| Id Trinity | TRINITY_DN52582_c3_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_505452 |
| Sequence | CGCATTTTCACCCATCCCTGTTACGGGTGTGTTAAAAATTGAACATTTTCGGTGTTATTAAGCTTCTGCCTAACCTTTTCCGAAGAAAAAACTTGTGGGG TGTTTTTATTTATTCTTAATTTCGGTTTGTTTTTTTATCCTGTGCAGTTTTCTTATGATTTTTTTGTGTTGATCAATGATGCTGAAATGGGTTGATGAAA AAATTGATTTTTTTGTGTTTTGTTGAATTTTAATTTGTTGGGCCATGTTCATATTTGGTCGGACTAAAATATAATTATAATGTGATTTTATGACTTTTGT GTTCTTGTGTCATACATTCATGTGTTAGATCTTGAAACAATGGAGTTTTCTGGATTTGTTCTGTTTTTGCTGTTGGAGGTGTTCTGAAATTTTTTGTAGC TTATTCTCAATTGGTGATTGTAGCTTATTTTTGAAATGTGGTACTCTCAGGGTTCGTTTTTCCCTATATATCTTGTTTGCATTTAATGATCTGACACACC ATTTATTTGCATGTGTTTTTTTATCAGTGTTGTGAATTATACAGAACTTAACCCGACCTATAGTTTTTTCTGTTATTTTCAATCATTTAGTGGTTTTCCT GCAGCTGGTTTTTGTGGATCTTGGATTCTGTGTACCATCTCTTTCACCTCATTTATGATTTCGAATTTATTGCTGAATGTTCATTTGCAAAAGCTGTTTT TTTATTTACTTATTTGGTGGATTTTCACTTTCAACTTCTTTAGGGTTATTTGCATTTTAAACACAGAAAATATCTTATATGTTCTGGTTTTTACTGCATC ATGTCTCTCAAGATCTGTCTGCCAAGAGGAGCTTGATTTGATCATTGATATTGAGGATTAAGCCCTTGTTCGACACACCAAATAATACGGTTTTCTTGCA AATGCTAAATTTTGTCAGGTCTAGAAGTCAGCCAAGGGTAACCCGACCTATCACGATGGGAGGCATGGATTACGCTGATCCAAAAAGGAAGGGCAATTTT GTTGGAAAAGTTCTTCTTGCTGCCGCATTAACATCATTATGCATTATCATGCTCAAACAATCTCCAACTTTGAATTCCCCTAGTCCGTTTTCCCTCCGGG AACCCGGTGTCACTCATGTTCTAGTAACAGGGGGTGCAGGATATATTGGCTCACATGCAGCTCTGCGACTTCTGAAGGAAAATTACCGTGTCACCATAGT GGACAATTTGTCCCGAGGAAATCTGGGTGCTGTCAGAGTTCTTCAAAACTTATTTCCAGAACCTGGAAGACTTCAATTTATATATGCTGACTTGGGAGAT GCAAAATCGGTGAATAAAATTTTTTTGGAGAATAAATTTGATGCTGTGATGCATTTTGCTGCTGTTGCATATGTGGGAGAAAGCACTGTGGACCCTCTTA AGTATTATCACAACATTACATCAAATACCTTGTTGGTATTGGAATCAATGGCTAAACATGATGTTAAGACATTGATATATTCTAGTACTTGTGCAACATA TGGGGAACCGGATGTGATGCCCATTACTGAAGAAACAAAGCAGAACCCAATCAATCCATATGGGAGAGCCAAGAAGATGGCAGAAGATATCATCCTTGAT TTTTCTAGAAATTCAGACATGGCAGTAATGATTTTGAGATATTTCAATGTCATTGGATCAGATCCAGAGGGGAGATTGGGTGAGGCTCCAAGACCTGAAC TGCGAGAGCAAGGTCGAATTTCAGGTGCCTGCTTTGATGCAGCTCGCGGCATTATACCAGGTTTAATGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_193901; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_505452
| Blastp | UDP-arabinose 4-epimerase 1 from Arabidopsis with 84.03% of identity |
|---|---|
| Blastx | UDP-arabinose 4-epimerase 1 from Arabidopsis with 84.03% of identity |
| Eggnog | udp-glucose 4-epimerase(COG1087) |
| Kegg | Link to kegg annotations (AT1G30620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460002.1) |
| Pfam | RmlD substrate binding domain (PF04321.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |