTCTTCTCTGCTGAAGCCTCTCTTGAAGTTTTGGAGTCCAGAGCTTCTGTCTTTGATGATGAAAATT ATGACGAGGAATCTGAACAGGAACAAGACTTGGTGAATGATAATTCTAAAATTGATGGTATATCTTTAGCTGGGGAACAGGAAAAGAATTCTATAGATGC GTCTAAAGGAGAGAGTGCCCAGGAACATGATCTACAAGTTGGCTTACTGCAGACCGAAGAATTGGACACTGAAATACAAAAACTTGAGGAGGAAGGGTCT GAAGTTCTGAAAAGATTTACACCATTGCCCGTTTTGTGTGTGGAAGATGGGGTAACTATTTTACGTTTCTCTGAAATCTTCAGTATTCATGAACCTCGGA GAAGGGAAGAAAAGAGAGAGTATCGTCATTCTATTCCCAGAGAAAGGTACAACTCTTTCAATTTTTCTGATGATACTGTTGAAGAGGATGAAGAAGCATT CCTCAGGGGCTTCTCCCGGAGTCTCTTACTTACTGAACAGGTTTGTGTTGTTCATAATGATGTATCAGAAAACAATTATGTTGACTTGGACATTCCAAAA TTTGGGTTTCTTCATGGGGATGCCTCGTTGGCTGTGAAAGATGATCGGCAACGGAAGGATTGTTGTCTTAGTGCTGAACCAATGAAAGAGGATATAGAAG AAGATCTTTCCCAGAAAAATGATTCTTTCATATGGGCGAACTTTTACCCTCTTGATCAGCAAGATTGGGAAGATGAAATCCTTTGGGGCAATTCTCCTGC TGCAGGTGATAATATTGTTGAGAGCTGTGAAATTTTTGGACCTGAATTGGGAGACTCTGGTGGCAATAAAATAGAAATCGAAAGTGAGAAAAATCTTCAG TTTGAAACCCAGAAGATGATGTGGGAGAAAGATCATAATGTCTTCACATGTGGCTCCTCTCTCTTGTTGGAGCCCTTTGGTTCAAGGGATCCTTTGGGAT CTAAAACCAATTTATCGTCAGAAAGTCTATTTCATCCTCAACTTCTGAGGTTAGAATCCAGATCTCAAGAGGATAGCTCTTGTCCTGCAGATGGTAGAGC GGGGAATATATCTGAAAAGCATAACCAAATTGGTCAAGTAAAGCGTTTTACTAAGATTTTGTCTCAAAACAGAGAAATGATGGAGGGGTCCTGGTTAGAC AAGATAATATGGGAGGAACTTCATGAACCTACTGTGAAACCAAAGCTTATCTTTGATCTTCAGGATGATCAAATGCACTTTGAAGTTTTGGATAGCAAGC ACTGTAAACATCTTCGCCTTCAAGCTGGGGCTATTATTTTAACCCATTTCTTAAAATCCAGCAGTGGGGACTCTTCTGAGATACCAGGTCATGGAGGTCA GCATGGATGGCGAAATGTTGCTAATGACAAACACTATTCGAACAGGAAAACTTCTCAGCAACTGAAATCTAATTCTAAAAAACGCTCAGCTCATGGTATC AAAGTTTTTCACTCACAACCTGCACTGAAGTTGCAGACGATGAAATTGAAGTTGAGCAATAAAGATATTGCTAATTTTCACCGGCCCAAAGCATTATGGT ATCCCCATGACAATGAGGTGACTGTCAAAGAACAGGGAAAATTGTCAACACGAGGGCCAATGAAAATTATCCTGAAGAGCTTGGGTGGCCAAGGATGTAA ACAGCATGTTGATGCTGAAGAAACTCTCTCTTCTGTTATAGAAAGAGCTTCTAAAAAGATAGATCTCAAAGCATCAGAGACATTCAAAATATTTTACTTA GGGAGGGAGCTTGAAGGTAACAAATCATTTGCTGCACAAAATGTTCAACCAAACTCCTTGTTACATCTTGTCCGTACAAAGATACATTTGTGGCCAAGGG CACAAAGGGTTCCTGGTGAGAATAAGTCTTTGCGTCCCCCAGGGGCATTCAAGAAAAAGTCTGATTTGTCGGTGAAAGACGGACATGTTTTTCTGATGGA GTATTGTGAGGAAAGGCCTTTACTTTTGAGCAATGTTGGAATGGGCGCAAGACTTTGTACATACCATCAAAAATGTTCACCTGACAACCAATCTTGCTCC TTAGTACGCAACATAAATAGCAGCTCGGGACACATTATTTCTTTGGATCCTTCTGATAAATCTCCTTTCCTTGGTGATTTAAAACCTGGTTGTAGTCAGT CATCACTTGAGACAAATATGTACAGAGCACCGATATTTCCTCATAAAGTTCCGTTAACTGACTACCTGCTGGTTCGTTCATCAAAGGGAAAGCTATCATT GCGGCGCATTGATAAACTTAATGTTGTTGGGCAGCAGGAGCCTCTCATGGAGGTATTATCACCTGGAAGTAAGAATCTTCAGACCTACACAATGAACAGG CTATTGGTACACATGTGCCGTGAATTCCAAGTAGCAGAGAAGCAACACTTACCTCCATACATTCGTACTGATGAGTTCCTGTCACATTTTCCTTACCTTT CAGAAGCCTCTCTCCGCAAGAGAATCAAGGAATATGCCTATTTACAGAGAGGAACAAGTGGACAGACAATTTTAGTTAAAAAGCGGAACTTTCGCATGTG GTCAGAAGATGAATTAAGAAAAATGGTGACACCAGAGCTTGTTTGTGCCTATGAAAGCATGCAGGCTGGTCTGTATCGTCTAAAACATTTAGGAATAACT GAAACACACCCTACTCATATTTCTTCTGCAATGAGTCGGCTTCCTGATGAAGCAATAGCACTGGCTGCTGCATCACACATTGAGAGGGAACTACAAATTA CTCCGTGGAACTTGAGTAGCAATTTTGTTGCCTGTACAAGCCAGGGTAAGGAAAATATTGAACGGATGGAAATTACTGGCGTTGGTGATCCGTCTGGCCG TGGCATGGGTTTTAGCTATGCTCGAGTACCTCCAAAGGCACCAGTGTCTAGTGCAATGGTGAAGAGGAAAGCACCTACTAATCGAGGAGGTTCCACAGTC ACTGGTACAGATGCTGATCTACGGAGATTAAGCATGGAGGCTGCTCGAGAGGTTCTTCTTAAATTCAATGTTCCAGGGGAGATCATTTCAAAACAAACCA GGTGGCATCGCATTGCGATGATACGCAAACTTTCAAGTGAGCAAGCTGCATCTGGGGTTAAGGTTGATCCAACAACTATCAGCAAATATGCTCGTGGGCA GCGGATGTCCTTTCTTCAGTTACAGCAGCAGACCAGGGAGAAGTGCCAGGAGATTTGGGATCGACAAATCCAGAGTTTGTCAGATATAAATGGCGATGAA AATGAGAGTGATTCAGAAGGGAATAGTGATCTAGATTCCTTTGCTGGAGATCTGGAAAATTTACTTGATGCTGAGGAGTGTGAAGAGGGTGAAGAGGGTA CGAATGACTCAAAGCGTGATAAGGGGGATGGTGTTAAGGGACTTAAAATGAGAAGACGCCCAACTTTAGCCCAGGCAGAAGAGGAAAAAGAAGATGAAGC AACCGAGGCTTCTGAATTATGCAGGTTGCTCATGGATGGTATGATATTTTATTGGTCGTTGTTTAAGTATTATTTCCTTACCTTGGTACTGAAAGTGGGG ACATTGATCTTGCTAGGGCTGTTATGATGTAATGACCAGTGGTTAACAGGATCACTATTTTAAAACTGAACTAAAAGATGCTACTTGTCAGATTTGGCTA TTTTATGGGCAATATTTTATACAGATGATGAAGCTGATAGGAAGAAAAAGAAGAAAGCTAGAGTTGTGGTGGAAGAAGCAAGATTGGTACCAAAGCTGCA ATCAAAATACATCTTTGACAACACTGAAAAATTTAACCAAATAAAAAATACTTTGCAACTAGATGATACTAATCATTGGAAAGGGGATACGATTACAGAT CTTGGGGAGGGGGGGAAATTTTCTGCTAAAAAAAGCACTTCAGTGAAGGTCAACAAGGCAAAGAAGAATGTTATCCCACCTATTAGTCTACCCAGTAAAA AAATTAAACTAAATATGGGGGAACCAATCAAGGTATTTAAGGAGAAAAAACCATCCAGGGAAACTTTTGTTTGTGGAGCATGTGGCCAGCTTGGACACAT GAGAACAAACAAGAACTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_193872; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_504996
| Blastp | Transcription initiation factor TFIID subunit 1 from Arabidopsis with 57.99% of identity |
|---|---|
| Blastx | Transcription initiation factor TFIID subunit 1 from Arabidopsis with 57.84% of identity |
| Eggnog | bromodomain(COG5076) |
| Kegg | Link to kegg annotations (AT1G32750) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421079.1) |
| Pfam | TATA box-binding protein binding (PF09247.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |