Ll_transcript_504743

• Id Trinity: TRINITY_DN52593_c1_g7_i1
• Name Transcript: Ll_transcript_504743
• Sequence: TTTAATTTTCCATTGATCTTCCTCTGTTTCTTCATATAATCTGAAAACGGATAACATGCCACAAGAATTGCACAATCTTTAATATCCCAAATTATTTAAT TCAATTTTATATAAATTTTCATATAATAATATTCTATTATATAGTGTCTACACACATATTCTTTGATCATGTTTCATCAATGATCAAGATTTGTAATTCA ACCTATTTTCGATAATTTCTGCATCAGATCTTATCTGGGTCGATCTTAGTTTCCGTAAAAATCATTTTTTTAATTCTTTCTATAATATCCATTTTCTCTT TTTCAGTTTTAAGGGTGTGTGTGATTGTGAAGTTTGAATATTTGTTTTGTTTCAATGGGTATTGAATTGTGATGATGATGAATACTATTGAATAGATATG ATTCCAGAAAGGTGATTTCTTTGATCAGAAGAGTTTTTTTCTTCTTCAGTTCTTTGATTCCTTCCCCTTTTTTGGGGAAGTGAATGATTGTGCTTTGGAG TGGCTCAAGAAAGATTGGTTTGAAAATTCTTGAGTTTGGAATATTCATGGAAGCTGTGTTTTTTGGTTCATATTTCATGTGATGAACATGGTGTTGAAAG GTTTTTCATCTTGAACGGAATGGAGAAGGAGAACCACGTATTATCTCGAGAAAGTTGCGAATTGTTTGCTAGATTCAGATTATGAAGATTTATTGTCAGA GTTGTAACTTGAGCGGCAAATGGGCATGTCATTATGAACTGGGAAGCAACATTGTTTGTCAATGGATGCCATAGGCAATATATTCTGTGAGCTTGTCACT TTCGTCAAATTATCGATTCCTTGGCGAAGTGAACCAGCGAATGTGTCTAGGGATTTTTGGATGCCCGATCAGAGTTGTAGAGTATGCTACGAGTGTGATT CTCAATTCACTTTATTTAACCGTAGACACCATTGTCGCCTCTGTGGGCGAATTTTCTGTGGCAAGTGTACAGCAAACACGGTTCCTACTCCATCTAGCAG CCAAAACAATTCATGGGATGAGAATGAAAGGATCCGTGTATGCAATTATTGTTACAAACAATGGGAGCAGGGAATAGTTGCTTTTGATAACGAGATTCAG GTTTCCAATTTGGAACCTATTTCGTCATTATCGACTTCAAGCTTGGTCAGCAGTAAATCCAGTTGCACTGCTGACAGTAGTAACATCACTCTTAGCTCCA TGCCTTATTCCGTTGGCTCTCATCAACAAATTCAGCAGGGTTCGAGTCTCAGCCAGCAGCAATCACCTGTAAGGGTAAACGGCGTTGATAGGGATCCTGT GTCATCATTGAGAGGGAGGAATGATCTTGTAGCAGATCAAGGGGAACAATTATCAAAGCAATATGGATTCTCAATGAACGGGAGTAATGACGAGGATGAG TACAGTGCATATCAATCAGATTCTGAAACAAGGTGCCAAGTGAATGGCTGCTATGCTCAAGTTGATTTTGATGGTATAGGTGAAACAGATGGATTACCGA AAGCGCGTCCTGGTAGAGAAGTCAATGCGAAAGTCTCTCCAAAAAAGCACGGTTTTAATACACATAGTTTGGAAGGAACCCATACTATTGAAAAGAATGA AGATGAACCTGATATCTGTGATGAAAATGAAGCAATTTCCTCTGTATATGTTTCAGATGATGTTGATTCTGAACCTGTTGATTTTGAAAATAATGGAGTT CTCTGGCTCCCTCCTGAACCGGAAGACGGGGAAGATGAGAGGGAAGCTAGTTTGTTTGATGATGATGATGATTATGATGGAAATGTCACAGGAGAGTGGG GGTATCTGCGAACATCAAACAGTTTCGGAAGCGGGGAGTATCGCTATAGAGATAGGTCGGGTGAGGAGCACAAAAAGGTCATGAAAAATGCAGTTGATGG GCACTTCAGGGCTTTGGTAACTCAGCTTTTAGAGGTTGAAAACCTACCTGCTATAGACAATGACCAAAACAGTTGGTTGGAGATCATCACATCTTTGTCA TGGGAAGCTGCTAGTTTATTGAAACCAGATACGAGTAAAGGAGGAGGGATGGACCCAGCCGGATATGCGAAAATCAAATGCATAGCTTGTGGAAGCCGCA TCGAAAGTGAGGTGGTTAAAGGAGTTGTTTGTAAGAAAAACGTGGCTCATCGGCGAATGAAGTCAAAAATGGATAAACCTCGGTTGTTGATCATCGGAGG GGCTCTTGAGTACCAGCGTGTCACAAATCTCCTTTCTAGTGTCGATACCCTGTTGCAGCAGGAAACGGACCATCTGAAGATGGCAGTGGCGAAGATAGCT GCACACAATCCGACTGTCCTTTTGGTAGAGAAATCAGTTTCTCGATATGCACAGGAGTATCTTCTTGCAAAAGATATATCTCTAGTTCTCAATGTGAAGA GGCCACTTTTGGAGCGCATAGCACGCTGTACGGGAACTCAAATAGTGCCTTCAATTGACCATCTTTCATCACAAAAGTTGGGATACTGTGAGACATTTCA TGTCGAAAAGTTTGTGGAAGACTTAAGTGGTGGTGGTCAGTCTGCGAAGAAAACAGTGAAGACATTGATGTTTTTTGAAGGCTGTCCGAAACCGTTGGGT TGCACAATTTTACTGAGAGGTGCCGATGAGGATGAACTGAAGAAGGTAAAGCATGTGGTTCAGTATGGAATTTTTGCAGCTTATCATTTGGCTTTGGAGA CATCTTTTCTTGCTGATGAAGGAGCCTCCCCTCTGCCAGAATTTCCGTTGAATAGTTTGGTCCTTCCAAATAAATCACTATCCATTGAGAGGTCCATCTC AATAGTGCCTGGATTTAGTGTTTCTGGCAATATAAACTCTCGGGGGCCGGAACATGGAACTGAACCACGGAGAAGCAAAAGTGTCCCCATTTCTGATCTA GTCTCATTAGTCAGCAGTATAGAGCCCATTTCTTCTCAATCTATGCAGCATGCATCAAACTACGCCCGTTCTACCACCTTTTGCTCCTCTGTTGCTGCTT CCGAAAATGCAATTCCAAATTCATATCATAAGAACCTTCTTCCGTGTGCTAGTGAAAGAACAAGTGAAGTGGACCCCAAACAACTTTTAGTTCCAGAAAC TTCTGAGTTGAAAAACACCTTGGCAGTAATGAACAATCATCCTTCTGCAAATGGTTATGAAAATCAAGGAATTTTGGCTCACACTCCTCAAAGCGGCGAC AGCAAAATTTCTACAAACCAAATAAGTGGACCAGAGTTTTTATCTACAGAAGGTGTTCAAAACCAACCCGAGAATCCTGGAGTCGTGAATGAAGAGCAAA ATACTCTAAAAGAAGAGTTTCCTCCATCACCCTCTGACCAACAAAGCATTTTGGTGTCTTTGTCGTCCCGCTGTGTATGGAAAGGAACTGTGTGTGAGAG GTCCCATCTCTTCCGAATTAAATACTACGGCAGTTTTGATAAACCTTTGGGTCGGTTTCTGCG
• Tissue: pods
• Gene name: LI_gene_193994;
• Additional information: details;

Expression of Ll_transcript_504743

FPKM

• PAB: 0.3
• PNAB: 2.1
• PS1: 2.4
• PS2: 1.6
• PS3: 1.5
• PW1: 2.3
• PW2: 3.7
• PW3: 3.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_504743

• Blastp: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B from Arabidopsis with 55.98% of identity
• Blastx: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B from Arabidopsis with 55.65% of identity
• Eggnog: Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (By similarity)(COG0459)
• Kegg: Link to kegg annotations (AT3G14270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419284.1)
• Pfam: FYVE zinc finger (PF01363.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;