| Id Trinity | TRINITY_DN52588_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_504839 |
| Sequence | TTTCACCCTTCAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATATGATTCACTCTTCCCATGGCGGAAGTTGCTTCTTACGCTTTGGG TCCTCGATTAGATATTCAGCAATTACAATTTGAAGCCCAGCATCGGTGGTTGCGGCCTTCAGAAATTTGTGAAATTCTCCGTAACTATCGGATGTTTCAC ATCACACCAGAACCTCATAACAGGCCACCAAGTGGTTCACTTTTTCTTTTTGATCGTAAGATTTTGAGATACTTTAGAAAGGATGGACACAACTGGAGAA AGAAAAAGGACGGGAAAACTGTGAAAGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACACTGCTATTATGCTCATGGAGAAGATAATGA AAATTTTCAGAGGCGAAGCTACTGGATGCTTGAACCAGATATGATGCACATAGTTTTTGTTCACTACTTGGAAGTTAAGGGTAACAAGACAACTATCGGA GGAGTTACAGAAAGTGATGATGTTACATCAGATTCCCAAAAGGTCACCTCTCCATCATCTGGCTTTCCCGCAAATTATAGCACTGCGCCTTCACTGAGTA CAGATTCCATGAGCCCAACTAGCAGCCTGACATCTTTGCGTGAAGATGCTGATTCTGAGGATATTCACCAAGCAAGTTCTGGATTGCGCCCGTTACGTGC GTCACAATATATAGGAAATGGTCTTCTGACGAACAAGCTGGATTCTGGATTGAACAGTTCTAATCTTCTTCATCCCATTTTAGGTGGTCATGGGCAGTCA TCAACTTCTGAAACAGATTATACCCCGCTTCTTCCAGGGGATAAATTTAGAGGAGATGATACTACTTACAGTGATGACCAGAAAGCACGTGGCATTGCAT CCTGGGACAATGGCTTGGATCAATGCACTATGGCATTGCATACTGATCCTTCTCTTATATCATTTCCTTCCATCCCATCCAGTTTGGTGGGAAACATTCT TGATGAAGAACATACCGTTTTCAGTGACCTGTTAGTGGGTAGAAGTGGCCTCACCGAGGAGGCAAGGAGTTCTCAGTCTCTCCAATCAAATTGGCAGATT ACTTTTGAAGACAATTCAGGACACTTGCTAGACATAACCCAATCACCAAGTTTGGATTTTGGATCTGAATATAGCACTGGTTTACTAGGGAATGAAACTC ATAGTGGAAGCTCTGAAATTGCTCCAAACCTGTTCAGCTTTCATGGTAGGCCAAAAGAGCAGCATTTGCAGCAATACTATCCAGAGCAGCATGAAGACGG ACAATCTCAACTTGCACTAAAACTCAGTTCGGTGAATAAAGTTTCTGGTGAAGAAAGTATTAACTATGCCTTCACTGCAAAGCGCACATTATTGGATAGA GGCGAAAGCCTGAAGAAGGTTGATAGCTTCTCTCGGTGGGTTAGTAAAGAACTTGGAGAGGTTGATGATTTGAATATGCAGTCCTCACCTGGTATTTCAT GGAGTACAGATGAATGTGGGCATGTCATAGATGATGCCTCATTGAGCCCATCCCTCTCTCGGGACCAGCTGTTTAGCATAAATGATTTTTCACCTAAATG GGCATATGCTGAATCTGAAGCTGAGGTGTTGATTATTGGAGCATTTTTGAAGAGTCAACCTGAGGGGACAACCTGTAACTGGTCCTGTATGTTTGGGGAA GTTGAGGTTCCTGCTGAGGTTTTAGCTAATGGAATTCTGTGCTGTCAAGCTCCACCTCTTAAGATTGGAAGAGTCCCCTTCTATGTAACATGTTCCAATC GCTTAGCTTGTAGTGAGGTGCGGGAATTTGATTACAGAGTTGGCTTTTCTGGAAATGTAGATTTTGCAGATATCTATGCCAGTTCATTTGAAATGGCACT CCATCTGCAACTGGAGGAGTTGCTTTCTTTAAAACCAGTGCACCCTTCAAATATAACTTTCGAGGGTTATTCAGAGCAAAGAAACATAATTTTTAAGCTT ATTTCACAGAGGGAGGAAGAGGAATATTCAAGTAGGGAAGAGTGCACTGTGAAGAAAGATATATCAGAAGAAAAGGTTAAGGAGCATCTTCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_193947; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_504839
| Blastp | Calmodulin-binding transcription activator 2 from Arabidopsis with 44.2% of identity |
|---|---|
| Blastx | Calmodulin-binding transcription activator 2 from Arabidopsis with 43.25% of identity |
| Eggnog | Transcription activator(ENOG410XS5M) |
| Kegg | Link to kegg annotations (AT5G64220) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425726.1) |
| Pfam | CG-1 domain (PF03859.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |