| Id Trinity | TRINITY_DN52580_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_505941 |
| Sequence | TGCTGCCGGTGGAACACTTCTATCTTTTATGGACTCAGAAACAATGCTCTCTTTTGCCGGTCATGGTTTCCGGTCACCGGTCATCTTAAGTAAAATCTCT TAACCTGTTATTGTTTAATTTCTTTTGTTAGAAGAAAATGATGGAATAACAGTGAATTTTAATTTAATCTATAAAGATTATGGTTAATAATGGTGAATGG TGAATGAGAAATAATATGAAGAAGCTTAGATAAATTGGATGCTTGATTGAAGTTATTGGTGTTGCTTTGTGAATGAGGAACATTTTTGGAAACAAGTTTA GGGTTTTGTTTTGTTGGTGCTTTAGGTTTTTACGGTTTCGAAATTTTGCGAACTTTAACTCAGCTAAATCAAGTCTCTCTAATGGAAATGAGAGATGAAG CAATGTGTAGAGTGAATAGCCAAATGGATTTGTGAAAGATGTGACCAGCTTAACATTATTCATTGATGGAAGAGAAATGCTCATGTGGAGTATTCAGATC TTTTCGGGACTGTAATTTGACTATATTTATTCAAAAAGTAACTGACTGAAATTGCGGAGACTTGGCTTTCGCGATACACATGCCGGTTTTTTATCCAGGA AAAATGGGTTCAGGGGTGCAGTCTAGTCTCTAGTATTTTCTCAGATTACTATTTTCTTCATGCTGAATGAAATTTGCATTGTATTTATACGTTGGCGACC TGCTGGTTTACTAATGGAACAGTTAACAGGCAATAGAAGCTTAAGCTCCACAAAAATAGTAATATCTGTATTTACAGGATTCCTTTGTTTATTTTTGTCT CTTTAAAATCTCTGCTCTGAGATGATTGGTCAGATGTTATTTGTTCATTCTGATGAATGGATAAAATGCTCCTTCCTTTTGCTTGTCCTTTATTTCCTTG GTTTTCAACCCTGCCCTCCTTTCTTATTGGTATGCATGACTATTTTATTCCATGTAATTGTGCTGCTTTCCTTTTACATTTCACTCACGTTATTTCCGCT TTTGCTCTTTCAGAGGCATTCTTATCATCATTCATGGGCTTAACGAACATGGTGGAAGATATGCTGATTTCGCAAGGCAGTTAACATCATGCCACTTTGG TGTTTATGCAATGGACTGGATAGGTCATGGAGGGAGTGATGGTTTGCATGGTTATGTTCCTTCTCTTGATCATGTCGTTGCAGACACCGGAGCTTTCTTG GAAAAGGTTAGATCAGAGAATCCAGGGATACCATGCTTTCTCTTTGGTCACTCTACTGGAGGGGCTGTGGTTTTGAAAGCAGCTTCCCTCCCTCATATTG AAGTAATGGTGGAAGGAATTATACTAACCTCACCTGCTTTGCGAGTCAAGCCAGCTCATCCAATTGTTGGTGTAAGTTGTAGGCTGTGCATTATGTGCGC AATTAATGTGTTTATAATTAGTTTCTAAAATTGCTCACTACAAAAACGCATTGCCATATACAAAGTTTTCATGAAAGTAACAGAACCACCCACTCACGTT CCCTTTTTCAACCTCTCCCCTTTCTCTTTCATATCTGCAGAAGATAATGATGAGCGTATGATCTAAACATAAATATCTTATCTTCTTAACCTGGGACATC ATCTGTTTTCAACTGAGTAATCAAACTATAGCCAATGTGATATGAGCTATAGCTACATATAGTATATGACGGATTTGAGTTTTCTCACTTGAAGCAGAAT GAGTGACATAATACATCAAAAGTCAAGGCCTTTTAATTCACCATCATATTGTAGTAAGCGCATAAAGAGTGACTGGTTTATTCTTTTTGATTAATATTTT GCCACCATTTCCTCTGCAGTCTGCACCCACTTCTCTGATTTCAGAACACCTTCTCATATTTACTCTCATCGACTCTCTCCTTTATATTTAAGCATTGATC ATGTTCTTCTGTAGAGAGTTTGGGAAAATCCTAGTTGAAACTGTATAAATAATAGCAATCACTCTACTCTCAATCCATTTCTAAAATTAAAATGTCATGA TTATAATATTATCTTGCATTATGTTTATAAATATGGACTATTCTTTGCATGTGTTTCATGTGTTAAAAAGGATCTGTTTGATGTGTTGATGCAGGCTGTT GCTCCAATTTTTTCTCTAGTAGCTCCAAGGTTCCAATTTAAAGGAGCAAACAAAAGAGGAATTCCAGTTTCGAGGGACCCAGAGGCTTTGTTGGCAAAGT ACTCTGATCCTTTGGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_193879; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_505941
| Blastp | Caffeoylshikimate esterase from Arabidopsis with 44.64% of identity |
|---|---|
| Blastx | Monoglyceride lipase from Homo with 34.11% of identity |
| Eggnog | alpha beta hydrolase fold(COG2267) |
| Kegg | Link to kegg annotations (AT1G52760) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417940.1) |
| Pfam | Serine aminopeptidase, S33 (PF12146.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |