| Id Trinity | TRINITY_DN52599_c2_g2_i9 |
|---|---|
| Name Transcript | Ll_transcript_505340 |
| Sequence | TGTGTAATAATAACATGACTCCAAAGTTTTGTTGCTTTTCCTTCTAACTCTTCTCTCACATTCTTCTTCTACATTTGCTGAGGTTTTCTTTGAAGAGAGA TTCCAAGGTAAGCTTTGCCTCTAATAAAATCTAATATCTTGTATCATGGGTCAGTTAGTTTAGTTGATTCAATCACAATAGCTTCTAATAATAATATTGT TGATGATAAAGGTGTGTACTTTATACTATACCCATAATTATATTATGTCAATTTCTATTATCTGATCACTTTTTTCTAGTTCTACATTAATTAATGCAGT TATTTTGTAATTGTTGTAAGTATTCAGACATACAATGATGCTAAACATTATGCCATATCTGCTAAGATACCAGAGTTGAACAATAAGAACAAGACTCTGG TGATTCAGTATTCTATTAAATTTGAGCAGGATATTGAATGTGGTGGTGGTTACATCAAGCTTCTTTCTGGTTATGTTAATCAGAAGAAATTTGGTGGTGA TACTCCTTATAGGTCATTTTCTTTCTTTCTTTCATGCTTTGCAATTTTTAGATTCTTTATCTTGATATGTTGTTTGGGAAATGATCAATTCTGAAGATTG TGTAAGACTTCAGTTCATCATTTCTGAATTCTGATGATCACAATTGATACATTTTTATGTTTGGTCTGTTTCTTTTTAATCTCTCCACTAAATAATAATG CAGTATGTGATTGTCAGAAATATATGCATTTATGCAAGTATGTAGTTCCGATCAACAAAGGGCTACTCTAAAGACAAATCTGCTAACTTAGTAGACATAG GGGGCGATTCAAATAGGCTTATTGAGAGTTCCTTTGGGCTTATTAGGAAAGCTTATTTTCATAAGATTATGAAAATAGCTTATGGCTTTCCTATAAGTTT TTTTAGCTTATTTCGATAACCTTATGAAGATAAACTCATTTTAGCTTATTTCAAAAAAGTTTATAGAATACACAAGTTGTTTACTCAAATGTGCACTTAA AGTATAAATCAATAGCTATATATTTGCCCAATTGTCAATGTTCTTATGTCTTTAACATGAATTGAAGTGAAATTTCAAGTCATTTTATGCGGAAGCAATT TGTTTGTTAATGTCTATGTTAGTCTTTCACTCTATTGCGGAAAATGTATATCAGAGTCAACTGATTGGTCATGCTCTTTGCAGTTTGATGTTCGGACCAG ACTTATGTCGCTCACAGACCAAGAAGCTACATGTTATACTATCATACCAGGGGCAGAATTACCCTATTAGAAAGGATCTACAATGTGAAACAGACAAATT GACTCATTTCTATACATTTATTCTGAGGCCTGATGCCACTTATAGTGTCCCTGTCGATAATCGAGAAAGAGATTCTGGAAGCATGTACATAGATTGGGAT ATCCTTCCTCCAAAGAAAATCAAGGATGTCAATGCAAAAAAGGTCTGAGAGTTCATGTGTCAACCTGTATCTATGTCTTTTTCTTATTAGAATGATGTAA TGGTGCAATCCTGCAATGTTCTTGTTTATTACTGACTGGATCCCTAAAGTCCTATGCTCTGAAACAACTTAAACAGCATTCTATGAGATTATTTCATTGA AATACGAGAATTTTGGTTCGTTTTGCAAATCTTACATTATGTATCAGTCTACTTTTCTTGTAAAACCTTTAACTTTCTCTATTGCAGCCAATAGACTGGG ATGATAGAGAGTACATTGAAGACCCTAACGATGCCAAACCAGAGGTACTTTCTGTCCCCCGTTCCGCCCAAATCTTCCGATGTTAATGTGATTTCCCATC AAGATTGTAAGATCACAACCTTATTAGTATTTGCAGTTACATAAGAACCTTGATGATCACCTGTAGGAATTTCTATGAAAGGGTTTATTCTTCATTTCTA TTTAATTACATACTCAGATGATAATTGCCTACTACAGCTAGCCGCACTATTAGAAAATGTTGGTTTTTTTGTTGATAGAGAGGCTTTTCAATTTTCAACA GAAATCTATAAAATTATAAGCATGGATAGAAGCACTTTCAATTAATTATTCTTTTATAACACATTGTTCTTCCTATGTTTATGTTTTCATTTGAGTGCTT ATAACTGTCTTGATATGGCAGGGATATGATTCGATTCCGGCTGAAATTCCTGATCCAAAAGTCAAGGAGGTTTATGTGTTTACTACACATTTAGAATTTA AAAGATGTCAATAAATATGTTGTGGATAGTAAGCCACTACTTTTTATGCAAGACTTAATTTCGATGGGGGCTTATGAATGTTCTTTTTTCTTCAAATTTT TGTTTTAGTAGCCTGTGGACTGGGATGAAGAAGAAGATGGACTTGAAAGCCCCCGAAAATTCCTAATCCAGCATACCAAGGACCACGGAAGCGCAAGAAA ATCAAGAATCTCAACTACAAAGGAAAGTGGAAGATTCCATGGATCGACAACCCAGAATTTGAGGATGACCCTGATCTTTATATGCTGAAACCAATAAAGT ATGTGGGCATTGAAGTGTGGCAGGTGAAAGCTGGTTCAATTTTCGACAATATCTTAACTTGTGATAGCAAGGCAAGTTGTGGAAGAATTTTTGTCTGATA ACAGAGAGGAAGCACAGAGAGCTAGAGAAGAGGGTGAAAATAGGAGGAGAGAGAGGGATCATAAATATGGAGATAGGAAGAGGGATGAACTTTGAAATGT GCAGTGTCATTGTGGGTAGTTGTCCGAAGTGTGATTTGAAGCAATGTTGAATTGAATTGAATTGAATGCCATGTTTGAAGATATTTGAGTGTAGGACCAA AGGTGCAATTGCACTGTCCATGCCAAGCTGTATTAAACTGTATCATCTCACTAGATATGGGCACTACCCATTATGTTCATTTATTTTTCCATGGAATTAA AACTCACTACATTCAGATCCAAACATTTTCTGCCGGGGCGTTGGTTCAAGTGGTGCATGCTTGATTCTTCTTAAGCAAGGTCTCAGTTCGATTCTTGTGG ATGAAAAAAATATCCGCTGGGAGAGTTAGCCCTACATACCTGTGGATA BLAST |
| Tissue | pods |
| Gene name | LI_gene_194043; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_505340
| Blastp | Calreticulin-3 from Arabidopsis with 76.77% of identity |
|---|---|
| Blastx | Calreticulin-3 from Arabidopsis with 76.77% of identity |
| Eggnog | Calreticulin(ENOG410XRR7) |
| Kegg | Link to kegg annotations (AT1G08450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_004507349.1) |
| Pfam | Calreticulin family (PF00262.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |