| Id Trinity | TRINITY_DN52597_c3_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_505807 |
| Sequence | GATGTCTAGCATTCCTACTAGGATATCTCTAACTTCTGATTTATAGACAGCTTGTACAACTGAGGGTTATATTTGTTTGACTGCTCATTATGTTGATTCA ACTTGGAAGCTAAGAAGTAAAATTATCAACTTTTGTCACATGCCTCCCCCTCATACTGGATCTGAATTGTCTAAGAAGATACTTGAATTTTTGAACGAAT GGGGTATAAACAAAAAGATATTTTCTCTAACTTTAGATAATGCTTCCTCCAATGATGTCATGCAAGAGCAATTGAAAAATAAGCTTATTATGGAAAACTC ATTATTATGTGATGGACAATTCTTTCATGTACGTTGTTCTGCACACATATTGAATCTAATTGTTCAAGAGGGGTTGAAGGTAGCTAGTGATAACTTATAT AAAATCAGGGACAGCATCAAGTGTGTGAGAGGTTCAGAAGGTAGAATGCTCAAATTGATGGTATGTATTGAGAAGATAGGTGGTGTTGATGCTTCTATTG ACTTGTGTCTAGATGTTCCTACTGGGTGAAACTTTACTTATTTGATGCTTGAATTTGCTCTTATATATAAGCATGTATTTGAAAAACTCCACATGTATGA TGATAATTACAGATTTTCTACTTCGGTAGAAGAGTAGAAAAGAGCAGATAATCTATGTGTTTTTGTTGCCTTTCTAGCGTACCACAAACTTGATTTTTGG CACATCTTATCCTACTTCCAACTTGTATTTTATGCAAGTTTGGAAAATTCAATGTCTACTCTTTAATACTTTAAGAGATGAAGATGAAGTTTTGAGGAGC ATGACTAATAAGATGGTTAAGAAGTTTGAGAAATATTGGGATGATTGTAGTGTTGTGCTTGCAATGGGAGAAATTCTTGACCCAAGAGTGAATTTGGAGA CATTGAATTATTTTTGAAAGAGTTGATGATTCTACCTTCGAAACAAATTTGCAGCTAGTTAGGAGAAAATTGTATATGCTATTTGAATAATATTGTAACA CAAGTGCTCCTACTTCTATGCAAACTCTGACTTCTGATGCTCCTCAAAAGAAGGCTAAAGTTCAAGACTTAGACTATATGTTTGATAAATATTTAATAGG AACTCGATAGGCACAAGACGTAACTTGCCACAAAAACGGGAAAGTCACAACTTGATCTTTATTTGGATGAGGTATCTTTAAATTTTAAAGATAATAATGA TTTAGATGTGGTACAATGGTGGAAAGAAAATAAAAGTCGATTTCCAGAGCTATCAATTATGGCCCGTGACTTGCTTTGCATTCATATTACAATTGTTGCA TCTGAATCTGCATTTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_194018; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_505807
| Blastp | Putative AC transposase from Zea with 38.4% of identity |
|---|---|
| Blastx | Zinc finger BED domain-containing protein RICESLEEPER 2 from Oryza sativa with 38.67% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414580.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |