Ll_transcript_504865

• Id Trinity: TRINITY_DN52588_c0_g1_i22
• Name Transcript: Ll_transcript_504865
• Sequence: TTTCACCCTTCAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTCAGTGTTCGCCATGGGTGACGGTGCTTCTTGCGGATTGGCT CATCCACTAGATATTCAGCAATTACAAATTGAAGCCCAGCATCGGTGGTTGCGGCCTTCAGAAATTTGTGAAATTCTCCGTAACTATCGGATGTTTCACA TCACACCAGAACCTCATAACAGGCCTCCAAGTGGTTCACTTTTTCTTTTTGATCGTAAGATTTTGAGATACTTTAGAAAGGATGGACACAACTGGAGAAA GAAAAAGGACGGGAAAACTGTGAAAGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACACTGCTATTATGCTCATGGAGAAGATAATGAA AATTTTCAGAGGCGAAGCTACTGGATGCTTGAACCAGATATGATGCACATAGTTTTTGTTCACTACTTGGAAGTTAAGGGTAACAAGACAACTATCGGAG GAGTTACAGAAAGTGATGATGTTACATCAGATTCCCAAAAGGTCACCTCTCCATCATCTGGCTTTCCCGCAAATTATAGCACTGCGCCTTCACTGAGTAC AGATTCCATGAGCCCAACTAGCAGCCTGACATCTTTGCGTGAAGATGCTGATTCTGAGGATATTCACCAAGCAAGTTCTGGATTGCGCCCGTTACGTGCG TCACAATATATAGGAAATGGTCTTCTGACGAACAAGCTGGATTCTGGATTGAACAGTTCTAATCTTCTTCATCCCATTTTAGGTGGTCATGGGCAGTCAT CAACTTCTGAAACAGATTATACCCCGCTTCTTCCAGGGGATAAATTTAGAGGAGATGATACTACTTACAGTGATGACCAGAAAGCACGTGGCATTGCATC CTGGGACAATGGCTTGGATCAATGCACTATGGCATTGCATACTGATCCTTCTCTTATATCATTTCCTTCCATCCCATCCAGTTTGGTGGGAAACATTCTT GATGAAGAACATACCGTTTTCAGTGACCTGTTAGTGGGTAGAAGTGGCCTCACCGAGGAGGCAAGGAGTTCTCAGTCTCTCCAATCAAATTGGCAGATTA CTTTTGAAGACAATTCAGGACACTTGCTAGACATAACCCAATCACCAAGTTTGGATTTTGGATCTGAATATAGCACTGGTTTACTAGGGAATGAAACTCA TAGTGGAAGCTCTGAAATTGCTCCAAACCTGTTCAGCTTTCATGGTAGGCCAAAAGAGCAGCATTTGCAGCAATACTATCCAGAGCAGCATGAAGACGGA CAATCTCAACTTGCACTAAAACTCAGTTCGGTGAATAAAGTTTCTGGTGAAGAAAGTATTAACTATGCCTTCACTGCAAAGCGCACATTATTGGATAGAG GCGAAAGCCTGAAGAAGGTTGATAGCTTCTCTCGGTGGGTTAGTAAAGAACTTGGAGAGGTTGATGATTTGAATATGCAGTCCTCACCTGGTATTTCATG GAGTACAGATGAATGTGGGCATGTCATAGATGATGCCTCATTGAGCCCATCCCTCTCTCGGGACCAGCTGTTTAGCATAAATGATTTTTCACCTAAATGG GCATATGCTGAATCTGAAGCTGAGGTGTTGATTATTGGAGCATTTTTGAAGAGTCAACCTGAGGGGACAACCTGTAACTGGTCCTGTATGTTTGGGGAGG TGGAGGTTCCTGCTGAGGTTTTAGCTAATGGAATTCTGTGCTGTCAAGCTCCACCTCTTAAGATTGGAAGAGTCCCCTTCTATGTAACATGTTCCAATCG CTTAGCTTGTAGTGAGGTGCGGGAATTCGACTACAGAGAGGGCATTTCTGGAAATGTAGATTTTGCAGATATCTATTACAGTTCATTTGAAACGGCGCTT CATTTGCAATTGGAGGAGTTGCTTTCTTTAAGACCAGTGCACCTTCCAAATCAAACATTTGAGGGTTATATGGAGCAAAGAAACATAATTTTTAAGCTTA TTTCACTGAGGGAGGAAGAGGAATATTCAAGTAAGGAAGAGCACAGTGTAGAGATGGATACATCACAGCAAAAGGTTAAGGACCATCTTCACAGGCAGGT TAAAGAGAAGTTGTATTCATGGCTTCTTTGCATAGTAACTGACAGTGGTAAAGGGCCAAATATCTTAGACAAAAACGGGCAGGGGGTGTTACATTTAGCT GCTGCTCTTGGTTATGATTGGGGCATAAAACCAATTTTAACTGCTGGAGTTAATATCAATTTCCGTGATGTGAATGGTTGGACAGCTCTACACTGGGCTG CATTCTGTGGCAGAGAGCGGACAGTTGCTCTCCTTGTCTCCACAGGCGCGGATTCTGGAGCATTGACGGATCCATCTCCAGCATTTCCTTCAGGTAGAAC ACCTGCAGATCTTGCATCTAGCAATGGACACAAAGGAATCTCTGGTTTTCTTGCTGAGACTCTATTAACCAGTCACCTCAAAACTCTCACAATGGATGAA CAACACAAAGGTGGTGGGCAACAAATTTCAGGATTGAGCTCAGTGCAGACAGTTTCCGAACGAACTGTAACACCTGTGTTCTATGGTGATATGCCAGATG CCCTCAGTCTCAAGGATTCTCTTACTGCTGTCCGCAATGCTATACAAGCTGCTGATCGTATACATCAAGTGTTCAGAATGCAGTCATTTCAGAGGAAGAA ATTAAATCAGTATGAAGATGATGATGAGTTTGGGTTGGCAGAGCAGCAAGCTCTTTCCCTTGTAGCTTCTAAGTCATGCAAATCCGGACAAGTAGATGGT TTAGCTAATACTGCTGCAGTACAAATACAGAAAAAGTTTCGTGGTTGGAAGAAGAGACAAGAGTTCTTGTTCATTCGTCAGAGAATTGTTAAAATCCAGG CCCATGTTAGAGGTCACCAGGTAAGAAAGAAGTATAAAACAATAATCTGGTCTGTGGGAATACTGGAAAAGGTTATATTACGCTGGAGACGCAAGGGCAG TGGTTTACGTGGATTTCGACAAGATGCCCTTCCTAAGGCTCCCAGCCAACAAAGTGATCCTGTGAAAGAGGATGATTATGAT
• Tissue: pods
• Gene name: LI_gene_193947;
• Additional information: details;

Expression of Ll_transcript_504865

FPKM

• PAB: 10.6
• PNAB: 7.1
• PS1: 16.5
• PS2: 5.9
• PS3: 8.7
• PW1: 8.3
• PW2: 8.2
• PW3: 7.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_504865

• Blastp: Calmodulin-binding transcription activator 2 from Arabidopsis with 51.32% of identity
• Blastx: Calmodulin-binding transcription activator 2 from Arabidopsis with 50.54% of identity
• Eggnog: Transcription activator(ENOG410XS5M)
• Kegg: Link to kegg annotations (AT5G64220)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425726.1)
• Pfam: CG-1 domain (PF03859.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;