Ll_transcript_504855

• Id Trinity: TRINITY_DN52588_c0_g1_i16
• Name Transcript: Ll_transcript_504855
• Sequence: TTTCACCCTTCAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATATGATTCACTCTTCCCATGGCGGAAGTTGCTTCTTACGCTTTG GGTCCTCGATTAGATATTCAGCAATTACAATTTGAAGCCCAGCATCGGTGGTTGCGGCCTTCAGAAATTTGTGAAATTCTCCGTAACTATCGGATGTTTC ACATCACACCAGAACCTCATAACAGGCCACCAAGTGGTTCACTTTTTCTTTTTGATCGTAAGATTTTGAGATACTTTAGAAAGGATGGACACAACTGGAG AAAGAAAAAGGACGGGAAAACTGTGAAAGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACACTGCTATTATGCTCATGGAGAAGATAAT GAAAATTTTCAGAGGCGAAGCTACTGGATGCTTGAACCAGATATGATGCACATAGTTTTTGTTCACTACTTGGAAGTTAAGGGTAACAAGACAACTATCG GAGGAGTTACAGAAAGTGATGATGTTACATCAGATTCCCAAAAGGTCACCTCTCCATCATCTGGCTTTCCCGCAAATTATAGCACTGCGCCTTCACTGAG TACAGATTCCATGAGCCCAACTAGCAGCCTGACATCTTTGCGTGAAGATGCTGATTCTGAGGATATTCACCAAGCAAGTTCTGGATTGCGCCCGTTACGT GCGTCACAATATATAGGAAATGGTCTTCTGACGAACAAGCTGGATTCTGGATTGAACAGTTCTAATCTTCTTCATCCCATTTTAGGTGGTCATGGGCAGT CATCAACTTCTGAAACAGATTATACCCCGCTTCTTCCAGGGGATAAATTTAGAGGAGATGATACTACTTACAGTGATGACCAGAAAGCACGTGGCATTGC ATCCTGGGACAATGGCTTGGATCAATGCACTATGGCATTGCATACTGATCCTTCTCTTATATCATTTCCTTCCATCCCATCCAGTTTGGTGGGAAACATT CTTGATGAAGAACATACCGTTTTCAGTGACCTGTTAGTGGGTAGAAGTGGCCTCACCGAGGAGGCAAGGAGTTCTCAGTCTCTCCAATCAAATTGGCAGA TTACTTTTGAAGACAATTCAGGACACTTGCTAGACATAACCCAATCACCAAGTTTGGATTTTGGATCTGAATATAGCACTGGTTTACTAGGGAATGAAAC TCATAGTGGAAGCTCTGAAATTGCTCCAAACCTGTTCAGCTTTCATGGTAGGCCAAAAGAGCAGCATTTGCAGCAATACTATCCAGAGCAGCATGAAGAC GGACAATCTCAACTTGCACTAAAACTCAGTTCGGTGAATAAAGTTTCTGGTGAAGAAAGTATTAACTATGCCTTCACTGCAAAGCGCACATTATTGGATA GAGGCGAAAGCCTGAAGAAGGTTGATAGCTTCTCTCGGTGGGTTAGTAAAGAACTTGGAGAGGTTGATGATTTGAATATGCAGTCCTCACCTGGTATTTC ATGGAGTACAGATGAATGTGGGCATGTCATAGATGATGCCTCATTGAGCCCATCCCTCTCTCGGGACCAGCTGTTTAGCATAAATGATTTTTCACCTAAA TGGGCTTATTCTGAATCAGAAACTGAGGTGTTGATAATTGGAGCATTTTTGAAGAGTCAACCTGACGTGGCAACCTCTAGCTGGTCATGTATGTTTGGGG AAGTGGAGGTTCCTGCGGAGGTTTTAGCTAATGGAATGCTGTGCTGTCAAGCTCCACCTCTTAAGATTGGACGGGTTCCTTTCTATGTTACATGTTCCAA TAGGTTAGCTTGTAGTGAGGTGCGTGAATTTGATTACAGAGAGGGCTTTTCTGCAAATGTAGATTTTGCAGGTATTTATGACAGTACATCTGATATGCCG CTTCATTTGCAACTGGAGGAGTTGCTTTCTTTAAAACCAGTGCAGCCTTCAAATCTCACTTTTGAGGGTTATATGGAGCAAAGAAGCATAATTTTGAAGC TTATTTCACAGAGGGAGGAAGAGGAATATTCAAGTAAGGGAGAGTCTACTCAAGAGATGGGTATCTCGCAACAAAAGGTTAAGGAGCATCTTCACAGGCA GGTTAAGGAGAAGCTGTATTCATGGCTTCTTCACAAAGCAACTGACACTGGTAAAGGGCCAAATATCTTAGACAAGAATGGGCAGGGTGCATTACATTTA GCTTCTGCTCTTGGTTATGACTGGGGCATCAAACCCATTTTAACTGCTGGAGTTAATATCAATTTCCGCGATGTGAATGGGTGGACAGCTCTACATTGGG CTGCATTTTGTGGCAGAGAGCGGACAGTTGCTGTCCTTGTCTCCATGGGTGCGGATTCTGGAGCATTGACAGATCCATCTCCAGCATTTCCTTCAGGTAG AACACCTGCAGATCTTGCATCCAGCAACGAGCACAAAGGAATCTCTGGTTTTCTTGCCGAGTCTTTATTAACAGGCCACCTTCAATCTCTCACGGTGGAT GATCAACACAAAGGTGGTAGGCAACAAACTTCAGGATTGAACACAGTGCAGACAGTTTCCGAACGAACCGCCACACCTGTGTTCTATGGTGATATGCCAG ATGCCCTCAGTCTCAAGGATTCTCTTACTGCTGTCCGTAATGCTATACAAGCTGCTGATCGTATACATCAAGTATTCAGAATGCAGTCATTTCAGAGAAA GCAATTAAATCAGTATGAAGATGATGATGAGCTTGGGTTGGCAGAGCAGCAAGCTTTTTCCCTTATTGCTTCTAAGTCATGCAAATCTGGACAAGGAGAT GGTTTAGCCAATGCTGCTGCAACACAAATACAGAAAAAGTTTCGCGGTTGGAAGAAGAGACAAGAGTTCTTGTTCATTCGTCAGAGAGTTGTGAAAATCC AGGCCCATTTTAGAGGTCACCAGGTAAGGAAGAAGTATGGAAATATCATCTGGTCTGTGGGAATACTAGAGAAGGTTATATTACGCTGGAGACGCAAGGG CAGTGGTTTACGTGGATTTCGACAAGATGCCCTTCCTAAGGCTCCCAGCCAACAAAGTGATCCTGTGAAAGAGGATGATTATGATTTTCTCAAGGAAGGA AGGAAACAAAGTGAGGAAAAGTTCCAAAAGGCCCTTTCAAGGGTGAAGTCCATGGTTCAGTATCCAGAGGCACGGGCTCAATACCGGCGACTGCTGAATG TCGTTGAGGACTTCCGTCAAACCAAGGCATGCAATATGGATTTTGTCAATGCTGAAGAGACAGTTGATGGTGTGGAGGAGTTGATTGATATTGATATGCT TTTAAATGATGATAATTTCATTCCTATATCATTTGATTGATTCTCTGTGGTGGCCATTCCTATCTAACATCGTCTTGATGTATATAATTCTAATCACTTA CTTGGATCCAAGGCTAATATATAAGTATAAATATATGATATAGGTAGCTTGATTCTGGCTTGACAGTTTCAGATATTTTAATCTAATGAGACATTGTTTG GTTTTGTTTATGGTGGTTTTTATATGAAAAGAGTGATTCTATTTACAATTGGTTGGGGATTATAGTATAATGTATAACTGCAATTTGTACAAAAGTGGGC TGTGGTCAGAGGAATTATAACTAGGTACTAATTATGACATCTGAGCTTGTTTTGTGGAAGAATAATTACTAATTTACTATCATCATTCATTTTATTTTAT TTTT
• Tissue: pods
• Gene name: LI_gene_193947;
• Additional information: details;

Expression of Ll_transcript_504855

FPKM

• PAB: 9.3
• PNAB: 7.1
• PS1: 9.1
• PS2: 6.1
• PS3: 8.3
• PW1: 5.9
• PW2: 6
• PW3: 6.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_504855

• Blastp: Calmodulin-binding transcription activator 2 from Arabidopsis with 51.83% of identity
• Blastx: Calmodulin-binding transcription activator 2 from Arabidopsis with 51.19% of identity
• Eggnog: Transcription activator(ENOG410XS5M)
• Kegg: Link to kegg annotations (AT5G64220)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425726.1)
• Pfam: CG-1 domain (PF03859.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;