Id Trinity | TRINITY_DN52581_c1_g1_i16 |
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Name Transcript | Ll_transcript_506494 |
Sequence | GTTTTCACCTCTCCCTTCAACACCGTATACGTATTCTCGTCAATATACGTATGCATACGTTCGCTCACTCACCCACTTCGTTACCTACGTTTCAGTATTC TTTAAAAACCGCCAAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTCTCAATAATTTGGTTACTCACTCACTCACCAGAAAACA AAAAAATAATATTAATATTATTTTTAAGAATCAGATCTGAAAAACCGCAACCAAACCCTAACACATACCTATAGGGTTTATCCGAAGCTGAACCTCGATT TCATTATAGGGTTACGTTTCTTTCACCGAACCTAGGGTTTCAATTTATATGCGATGGAATGTTTCGTTTATTTTTATCGTAATCTATTCTTAACAACATG ACCGTTATGTTTTTCGAAAGTGATTGTGGTCGTACGTAGGGAATGTCAGTTCCGGTTGATTTTCCGGTGACCGCCGTACCGGAGATTTCTGAGCAATTCG GTGCTGCTGTTGAAATTGATTACTTTACACAGGCGAGAAAGGCGCTTAGTGAGCGGTGTCCTTTCGACGATAAAGATGAGAATTGGAGTCTCACAAAAGC TACCCTGCCTAGTGGTCTGGCTGCCTTGTTGAACCAAGGCTCGGATAACCGTAAGAAGCGCCGGAAGAAGCCACCTTCTGGTGTGGAGAAGGAAAAGTTA AGTGGTGGTTGTGGTTCGAACATTTGGACTGAAACTGAAGGGTACTTCAGGGATTTGACATTGGCTGATATTGATACCTTGTTGGAGTTATCGTCTTTGC CTTGTAGCTTAGTTGATAGTGAGTGTTTTTCCATTCCATTTATTACTGAGAATGAAAATGGGAATGGTCAAAATGCAGACAAGGTGGTTGTGAAAAATGA GGATGTTTTTTTTGGAGTTGACAGTGTTAGTGACAAAGTTGATAGTGTTAATGACAAAGTTGATAGTGTTAATGACAAAGATCATGCTACTTATGATAGT CCTGGATGTGCTGTTAGTTTAGAGTGGCTTTTAGGTTGTAGGAATAAGGCATATCTAACTTCTGAGCGCAAATCAAAGAAAAGGAAGCATTTGGGTGGTG GTGTTGGGTTGGAGAAATTTTTATTTACTATCCCTAGTGATGGGAACTTATCTTATTGTCATTATTGTGGCCGGGGAGATTTGGGTTTAGAGTCTAACCG GCTACTTGTCTGTGGTTCTTGTAAAGTCGCGGTTCATAGGAAGTGCTATGGTGTGTTGGGTGATGTGCATTGTGCGTCTTGGTTTTGCTCATGGTGTGAG CAAAAAGATGAAGTAAGTGGAATGGCGAATCCTTGTGTTCTTTGTCCCAACAAGGGCGGGGCTTTGAAACCTGTTAGTAGAAGTGGGGAAGGTGTTGAGT GGGTCCAGTTTGCTCATTTATTTTGTTGCCTGTGGACGCCTGAAGTTTATGTGGATGATTTGAAGAAGATGGAGCCTATTGCGAATTTGGATCAGATTGA GGAAAGCAGGAGAAAATTAGTATGTAATGTTTGCAAGGTGAAGTCTGGTGCATGTGTTCGGTGTAGCAATGGGTCCTGCCGGATTTCTTTCCATCCTTTA TGTGCAAGGCAAGCTAGACAAAGAATGGAGGTTTGGGCGAAGGATTGTTCCGATAATGTTGAGTTGCGGGCTTTTTGCTATAAGCACTCAGATCGACAAG AGAACAGCAGCATCTTACCCTCAGAAGATTCAGTTGCTGTTGGAAGTGAATTTTCCGATGCCAACGGCCTTCAAGTGAGATTGCCAGTGAACAATGAAAA CAATTTAAAACGTGGTCGCAGGAACGAAGATAACATTGTGATAATTTCCGATGATAGTCCATACAACTTGAGCCTCAATGAACCAGAAGATGGTGGGTTG TCTAATATTCGGTTAAATACTCACAGCATATCTGGGTGTAATGTTGATCAGCAATTGTATAATACTGAGACGGTGGGTAGGACTAGTGAGAATGCTAATG CATCCGATACCCTCAAATATGCACTTGTTTGGAAGAAGTTGATAGAGAAAGGGAAAATTGATGTGAAAGATGTAGCTCTGCAGATTGGCATTACTCCAGA GGCACTAACTCCAAATATATATGAGGCTTGCATGTCCCCTGATGTGCGACTCAAAATAGTCAATTGGTTAAAAGCCCATGTATATACTAATGCAATGCAT AAAGGTACGAAAGTCAAATTCAAATCAAACAATTCATCCAAGGATGAACAGGGAGCAACTGATGATTCAGATGCTTCACTGATATCAGATCCAGGTTTTC TGGATCTGGCCAGTTTTAAGTCTGTACCAAGAAGGAGAATAACTGTCAGCAGCAGAAGGATTTTGAAGGATAATGAAATGATATGTTCACCTGAGGCCGT TTCTAGTGAGAATGGGTTGCCATTGCACAAGTTAATTGTACGCGAACCTAACTCTGAAAGTCCAGGAACCTTCAATAAAGCATCCATTCCTGATGTAACT GAAAAGGTAGTTTTCTTGTGTGTTAGTTATTTTCCTTTGCCACCTTGGGTCAAATATTCTTAGATATTTTCCTTTGCCACCTTGAATAATAAAGGCACCA AAATTTGTTTTGGGAGTTTGTATGTGTAGGCTGTTTTACTTTCCCCTCCTTGAAGTCCAAAATCTGATTGATGACTTTAACCATGTCTGAGGATAGTTCA CCTGAAATTCAAGGCAAGGCTCATAAAACCAGCAAAATCAGCTTAACTGAATGCATGTCACATGAGAAGTTGACTTTATGTTTGCCGAGAGCTTTTGTGC TTTCTGAGCAGCACCTTCCTGTTTGTTCTAATTCAGAAGTACCTGATTCTGATACTCGGGTGCTTTCAAAGGATAATATATGTCCAAGGCTGGAGGGAAA TTATTCTTTGGTTGAATCCTTGTGGGCCAGTGGCCATTCAACTAAGCAGTGTCAGCGTTTAACTTGCCTTGATGATTGCAAGTCTGATCAAGTGAATATG AAGCAGTTGGTTAGGGCTAGGGAAATGTGCGTTTTAGAAAATTCTCCACAAGATGAAGTGGAGGGGGAGCTTCTATATTTTCAGCATAGGTTATTGCAGA ATGCAGCTAGAAGAAGGCAGATATCTGATAACTTAATCTTCAGTGTTACCAAGAGTTTGCCGCGGGAAATTGATATTGCGCATCAGCGAAGGTGGGATGC TGTGCTTGTTAATCAATATATGTTTGATCTTAGAGAGGCAAAAAAGAGGGGCAGAAAAGAGAGAAAGCACAAGGAAGCACAAGCAGTTCTAGCTGCTGCA ACTGCTGCTGCTGCATCTCCTAGGGTTTCTTCACTCCGGAAAGACTCTTTAT BLAST |
Tissue | pods |
Gene name | LI_gene_193890; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_506494
Blastp | Histone-lysine N-methyltransferase ATX1 from Arabidopsis with 31.21% of identity |
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Blastx | Histone-lysine N-methyltransferase ATX1 from Arabidopsis with 31.21% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (AT2G31650) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430724.1) |
Pfam | PHD-finger (PF13831.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |