| Id Trinity | TRINITY_DN52581_c1_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_506499 |
| Sequence | GTTTTCACCTCTCCCTTCAACACCGTATACGTATTCTCGTCAATATACGTATGCATACGTTCGCTCACTCACCCACTTCGTTACCTACGTTTCAGTATTC TTTAAAAACCGCCAAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTCTCAATAATTTGGTTACTCACTCACTCACCAGAAAACA AAAAAATAATATTAATATTATTTTTAAGAATCAGATCTGAAAAACCGCAACCAAACCCTAACACATACCTATAGGGTTTATCCGAAGCTGAACCTCGATT TCATTATAGGGTTACGTTTCTTTCACCGAACCTAGGGTTTCAATTTATATGCGATGGAATGTTTCGTTTATTTTTATCGTAATCTATTCTTAACAACATG ACCGTTATGTTTTTCGAAAGTGATTGTGGTCGTACGTAGGGAATGTCAGTTCCGGTTGATTTTCCGGTGACCGCCGTACCGGAGATTTCTGAGCAATTCG GTGCTGCTGTTGAAATTGATTACTTTACACAGGCGAGAAAGGCGCTTAGTGAGCGGTGTCCTTTCGACGATAAAGATGAGAATTGGAGTCTCACAAAAGC TACCCTGCCTAGTGGTCTGGCTGCCTTGTTGAACCAAGGCTCGGATAACCGTAAGAAGCGCCGGAAGAAGCCACCTTCTGGTGTGGAGAAGGAAAAGTTA AGTGGTGGTTGTGGTTCGAACATTTGGACTGAAACTGAAGGGTACTTCAGGGATTTGACATTGGCTGATATTGATACCTTGTTGGAGTTATCGTCTTTGC CTTGTAGCTTAGTTGATAGTGAGTGTTTTTCCATTCCATTTATTACTGAGAATGAAAATGGGAATGGTCAAAATGCAGACAAGGTGGTTGTGAAAAATGA GGATGTTTTTTTTGGAGTTGACAGTGTTAGTGACAAAGTTGATAGTGTTAATGACAAAGTTGATAGTGTTAATGACAAAGATCATGCTACTTATGATAGT CCTGGATGTGCTGTTAGTTTAGAGTGGCTTTTAGGTTGTAGGAATAAGGCATATCTAACTTCTGAGCGCAAATCAAAGAAAAGGAAGCATTTGGGTGGTG GTGTTGGGTTGGAGAAATTTTTATTTACTATCCCTAGTGATGGGAACTTATCTTATTGTCATTATTGTGGCCGGGGAGATTTGGGTTTAGAGTCTAACCG GCTACTTGTCTGTGGTTCTTGTAAAGTCGCGGTTCATAGGAAGTGCTATGGTGTGTTGGGTGATGTGCATTGTGCGTCTTGGTTTTGCTCATGGTGTGAG CAAAAAGATGAAGTAAGTGGAATGGCGAATCCTTGTGTTCTTTGTCCCAACAAGGGCGGGGCTTTGAAACCTGTTAGTAGAAGTGGGGAAGGTGTTGAGT GGGTCCAGTTTGCTCATTTATTTTGTTGCCTGTGGACGCCTGAAGTTTATGTGGATGATTTGAAGAAGATGGAGCCTATTGCGAATTTGGATCAGATTGA GGAAAGCAGGAGAAAATTAGTATGTAATGTTTGCAAGGTGAAGTCTGGTGCATGTGTTCGGTGTAGCAATGGTATGTTTTGTTGCCTTATTGAACTTGGC ACTTATCATTATTTAGGCTGGTCTTGTGGAGAACATATACTACTATAGCTGATTCTGCATCTGCTAGGCACCTTATTTGGTATGGGGAATCCATGTTTCT AGTCACACTCTATTATAGTTATCTATTTCCCTTTGAATTTTAGTATGCACGTTTCTTGTTGGCAGGTAGAAAGATCGTTGGGTTTTTCCCTTCAAAAAAT GATTCACATGTTACTATTAAACTTGTAGCGAATCAAAATTGACTCCATTTTCTGCCTGATTAGCATTCGATCCTTTTGGTGCTAATTTTATCAAATTTCT CTGCCAATTTTTAGACCGCAGACCATACATTTTGGTAGTGATCAAGAACACAAACATCAGATTGATGAAAGAATGAGAATTTATGAATGCAAAATTCTTC TCAAAGTTTAAGAACCTTGAATTGTTCTCAGATTGATTAAAGTGCTTATTGTTATTGCAATGATGGTTAAGCTAAACTATCAAAATATCAGTATGATTCA ACATCAGAGGACCAGCATACCTGTTTCTTCATGATTAAAGTTTTGATAACTTTTTCCTTTTCTTTTTCCTGATGTACATGCTTCTCTGTATTATTGTTGT TTGGCTGATTGTTATACTTTGATTAAAATGTGATTTGTCCAAAACGGAAAAGAAAAGAAGCGATGAAGTGTTCTGTTTGATGATGAACCTTGAGTCCAGG GCACCTCTTTGGCTCTTCCCCTTCAAGAGGAATGTTTTAATGCGGGATTGCAGAGTTTGATGATGAAAAAGAGAGATCATATGTTTTGCCGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_193890; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_506499
| Blastp | Protein Jade-3 from Homo with 44.53% of identity |
|---|---|
| Blastx | PHD finger protein rhinoceros from Sophophora with 37.23% of identity |
| Eggnog | phd finger(COG5141) |
| Kegg | Link to kegg annotations (9767) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430724.1) |
| Pfam | PHD-finger (PF13831.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |