Ll_transcript_504954

• Id Trinity: TRINITY_DN52594_c1_g2_i5
• Name Transcript: Ll_transcript_504954
• Sequence: GAAAACAAAAGCCTATAAATTAAATGTGCTTTTAACCACATATGAAATGATTCTTGCTGATTCTTCTCTTTTGCGTGGAGTTCCTTGGGAAGTTCTCGTC GTTGATGAAGCTCATCGACTGAAGAATGCTCAAAGTAAGCTTTTCAGTTTGCTGAATACATTCTCTTTCCAACATCGTGTGCTGTTGACGGGTACCCCTC TCCAGAACAACCTTGGTGAGATGTACAACTTACTTAATTTCTTGCAACCAGCTTCATTTCCTTCTCTAGCTTCATTTGAGGAGAAATTTAATGATCTCGG GACTACGGAGAAAGTCAATGAGTTGAAAAAACTTGTTGCTCCTCTTATGCTCCGTAGACTTAAGAAGGATGCTATGCAAAATATTCCCCCCAAGACAGAA AGAATGGTTCCTGTTGAGTTGTCATCCATCCAGGCTGAATATTACCGTGCAATGCTTACAAAGAATTATGAGCTACTGCGGAATATTGGGAAAGGGGTTG CCCAAAAATCCATGATGAACATTGTGATGCAACTGAGAAAGGTTTGCAATCATCCATATCTCATACCAGGAACTGAGCCTGAATCTGGATCCGTTGAGTT CCTTCATGATATGAGAATAAAGGCTTCGGCAAAGTTGACCCTTCTGCATTCTATGCTTAAGATTTTGTATCGGGAAGGACACAGAGTTCTTATTTTCTCA CAAATGACCAAACTTCTTGACATTCTAGAGGACTATTTAAATGTAGAATTTGGTCCTAAAACATATGAGAGAGTGGATGGCTCTGTTTCTGTCACTGATC GTCAGGCAGCGATTACACGTTTCAACCAAGACAAGAATCGATTTTTTTTCTTGTTATCCACTCGCTCTTGTGGACTTGGGATAAACTTGGCAACTGCTGA CACTGTGATCATATACGATTCAGATTTTAATCCTCATGCTGATATCCAAGCAATGAATCGGGCACACAGAATTGGACAATCAAAAAGGCTTTTGGTATAC AGACTTGTGGTCCGTGCTAGTGTTGAAGAGCGCATCTTGCAGCTTGCTAAAAAGAAACTGATGCTTGATCAACTTTTTGTAAACAAGTCCGACAATCAAA AGGAAATAGAAGGTATTTTAAAATGGGGAACTGAAGAACTCTTCAATGATTCTCCTGGTCTGAATGGGAAAGGTACAGATGAAACTGAGAATAGCAGCAA AGTTGAGGCAGTAGCAGAGGTAGAGCATAAGCATCGGAAGAGGACTGGTGGTCTTGGAGATGTATACCAGGATAAGTGTACAGAGAGCAGTAGCAAGATT TTGTGGGATGAAAATGCGATTTTAAAATTGCTTGATCGTTCAAATGTTCAAGATGGTTCAGCTGATATTGCAGAAGTGGATTGTGAGAATGATATGCTGG GCTCAGTGAAGGCCGTTGAGTGGAATGATGAATCAACTGAAGAGCATGGAATGGGTGAATCTCCTCCCGATGGGACTGATGATACGTGCACACAGAATTC TGAGAACAAAGAGGATATTATTGTGGTTGTCAATGAAGAAAATGAGTGGGACAGATTACTGCGTATGAGGTGGGAGAAGTACCAAAGTGAGGAGGAAGCA GCTCTTGGTCGAGGGAAGCGGCAGAGGAAAGCTATTTCTTATCGGGAAGTATGTGCTGCACATCCTAGTGAAACAATGAGTGAGAGTGGCAGGGAGGAGG AAAAAGCGCCGGAACCAGAGCCTGAGCGTGAATATACGCCAGCAGGACGGGCCCTGAAGGCAAAATAGTATGACATAGTTTTTTGAATCTGATTTAGTTT TACCGATCTTAAATATGTTTATATGATTTTCTTGATAGTTGATACTGTTAGTTGAAGTTTAACTTCTTGCAACAAGTCCTGCATGCTATTGATGGATCAG TCACAGTAGTTTGAATATCCATACGTTAATTTCAGCTAAATATGGTACATCAATATTTCCTCTTTAGTACTAATAGATTATGGTTGGAGGATTACACGAC TTTCCCTAATTGGTAATTTTCAAACACACGAGGCAGGTTCTCATGCCTTTTGAAGGTTACTATGATATTCCATGTAGTTTTTAGCTTTATGATGAAATGT TCCCTCAATGCCGAATACTAACACTTGCTATTGTTCAACAGTGCTAAGCTCCGTGCTCGGCAGAAGGAACGACTTGCTTGCAGGAATGCAGTCGGAGGAT CACAACCTGCTGATGGACTCCCAGTAACCGAGCCACTCCCACAAACTGAATCCAATGTCAAAGGTGGAGATCTGGGAGCTGGACCTACGCATCCAGTTCA AGAAGGGCCTTCTATAAACTTAATGGGCAGCAAACATGCTCAACTTTCTGAAGCTCGAAACGGCGATGCCAGCTTGTTTTCAAGGACCGACAGGCTTTCA AAACAGAAAACGAGCAGTCACATGGATGTTTCTGTCA
• Tissue: pods
• Gene name: LI_gene_194001;
• Additional information: details;

Expression of Ll_transcript_504954

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0.2
• PS3: 0.4
• PW1: 0.1
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_504954

• Blastp: Protein CHROMATIN REMODELING 4 from Arabidopsis with 79.93% of identity
• Blastx: Protein CHROMATIN REMODELING 4 from Arabidopsis with 79.93% of identity
• Eggnog: helicase(COG0553)
• Kegg: Link to kegg annotations (AT5G44800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447906.1)
• Pfam: SNF2 family N-terminal domain (PF00176.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;