Ll_transcript_507085

• Id Trinity: TRINITY_DN52595_c2_g1_i6
• Name Transcript: Ll_transcript_507085
• Sequence: AAATTAACCAGTTTAATACGGTCACACCGATCAAACCTGTTATTATTATTATTAAGTAATTTGTGAATGTTAGGAATTAAAATTTCCTAATACTGCAAAA CTCGATTAGTATTATTCTCCGCCCCCTTCATATTGCAGCGGCGCAGTTACATAACGGACGTTTTCTCTTGACGTGAGAAGCCGTTACTGGTTTTTGTTAC CTTTGCGGACTTCACTCTCTTAGGTACGAATTCAGAACAAGAGTCACATTATCTGAGAATAACACATAACAGAGAAGTTGGAAGAAGAATATTGATGCTG ATTTGAGGAGTGGAATTGGGATAAGATAATCATTTGAAGATTCTGTTGGAAACCTAGGGTTTCACAGAGAGAAAATATGGATGGAGAACATGTTAGGATT GGGGCGAAGAAGAAGAAGAGATCGAAGCCGGTGGAAATTGGTTTTGATTCGGATGATAATGAGACCATTGGCTCTATGTTTAAGCTAAGGAGGCCTAAGA AGAAGGTTAATTTGGCATTGGAGGGGTCTTGTGGCGATGGAGGCAAGAATGGTAAGGCTGTTGTTAGGAAAGATTCAGTTGCTGATAACAAGGATTTGGG GGGTATGGATGATACCTTGGCTAGTTTCAGGAAGAGGTTGAAGGGTCCAAAGAGAGATCGCGGATCTGAAGCCAGTGGACGAAGAAGTTCTGCTTCAAAC GTGGGTCTGGTGTCATATTCTGATGGATCTTTGAATGTTTCTGTTGAGGGAATTGCGGATCATGGTCTGTCTGGTGATGATTTCATTGCTCAGGAATCAA GGGGCACCTCAAAGGATGAGAAAGTCGTAGATTTGTTGCTTGACGATGGTACACAGCACCCTTCTGATGAGAAAATGGAAGACTCCTTGTCAGTGATTAT CCGAAAGGCGCAATCTAATCTGATTAAGAAATCGCGGGCCTCTTCAAGTTCAAAGAAGAAAAGGGGGAGTCAGAATGATAATGATTTGAGACCTGGCTCT GAAAGTGTTCCTGAAACTGTAGATTCTATGGGTGAATGTAAATCTAGATCTGCTCCTGCCTCGGAATCAGGTAAAAGAGATCTAACATTTGCTGGTGCTG TGTCTCAACCATCTGCTCCGGGTGAATTTTCTTCCATTTCTGATAAACAAAAGTACAGTGATGATTGTTTTCAAGAGGATGCTGCTGAGGGTATTTGTGA TATTCCAGATGAATCATTAGCTGGTCACTCTCCCTCAACTAATGTCTGCAAAGGAGATAGGCAACAATTGTCTTGTGTGCAATCTGAAAATGTTTGTTTA AATCCGTGTTCTTCCAGGTTAGTTGATGTTGAAATGATTCGTACTATGCCTCTATCAAGAACAGGGGAAGGGACACATGAATGTACTGAGAGTGAGTTCA AGAATAGATCGACTGATGAACTAGCACAAGTGTGTAATGATTCTTCAAAACACGGTGTTTCTGCTTCTATGGAGAAAGAAAGTTCCTTACCTTCTCATGA CACTGGATCCTTGATTAAATCAAGTGGAAGTATATTGATTGAGAATAATTTAACGGTTTCTGGAAACTTTTTCCAGGAATCCTCAGACAATGAAGCTCTA AAGCTCTCTGGATTCCATGTGGAGGAAGATGGAGGTGTAAAATCTGAAACCGAGTTTATATCTGGTAGAAGCTTCTTTGATTGTAGTAGCTCAGATACAA AGGCTGAAGTGAAAGATTTTGCTTTAGGTTCTTCACTTGAAAAAAATGATGTAATAGCTGGTGGTAGCTTATCTCCTATGATGTCTAATGAAGCCAGTGA ATCTGAATTGGCTAATGAGTCAAATCACCCAGACAAACCTTCAGAAATGTGTAATATTCCAAAAGACTCTACTCCTTCAGTTTTTGAATGCTTAGATCCA GTTCAATCCGATGGATCCTCTCTTCCATCTGCAATTCCAGATGAAAATGAGAATTATGCGGAATTTCATGCCTCTCTGTCTGATTTTGCCAACAATGATG GTAAGATCTCAGTCCTTTCACGTGCCGTGCGAAAGGCCAAAATGCATAAGCATGGAGACATGACTTATGAGGGGGATACTGATTGGGAGATTTTAATAAA TGATCAATCTCTTCATGAAAGCCAAGTTTTTGCAGATGGTGACCACACTCTTAGAACAAGGGCGAAGCTTGATTCCTCTTTTAATGTTGTCTATGACTCT GAAAGTGTTGCAGTAGCAGCAGTATCAGCTGGATTGAAAGCCCATGCAGCTAGTCCAATTGAGAAAATAAAATTTAAGGAGATCTTGAAGCGTAAAGGTG GTCTCAGGGAATACTTGGATTGCAGAAATAAGATCTTAAGTCTTTGGAGCAGAGATGTTACACGGATTTTGCCTCTTGCTGAATGTGGTGTTAGTGGTAT CCATTCTGGCGATGAAAGTCCCCGTTCGTTTCTCACTAGGGAAGTCTATGCATTTCTGGATCAATGTGGTTACATAAATGTTGGGATTGCCTCTCAGAAG GAGATTCTTGGAAATAGTGCAAGTGAATGCTGTAAACTTGTAGAAGAAAAAGGTCTTGAGGAAAGTTCCACAGCTTTGGTGGCTGACTCTGAAGATGGAG TTTCCTTTATTGTTGGCCAGACTGAAATGTCAGATACTTCCATGGAGATTAACAAAAGTCTAACACCAGTGTATTACGAAGACCTGAAAACTGAAGCTGC AGAAGACAGAAGGCATGTTAATGCAGCAACAATGGCTATATCAAATATGAGACAACATGAAGAAAGAAAAAATTATGAATGCCTGGAAAACGGGCAAAGC AATGAATCCACCTGCATTAAATCTGCCGTAGGTGATCAGATAGGTGATCCTCTGCAGTTTGATTCAAAGGCTAGAAAGAGAGTGATTATCATTGGAGCTG GTCCTGCTGGGCTAACTGCTGCTCGTCATTTGAAACGTCAGGGATTTCCCGTAATTGTACTTGAGGCTAGGAGTAGGATAGGGGGTCGTGTATTTACAGA CCACTCATCTCTTTCTGTCCCAGTGGATCTTGGTGCTAGCATTATCACTGGTGTGGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCCTCATTG GTTTGTGCTCAATTGGGCCTTGAGTTGACAGTGCTAAACAGTGACTGTCCTCTTTATGATACAGTTACAGGACAAAAGGTTCCGGCAGATATGGATGAAG CACTTGAAGCTGAATACAATAGTCTTCTTGATGACATGGAATTGCTCGTTGCTCAGAAAGGTGAACAGGCGATGAGAATGTCTCTTGAAGATGGTTTAGA ATATGCCCTTAAGATTCGCCGTATGGCACGCTCTGGAAGTATTGGAGAAACTGAAAAACATAATTCTGATTATAGACCATTTGATTCCAAAAGAGGCTGT CCTGTGAAAAAAAATATTGATGAGGAGATTTTGAGTCCTCTGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGTTGTGCTGCTTTGC TTACAGAAGTTTCTCTTCCCTACTGGAATCAAGATGATATCTATGGAGGATTTGGAGGAGCTCATTGTATGATTAAAGGGGGCTACAGCACTGTTGTTGA GTCTCTAGGAGAAGGGCTTGCTGTCCACTTGAACCATGTCGTAACAAATGTGTCCTATGGCATCAATGAATCTGACCAGAATAATAAAGTCAAAGTTTCT ACGTCAAATGGGAATGAATTCTTTGGAGATGCTGTCCTCATCACTGTTCCACTAGGCTGTTTGAAGGCTGAAACTATACAATTCTCCCCCCCTTTGCCCT CATGGAAATATTCTTCTGTTCAGCGTCTTGGATTTGGTGTTCTCAATAAAGTCATTTTGGAATTTCCTTGTGTGTTTTGGGATGATGCTGTGGATTACTT TGGAGCAACATCTGAGGAAAGAGGCAAAAGAGGTCACTGCTTTATGTTCTGGAATGTTAGGAAAACAGTCGGGGCTCCTGTCCTTATAGCATTAGTGGTT GGTAAGGCAGCCATTGATGGTCAGAGTTTGAGCTCTTCTGATCATGTCAACCATGCATTGAAAGTTCTCCGTAAACTATTTGGGGAGGCTTCAGTACCTG ATCCTGTTGGACATGTTGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTGCTTATTCTTATGTTGCTATTGGAGCATCAGGAGAAGACTATGATAT ATTAGGGAGACCAGTTGATAATCGCTTGTTTTTTGCTGGTGAAGCGACCTGCAAAGAGCATCCTGATACAGTCGGTGGTGCAATGATGAGTGGACTACGG GAGGCCGTTCGCATAATTGACATATTGAGCACGGGAAATGATTACACTGCAGAAGTGGAGGCAATGGAAGCTGCCTTGAGACAGTCAGATACCGAAAATG AAGTTAGGGATATAACAAAGAGACTCAACACAATAGAGCTTTCTAACCTGTTCTACAAGAACTCTTTGGATGATGCTCAAATATTAACCCGGGAAGCTTT ACTAAGAGAAATGTTCCTTAATGCGAAAACCAATGCTGGGCGCTTGCATGTGGCCAAAGAATTGCTATGCCTTCCTGTTGGAAACTTGAAGTCGTTTGCT GGGAGTAAAGAAGGGCTAGCTGTTCTCAACTCATGGATACTGGACTCAATGGGGAAGGATGGTACCCAACTCTTGCGGCACTGTGTGCGTCTTCTTGTGC GTGTTTCAACTGATCTACTTGCTGTACGCTTGTCAGGGATAGGGAAAACAGTGAAGGAAAAAGTTTGCGTTCATACCAGCCGCGACATTCGTGCTATAGC AAGCCAGTTGGTAAATATATGGCTTGAAGTATTCCGCAAGGAGAAAAAAGCATCTAATGGGGGATTGAAGTTGACAAGACAAGCAACTGCTGTAGATTTA CTGAAGAGAAAATATTTAAAAGATTCAGCCTCAGGAAAGCCACCCCTGAGTACACATCATGGTAGTTTTGAGAATAAAGGAACACAACAAGCAACAAGGC ATGAGGCCATTTCTTCCAGGTCCCAAGGTTCAATTGGCAAAGTACTCACTGAGAAGGAGGATAACTGCTATGTTATTTCTGAAGAAGAACGGGCTGCTAT CGCTGCTGCAGAAGCTGCCCGTGCTAAAGCTCATGCTGCTGCTGAGGCATATGCTGCTGCAGAAGCCAGGCGCAATAAGTTGTTACAGCTTCCTAAGATA CCCTCATTCCAGAAATTTGCTTCAAAAAATGATGAATGTGATAGCAGAAAAAAGTGGTCTGGTGCTTTGGGAAGGCAAGATTGTATTTCAGAGATTGATT CGAGGAATTGTAGAGTTAGGGACTGGTCTGTTGATTTTTCTGCTGCTTGTGTTAACCTTGACAATTGTAGAATGCCAGTTGATAACCTTTCACAGAGAAG TCACTCAAATGAGATTGCCAGCCATTTGAGTTTCAGAGAGCACTCGGGAGAAAGTGTCGCTGTGGACAGCAGTATATATACAAAAGCTTGGATTGACACA GATAATGGTGTGGGAATAAAAGATTCTGATGCCATAGACAGATGGCAATCTCAAGCAGCTGCAGCTGATTCTTATTTTTCAAATCCAAGCATAAATTTGA AGGATGAGGAAGATTCAAATGCCTGTTCAAGGTTACCCATCTGGAAGCATGATGGTATGGCAAATGAGAGTTCTATTTCACAGGTTACTGTAAATAAGGA AGCCTTGAAAAGTCATTCCCGTGGAACAGATCATATCAAACAGGCTGTTGTGGATTATGTTGGCTCACTACTTATGCCCCTTTACAAAGCAAGGAAACTA GACAAGGATGGCTACAAGGCTATAATGAAGAAAAGTGCAACTAAGGTCATGGAGAAAGCCACGGATAAAGAAAAAGCTATGACTGTTGACGAGTTTCTAG ATTTTAAGCGAAAGACTAAGATTCGCTCCTTTGTGGACACATTGATTGAGAGACACATGGCAATGAAACCAGATATGAAATCTTAATGTTCCTTGTAGGG AATAGCCTGTACTTTTTGTACTGCTGCGAAGCAGTTGCTGAAGTCCGGTTCTTAATTTTTGACAGCTGTGGTCATTGACATTCTTTCTGATGAGCACCTT AGTCTGCCAATGTAAATGATCAAGAGGGGTGCCGTTGAAACAGATGAAACATCATCAATCTAGATTTGTGTGGTCACTTTGGCTGAGAAAGATTATTACG TCAGTCACAGATGGGAGGTAATAGGTATTTGGTTGGTTGTGCCCA
• Tissue: pods
• Gene name: LI_gene_194005;
• Additional information: details;

Expression of Ll_transcript_507085

FPKM

• PAB: 0.1
• PNAB: 0.7
• PS1: 0.8
• PS2: 0.8
• PS3: 0.4
• PW1: 0.8
• PW2: 0.7
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_507085

• Blastp: Lysine-specific histone demethylase 1 homolog 3 from Arabidopsis with 57.89% of identity
• Blastx: Lysine-specific histone demethylase 1 homolog 3 from Arabidopsis with 57.89% of identity
• Eggnog: amine oxidase(ENOG410XSNC)
• Kegg: Link to kegg annotations (AT4G16310)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436862.1)
• Pfam: SWIRM domain (PF04433.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;