Ll_transcript_504868

• Id Trinity: TRINITY_DN52588_c0_g1_i25
• Name Transcript: Ll_transcript_504868
• Sequence: GTCACCTTTTCACTTTCTGATGTCAGTTTGTCTGAGACTTACAAAACACGACAACAACAATACTCTTTCCTGGTTCTTTCTTCGTTCTATTTGTTTCATA TTGAATTTCATTTCTCTTTCTCTGATTCATTCTTCGCCATGGCTGAGGGAGTTTCTTATGGATTAGGTCCTCGATTAGATATTCAGCAATTACAATTTGA AGCCCAGCATCGGTGGTTGCGGCCTTCAGAAATTTGTGAAATTCTCCGTAACTATCGGATGTTTCACATCACACCAGAACCTCATAACAGGCCACCAAGT GGTTCACTTTTTCTTTTTGATCGTAAGATTTTGAGATACTTTAGAAAGGATGGGCATAATTGGAGAAAGAAAAAAGATGGAAAAACTGTGAAAGAAGCTC ATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCCATGGAGAAGGTAATGAAAATTTCCAAAGGCGAAGCTACTGGATGCTTGA ACCAGATATGATGCACATAGTTTTTGTTCACTACTTGGAAGTAAAGGGTAACAAGACAACTATTGGAGGAATTACAGAAAGTGACGAAGTTACATCAGAT TCCCAAAAGGTCACCTCTCCATCATCTGGCTTTCCCGCAAATTATAGCACTGCGCCTTCACTGAGTACAGATTCCATGAGCCCAACTAGCAGCCTGACAT CTTTGCGTGAAGATGCTGATTCTGAGGATATTCACCAAGCAAGTTCTGGATTGCGCCCGTTACGTGCGTCACAATATATAGGAAATGGTCTTCTGACGAA CAAGCTGGATTCTGGATTGAACAGTTCTAATCTTCTTCATCCCATTTTAGGTGGTCATGGGCAGTCATCAACTTCTGAAACAGATTATACCCCGCTTCTT CCAGGGGATAAATTTAGAGGAGATGATACTACTTACAGTGATGACCAGAAAGCACGTGGCATTGCATCCTGGGACAATGGCTTGGATCAATGCACTATGG CATTGCATACTGATCCTTCTCTTATATCATTTCCTTCCATCCCATCCAGTTTGGTGGGAAACATTCTTGATGAAGAACATACCGTTTTCAGTGACCTGTT AGTGGGTAGAAGTGGCCTCACCGAGGAGGCAAGGAGTTCTCAGTCTCTCCAATCAAATTGGCAGATTACTTTTGAAGACAATTCAGGACACTTGCTAGAC ATAACCCAATCACCAAGTTTGGATTTTGGATCTGAATATAGCACTGGTTTACTAGGGAATGAAACTCATAGTGGAAGCTCTGAAATTGCTCCAAACCTGT TCAGCTTTCATGGTAGGCCAAAAGAGCAGCATTTGCAGCAATACTATCCAGAGCAGCATGAAGACGGACAATCTCAACTTGCACTAAAACTCAGTTCGGT GAATAAAGTTTCTGGTGAAGAAAGTATTAACTATGCCTTCACTGCAAAGCGCACATTATTGGATAGAGGCGAAAGCCTGAAGAAGGTTGATAGCTTCTCT CGGTGGGTTAGTAAAGAACTTGGAGAGGTTGATGATTTGAATATGCAGTCCTCACCTGGTATTTCATGGAGTACAGATGAATGTGGGCATGTCATAGATG ATGCCTCATTGAGCCCATCCCTCTCTCGGGACCAGCTGTTTAGCATAAATGATTTTTCACCTAAATGGGCATATGCTGAATCTGAAGCTGAGGTGTTGAT TATTGGAGCATTTTTGAAGAGTCAACCTGAGGGGACAACCTGTAACTGGTCCTGTATGTTTGGGGAGGTGGAGGTTCCTGCTGAGGTTTTAGCTAATGGA ATTCTGTGCTGTCAAGCTCCACCTCTTAAGATTGGAAGAGTCCCCTTCTATGTAACATGTTCCAATCGCTTAGCTTGTAGTGAGGTGCGGGAATTCGACT ACAGAGAGGGCATTTCTGGAAATGTAGATTTTGCAGATATCTATTACAGTTCATTTGAAACGGCGCTTCATTTGCAATTGGAGGAGTTGCTTTCTTTAAG ACCAGTGCACCTTCCAAATCAAACATTTGAGGGTTATATGGAGCAAAGAAACATAATTTTTAAGCTTATTTCACTGAGGGAGGAAGAGGAATATTCAAGT AAGGAAGAGCACAGTGTAGAGATGGATACATCACAGCAAAAGGTTAAGGACCATCTTCACAGGCAGGTTAAAGAGAAACTGTATTCATGGCTTCTTCGCA TAGTAACTGACAGTGGTAAAGGGCCAAATATCTTAGACAAAAATGGGCAGGGTGTGTTACATTTAGCTGCTGCTCTTGGTTACGACTGGGGCATAAAACC GATTTTATTTGCTGGAGTTAATATCAATTTCCGTGATGTGAATGGTTGGACAGCTCTACACTGGGCTGCATTCTGTGGCCGAGAGCGGACAGTTGCTGTC CTTGTCTCCATGGGCGCAGATTCAGGAGCTTTGACTGATCCATCTCCAGCTTTCCCTTCAGGTAGAACACCTGCAGA
• Tissue: pods
• Gene name: LI_gene_193947;
• Additional information: details;

Expression of Ll_transcript_504868

FPKM

• PAB: 6.3
• PNAB: 3.5
• PS1: 5.7
• PS2: 2.7
• PS3: 4.1
• PW1: 6.9
• PW2: 4.6
• PW3: 2.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_504868

• Blastp: Calmodulin-binding transcription activator 2 from Arabidopsis with 48.06% of identity
• Blastx: Calmodulin-binding transcription activator 2 from Arabidopsis with 47.24% of identity
• Eggnog: Transcription activator(ENOG410XS5M)
• Kegg: Link to kegg annotations (AT5G64220)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425726.1)
• Pfam: CG-1 domain (PF03859.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;